Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 0.0e+00 1255.0 624 100.0
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 0.0e+00 1246.9 624 99.2
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.8e-305 1052.0 622 82.2
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 7.0e-297 1023.5 626 79.6
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.2e-282 975.3 626 75.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 3.3e-278 961.4 623 74.0
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 3.4e-275 951.4 625 74.1
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.7e-274 949.1 630 72.7
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.2e-273 944.9 625 74.2
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.0e-272 942.2 631 72.3
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.0e-272 942.2 630 72.1
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 4.6e-272 941.0 589 78.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 4.6e-272 941.0 627 72.4
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 3.9e-271 937.9 623 72.9
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.8e-269 931.8 628 71.5
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.2e-268 927.5 605 74.5
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 6.8e-268 927.2 627 71.1
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.2e-267 926.4 627 72.1
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.5e-267 926.0 627 70.5
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.0e-267 925.6 627 70.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 2.6e-267 925.2 627 70.3
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 9.8e-267 923.3 630 71.6
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.7e-266 922.5 671 66.8
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.2e-266 922.2 630 70.2
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 9.2e-265 916.8 606 72.9
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.6e-264 916.0 627 70.5
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.3e-263 912.9 627 70.5
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.1e-262 909.8 631 69.9
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.5e-262 908.7 627 68.7
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.1e-261 905.6 653 68.8
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 4.7e-261 904.4 622 70.1
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 1.1e-260 903.3 626 69.2
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.4e-260 902.9 620 69.8
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 3.1e-260 901.7 620 68.9
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 6.8e-260 900.6 621 68.6
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.0e-259 899.0 626 68.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.6e-259 898.7 626 68.7
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 8.3e-258 893.6 636 67.3
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 8.3e-258 893.6 627 69.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-257 892.9 626 68.2
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.6e-256 889.4 666 67.3
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 2.1e-256 889.0 622 69.5
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 3.5e-256 888.3 620 68.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 3.5e-256 888.3 627 68.9
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.0e-255 886.7 622 67.8
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.3e-255 886.3 608 70.4
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.7e-255 885.9 626 67.7
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 2.3e-255 885.6 621 67.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 8.6e-255 883.6 627 68.6
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 3.3e-254 881.7 620 67.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.5e-254 880.2 626 67.9
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 9.5e-254 880.2 621 66.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.8e-253 878.6 624 67.0
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.1e-252 876.7 615 69.3
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 6.8e-252 874.0 633 67.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.6e-251 872.1 598 70.9
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.3e-250 869.8 621 67.5
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.3e-250 869.8 629 69.0
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.6e-248 862.8 573 71.4
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 4.6e-248 861.3 634 66.9
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.6e-248 861.3 631 66.9
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 8.7e-247 857.1 630 67.0
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.5e-246 855.5 583 71.2
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.3e-246 854.7 571 72.0
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.6e-245 851.7 635 66.3
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 7.6e-243 844.0 625 64.5
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 4.2e-241 838.2 611 66.8
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 4.2e-241 838.2 628 65.4
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.2e-240 836.6 595 69.2
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 4.6e-240 834.7 623 64.7
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 6.6e-239 830.9 624 65.2
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.9e-238 829.3 625 64.0
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.6e-238 827.8 629 65.5
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 4.8e-237 824.7 596 67.4
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 6.2e-237 824.3 620 65.5
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 3.1e-236 822.0 626 62.8
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 6.9e-236 820.8 628 63.1
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 5.4e-233 811.2 634 63.4
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.2e-232 810.1 629 62.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.9e-230 802.7 625 62.7
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 7.4e-230 800.8 591 66.3
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.6e-229 799.7 625 61.9
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.8e-229 798.1 625 62.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 7.6e-227 790.8 627 61.7
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 7.6e-227 790.8 627 61.7
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.5e-225 785.8 627 63.3
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 4.2e-225 785.0 626 61.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 7.1e-217 757.7 565 64.4
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 4.8e-213 745.0 629 58.3
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.9e-210 735.7 627 58.1
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.0e-198 696.4 440 77.3
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 9.1e-188 661.0 450 70.9
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 6.5e-186 654.8 624 52.4
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.4e-180 636.3 486 64.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.6e-176 623.6 640 50.0
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 4.8e-173 612.1 453 66.0
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.7e-170 603.6 416 70.2
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.3e-162 577.4 399 69.2
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 9.2e-156 554.7 597 47.9
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.1e-151 541.2 625 45.6
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 8.3e-141 505.0 418 62.0
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 8.3e-141 505.0 400 61.5
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-122 444.5 441 55.3
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 5.6e-121 439.1 607 42.0
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 8.7e-114 415.2 762 34.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.2e-100 369.0 271 68.3
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.7e-54 217.6 175 59.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 4.1e-47 193.7 166 57.8
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 1.6e-43 181.8 163 56.4
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 5.4e-39 166.8 214 41.6
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.0e-38 163.3 153 51.0
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 4.6e-30 137.1 78 78.2
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 7.3e-20 103.2 86 64.0
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.7e-16 92.0 79 54.4
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.2e-15 87.8 87 52.9
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 9.0e-10 69.7 40 75.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 3.4e-09 67.8 47 68.1
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 2.4e-07 61.6 35 74.3
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 1.2e-06 59.3 225 26.7


User provided reference genes

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