Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F01097 Erythranthe guttata HOM05D005376 ORTHO05D006481 2.6e-150 535.4 283 100.0
MSTRG.27099 Avicennia marina HOM05D005376 ORTHO05D006481 3.4e-57 226.1 302 51.7
SalBow4G0945 Salvia bowleyana HOM05D005376 ORTHO05D006481 4.1e-55 219.2 322 49.1
Migut.F00319 Erythranthe guttata HOM05D005376 ORTHO05D006481 2.3e-53 213.4 309 50.2
Dinv35232 Davidia involucrata HOM05D005376 ORTHO05D006481 1.1e-47 194.5 268 50.0
Duzib084G0056 Durio zibethinus HOM05D005376 ORTHO05D006481 1.9e-47 193.7 276 51.1
Ciclev10005655m.g Citrus clementina HOM05D005376 ORTHO05D006481 5.4e-47 192.2 253 50.2
Oeu022600.1 Olea europaea HOM05D005376 ORTHO05D006481 1.0e-45 188.0 266 48.9
Actinidia20875 Actinidia chinensis HOM05D005376 ORTHO05D006481 3.0e-45 186.4 284 46.8
CSS0038684 Camellia sinensis var. sinensis HOM05D005376 ORTHO05D006481 3.0e-45 186.4 292 49.0
Rhsim03G0188900 Rhododendron simsii HOM05D005376 ORTHO05D006481 3.9e-45 186.0 269 47.6
RhsimUnG0027200 Rhododendron simsii HOM05D005376 ORTHO05D006481 6.6e-45 185.3 269 47.6
Gohir.A09G042000 Gossypium hirsutum HOM05D005376 ORTHO05D006481 1.1e-44 184.5 230 50.4
SGA_v2.0_scaffold44G16739 Striga asiatica HOM05D005376 ORTHO05D006481 1.9e-44 183.7 243 51.0
Duzib205G1046 Durio zibethinus HOM05D005376 ORTHO05D006481 2.5e-44 183.3 287 46.3
Lsat_1_v5_gn_9_57581 Lactuca sativa HOM05D005376 ORTHO05D006481 2.5e-44 183.3 287 45.3
Nn1g01558 Nelumbo nucifera HOM05D005376 ORTHO05D006481 9.6e-44 181.4 197 57.4
QL09p013410 Quercus lobata HOM05D005376 ORTHO05D006481 2.8e-43 179.9 279 46.2
Gohir.D09G043122 Gossypium hirsutum HOM05D005376 ORTHO05D006481 4.8e-43 179.1 238 50.0
Cfa016268 Carpinus fangiana HOM05D005376 ORTHO05D006481 6.2e-43 178.7 225 53.8
FAN10G2308 Fragaria x ananassa HOM05D005376 ORTHO05D006481 8.1e-43 178.3 245 49.4
Atru.chr1.400 Acer truncatum HOM05D005376 ORTHO05D006481 4.0e-42 176.0 246 48.0
FAN10G0028 Fragaria x ananassa HOM05D005376 ORTHO05D006481 5.3e-42 175.6 268 47.0
Aqoxy7G00281 Aquilegia oxysepala HOM05D005376 ORTHO05D006481 6.9e-42 175.3 233 51.1
Gorai.006G049600 Gossypium raimondii HOM05D005376 ORTHO05D006481 6.9e-42 175.3 247 48.6
FvH4_7g29980 Fragaria vesca HOM05D005376 ORTHO05D006481 1.5e-41 174.1 253 49.4
FAN06G2500 Fragaria x ananassa HOM05D005376 ORTHO05D006481 2.0e-41 173.7 276 47.5
FAN06G2733 Fragaria x ananassa HOM05D005376 ORTHO05D006481 2.0e-41 173.7 276 47.5
Potri.012G144300 Populus trichocarpa HOM05D005376 ORTHO05D006481 2.6e-41 173.3 271 47.6
Lj5g0000296 Lotus japonicus HOM05D005376 ORTHO05D006481 3.4e-41 172.9 235 51.1
HanXRQChr09g0252451 Helianthus annuus HOM05D005376 ORTHO05D006481 5.8e-41 172.2 179 58.7
FAN03G2197 Fragaria x ananassa HOM05D005376 ORTHO05D006481 7.6e-41 171.8 265 47.9
TWI23G0148 Tripterygium wilfordii HOM05D005376 ORTHO05D006481 1.7e-40 170.6 232 50.0
FAN01G1606 Fragaria x ananassa HOM05D005376 ORTHO05D006481 2.2e-40 170.2 270 47.0
FAN03G2430 Fragaria x ananassa HOM05D005376 ORTHO05D006481 2.2e-40 170.2 243 50.2
GSVIVG01028894001 Vitis vinifera HOM05D005376 ORTHO05D006481 2.9e-40 169.9 278 43.9
Cpa.g.sc107.83 Carica papaya HOM05D005376 ORTHO05D006481 3.8e-40 169.5 253 48.6
Potri.015G147100 Populus trichocarpa HOM05D005376 ORTHO05D006481 6.4e-40 168.7 271 46.1
Manes.14G024100 Manihot esculenta HOM05D005376 ORTHO05D006481 8.4e-40 168.3 224 52.2
Aa31LG3G8830 Aethionema arabicum HOM05D005376 ORTHO05D006481 1.1e-39 167.9 211 55.0
Glyma.10G232400 Glycine max HOM05D005376 ORTHO05D006481 4.2e-39 166.0 233 50.6
THA.LOC104825106 Tarenaya hassleriana HOM05D005376 ORTHO05D006481 4.2e-39 166.0 235 51.9
Prupe.2G298400 Prunus persica HOM05D005376 ORTHO05D006481 5.4e-39 165.6 277 45.8
BcaB01g04203 Brassica carinata HOM05D005376 ORTHO05D006481 7.1e-39 165.2 228 51.8
TWI39G0402 Tripterygium wilfordii HOM05D005376 ORTHO05D006481 7.1e-39 165.2 246 48.0
BcaB05g21960 Brassica carinata HOM05D005376 ORTHO05D006481 1.2e-38 164.5 201 52.7
Sed0004337 Sechium edule HOM05D005376 ORTHO05D006481 1.2e-38 164.5 267 48.3
Hma1.2p1_0227F.1_g096040 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 1.6e-38 164.1 278 44.6
BcaC03g14530 Brassica carinata HOM05D005376 ORTHO05D006481 2.1e-38 163.7 251 48.2
Thecc.03G181600 Theobroma cacao HOM05D005376 ORTHO05D006481 2.1e-38 163.7 275 45.1
Thhalv10014513m.g Eutrema salsugineum HOM05D005376 ORTHO05D006481 2.7e-38 163.3 257 47.5
Haze_00025 Corylus avellana HOM05D005376 ORTHO05D006481 3.5e-38 162.9 269 46.5
DCAR_009379 Daucus carota HOM05D005376 ORTHO05D006481 3.5e-38 162.9 209 50.7
Glyma.20G161700 Glycine max HOM05D005376 ORTHO05D006481 3.5e-38 162.9 213 49.8
AT5G52440 Arabidopsis thaliana HOM05D005376 ORTHO05D006481 4.6e-38 162.5 270 47.0
EL10Ac3g05591 Beta vulgaris HOM05D005376 ORTHO05D006481 6.0e-38 162.2 203 51.7
BolC2t08101H Brassica oleracea HOM05D005376 ORTHO05D006481 6.0e-38 162.2 247 48.2
AUR62021148 Chenopodium quinoa HOM05D005376 ORTHO05D006481 6.0e-38 162.2 205 50.7
COL.COLO4_28026 Corchorus olitorius HOM05D005376 ORTHO05D006481 6.0e-38 162.2 238 47.9
BcaC01g06187 Brassica carinata HOM05D005376 ORTHO05D006481 1.0e-37 161.4 185 56.8
C02p19650 Brassica napus HOM05D005376 ORTHO05D006481 1.0e-37 161.4 260 46.2
BraA02t06246Z Brassica rapa HOM05D005376 ORTHO05D006481 1.3e-37 161.0 254 46.9
Ah.13g068730 Amaranthus hybridus HOM05D005376 ORTHO05D006481 1.8e-37 160.6 208 51.0
PGR142G2432 Punica granatum HOM05D005376 ORTHO05D006481 1.8e-37 160.6 273 45.8
C03p18310 Brassica napus HOM05D005376 ORTHO05D006481 2.3e-37 160.2 202 54.0
BolC3t14229H Brassica oleracea HOM05D005376 ORTHO05D006481 2.3e-37 160.2 202 54.0
AUR62031389 Chenopodium quinoa HOM05D005376 ORTHO05D006481 2.3e-37 160.2 230 47.8
CsaV3_3G017320 Cucumis sativus L. HOM05D005376 ORTHO05D006481 2.3e-37 160.2 274 44.9
ECA233G3491 Erigeron canadensis HOM05D005376 ORTHO05D006481 2.3e-37 160.2 184 55.4
Lsat_1_v5_gn_8_6901 Lactuca sativa HOM05D005376 ORTHO05D006481 2.3e-37 160.2 231 49.4
VMungo0720G1970 Vigna mungo HOM05D005376 ORTHO05D006481 2.3e-37 160.2 211 50.7
A03p15670 Brassica napus HOM05D005376 ORTHO05D006481 3.9e-37 159.5 196 56.1
BraA03t10859Z Brassica rapa HOM05D005376 ORTHO05D006481 3.9e-37 159.5 237 50.6
Carub.0008s1254 Capsella rubella HOM05D005376 ORTHO05D006481 3.9e-37 159.5 266 44.7
Nitab4.5_0000084g0270 Nicotiana tabacum HOM05D005376 ORTHO05D006481 3.9e-37 159.5 263 47.1
Lalb_Chr06g0161271 Lupinus albus HOM05D005376 ORTHO05D006481 5.1e-37 159.1 279 44.1
Cc02_g02590 Coffea canephora HOM05D005376 ORTHO05D006481 8.7e-37 158.3 252 41.7
Eucgr.K00283 Eucalyptus grandis HOM05D005376 ORTHO05D006481 1.5e-36 157.5 274 43.4
A02p11810 Brassica napus HOM05D005376 ORTHO05D006481 1.9e-36 157.1 247 47.0
CANSAT21G2457 Cannabis sativa HOM05D005376 ORTHO05D006481 4.3e-36 156.0 267 44.6
PSO478G1134 Papaver somniferum HOM05D005376 ORTHO05D006481 4.3e-36 156.0 186 55.9
PSO782G3185 Papaver somniferum HOM05D005376 ORTHO05D006481 5.6e-36 155.6 185 55.1
RcHm_v2.0_Chr1g0377931 Rosa chinensis HOM05D005376 ORTHO05D006481 5.6e-36 155.6 196 53.6
MELO3C006928.2 Cucumis melo HOM05D005376 ORTHO05D006481 9.6e-36 154.8 287 42.9
CARHR265430 Cardamine hirsuta HOM05D005376 ORTHO05D006481 1.6e-35 154.1 262 45.4
AL8G26870 Arabidopsis lyrata HOM05D005376 ORTHO05D006481 3.7e-35 152.9 269 43.9
Oeu004115.1 Olea europaea HOM05D005376 ORTHO05D006481 8.1e-35 151.8 201 53.7
Hund04774 Selenicereus undatus HOM05D005376 ORTHO05D006481 8.1e-35 151.8 239 46.4
Sabra12G0108300 Salix brachista HOM05D005376 ORTHO05D006481 1.1e-34 151.4 286 43.7
TAR636G3226 Trochodendron aralioides HOM05D005376 ORTHO05D006481 5.3e-34 149.1 273 43.6
Sp6g14660 Schrenkiella parvula HOM05D005376 ORTHO05D006481 9.0e-34 148.3 242 47.5
CiPaw.06G001100 Carya illinoinensis HOM05D005376 ORTHO05D006481 1.5e-33 147.5 151 60.9
MBI17_g35259_MAGBIO Magnolia biondii HOM05D005376 ORTHO05D006481 2.0e-33 147.1 219 50.2
ECA232G4406 Erigeron canadensis HOM05D005376 ORTHO05D006481 2.6e-33 146.7 188 51.1
PGSC0003DMG400010161 Solanum tuberosum HOM05D005376 ORTHO05D006481 1.3e-32 144.4 236 47.0
Medtr1g100220 Medicago truncatula HOM05D005376 ORTHO05D006481 1.7e-32 144.1 178 51.7
Phvul.007G073200 Phaseolus vulgaris HOM05D005376 ORTHO05D006481 1.7e-32 144.1 144 59.7
MD07G1276100 Malus domestica HOM05D005376 ORTHO05D006481 2.2e-32 143.7 269 42.0
Psat6g193680 Pisum sativum HOM05D005376 ORTHO05D006481 2.2e-32 143.7 223 47.1
ATR0680G109 Amborella trichopoda HOM05D005376 ORTHO05D006481 4.9e-32 142.5 163 56.4
Nitab4.5_0001625g0010 Nicotiana tabacum HOM05D005376 ORTHO05D006481 1.9e-31 140.6 370 36.8
arahy.Tifrunner.gnm1.ann1.20ERFR Arachis hypogaea HOM05D005376 ORTHO05D006481 2.4e-31 140.2 157 55.4
ClCG05G008230 Citrullus lanatus HOM05D005376 ORTHO05D006481 2.4e-31 140.2 235 44.3
CDE09G0642 Ceratophyllum demersum HOM05D005376 ORTHO05D006481 5.5e-31 139.0 199 48.2
HPP92_014785 Vanilla planifolia HOM05D005376 ORTHO05D006481 9.3e-31 138.3 188 47.3
arahy.Tifrunner.gnm1.ann1.QSSI4A Arachis hypogaea HOM05D005376 ORTHO05D006481 2.7e-30 136.7 157 54.8
Manes.06G150900 Manihot esculenta HOM05D005376 ORTHO05D006481 3.5e-30 136.3 221 44.8
Actinidia34140 Actinidia chinensis HOM05D005376 ORTHO05D006481 4.6e-30 136.0 215 46.5
Sc19g0001360 Simmondsia chinensis HOM05D005376 ORTHO05D006481 1.8e-29 134.0 229 42.8
Sopen03g004140 Solanum pennellii HOM05D005376 ORTHO05D006481 1.8e-29 134.0 269 42.4
Zm00001eb085050 Zea mays HOM05D005376 ORTHO05D006481 3.9e-29 132.9 212 44.3
Zm00001eb421330 Zea mays HOM05D005376 ORTHO05D006481 5.1e-29 132.5 169 50.9
TPR.G27004 Trifolium pratense HOM05D004749 ORTHO05D005995 8.7e-29 131.7 228 43.4
CAN.G236.14 Capsicum annuum HOM05D005376 ORTHO05D006481 1.1e-28 131.3 279 40.9
Pp3c5_19450 Physcomitrium patens HOM05D005376 ORTHO05D006481 1.9e-28 130.6 162 48.8
Pp3c5_19453 Physcomitrium patens HOM05D005376 ORTHO05D006481 1.9e-28 130.6 162 48.8
Mapoly0083s0037 Marchantia polymorpha HOM05D005376 ORTHO05D006481 4.3e-28 129.4 202 43.6
Os11g0580800 Oryza sativa ssp. japonica HOM05D005376 ORTHO05D006481 4.3e-28 129.4 159 52.8
SEGI_07365 Sequoiadendron giganteum HOM05D005376 ORTHO05D006481 9.6e-28 128.3 148 51.4
Solyc03g025310.3 Solanum lycopersicum HOM05D005376 ORTHO05D006481 9.6e-28 128.3 241 41.9
MCO14G251 Micromonas commoda HOM05D005376 ORTHO05D006481 1.1e-26 124.8 94 70.2
Pp3c16_8830 Physcomitrium patens HOM05D005376 ORTHO05D006481 1.2e-25 121.3 192 44.3
Ca_10737_v3 Cicer arietinum L. HOM05D004749 ORTHO05D005995 2.6e-25 120.2 179 46.4
CBR_g49097 Chara braunii HOM05D005376 ORTHO05D006481 1.4e-23 114.4 115 58.3
AagrBONN_evm.TU.Sc2ySwM_117.3925 Anthoceros agrestis HOM05D005376 ORTHO05D006481 5.5e-23 112.5 216 38.0
SMO223G0008 Selaginella moellendorffii HOM05D005376 ORTHO05D006481 5.5e-23 112.5 74 73.0
Hund11730 Selenicereus undatus HOM05D005376 ORTHO05D006481 1.1e-20 104.8 257 35.8
HPP92_028097 Vanilla planifolia HOM05D005376 ORTHO05D006481 9.0e-18 95.1 56 85.7
PRCOL_00002629 Prasinoderma coloniale HOM05D005376 ORTHO05D006481 1.2e-17 94.7 97 51.5
Cre08.g371650 Chlamydomonas reinhardtii HOM05D005376 ORTHO05D006481 3.8e-16 89.7 104 45.2
Hma1.2p1_0044F.1_g025970 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 3.2e-15 86.7 135 42.2
Lalb_Chr02g0141171 Lupinus albus HOM05D005376 ORTHO05D006481 1.5e-12 77.8 68 63.2
Hma1.2p1_0299F.1_g117880 Hydrangea macrophylla HOM05D005376 ORTHO05D006481 5.7e-12 75.9 110 47.3
arahy.Tifrunner.gnm1.ann1.P8QCSH Arachis hypogaea HOM05D005376 ORTHO05D006481 1.8e-10 70.9 65 63.1
CiPaw.06G001400 Carya illinoinensis HOM05D005376 ORTHO05D006481 1.8e-10 70.9 114 44.7
Peaxi162Scf00057g10027 Petunia axillaris HOM05D005376 ORTHO05D006481 4.5e-09 66.2 182 34.1
ATR0665G151 Amborella trichopoda HOM05D004404 ORTHO05D005070 8.5e-08 62.0 71 43.7
Lj5g0014543 Lotus japonicus HOM05D004404 ORTHO05D005070 1.4e-07 61.2 92 38.0
Hund22096 Selenicereus undatus HOM05D004404 ORTHO05D005070 1.4e-07 61.2 79 39.2
Phvul.006G101800 Phaseolus vulgaris HOM05D004404 ORTHO05D005070 5.5e-07 59.3 123 34.1
VMungo0540G1464 Vigna mungo HOM05D004404 ORTHO05D005070 5.5e-07 59.3 73 39.7
Oeu038443.2 Olea europaea HOM05D004404 ORTHO05D005070 9.4e-07 58.5 96 34.4
ECA240G2961 Erigeron canadensis HOM05D004404 ORTHO05D005070 1.2e-06 58.2 89 36.0
ECA246G2005 Erigeron canadensis HOM05D004404 ORTHO05D005070 1.2e-06 58.2 87 35.6
vmacro13827 Vaccinium macrocarpon HOM05D004404 ORTHO05D005070 1.2e-06 58.2 124 36.3
AL7G52340 Arabidopsis lyrata HOM05D005376 ORTHO05D006481 1.6e-06 57.8 81 48.1
Cc02_g30710 Coffea canephora HOM05D004404 ORTHO05D005070 1.6e-06 57.8 87 36.8
MD12G1241300 Malus domestica HOM05D004404 ORTHO05D005070 1.6e-06 57.8 71 40.8
Medtr7g115180 Medicago truncatula HOM05D004404 ORTHO05D005070 1.6e-06 57.8 87 39.1
SEGI_08397 Sequoiadendron giganteum HOM05D004404 ORTHO05D005070 1.6e-06 57.8 93 34.4
THA.LOC104805820 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 2.7e-06 57.0 70 45.7
Ca_10045_v3 Cicer arietinum L. HOM05D004404 ORTHO05D005070 3.6e-06 56.6 93 39.8
Hma1.2p1_0083F.1_g042910 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 3.6e-06 56.6 58 48.3
MBI04_g08412_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 3.6e-06 56.6 95 36.8
arahy.Tifrunner.gnm1.ann1.Z087RK Arachis hypogaea HOM05D004404 ORTHO05D005070 4.7e-06 56.2 58 48.3
CBR_g20020 Chara braunii HOM05D004404 ORTHO05D005070 4.7e-06 56.2 68 41.2
Glyma.03G247200 Glycine max HOM05D004404 ORTHO05D005070 4.7e-06 56.2 80 41.2
Lsat_1_v5_gn_5_40280 Lactuca sativa HOM05D004404 ORTHO05D005070 4.7e-06 56.2 123 34.1
Potri.005G053400 Populus trichocarpa HOM05D004404 ORTHO05D005070 4.7e-06 56.2 87 39.1
TPR.G12949 Trifolium pratense HOM05D001346 ORTHO05D001205 4.7e-06 56.2 75 40.0
TAR362G1272 Trochodendron aralioides HOM05D004404 ORTHO05D005070 4.7e-06 56.2 72 43.1
Actinidia32805 Actinidia chinensis HOM05D004404 ORTHO05D005070 6.1e-06 55.8 72 43.1
Ciclev10002770m.g Citrus clementina HOM05D004404 ORTHO05D005070 6.1e-06 55.8 81 39.5
Migut.B01092 Erythranthe guttata HOM05D004404 ORTHO05D005070 6.1e-06 55.8 132 33.3
Psat3g007120 Pisum sativum HOM05D004404 ORTHO05D005070 6.1e-06 55.8 85 42.4
CiPaw.08G123500 Carya illinoinensis HOM05D004404 ORTHO05D005070 7.9e-06 55.5 66 43.9
Ca_09422_v3 Cicer arietinum L. HOM05D001346 ORTHO05D001205 7.9e-06 55.5 85 41.2
DCAR_006653 Daucus carota HOM05D004404 ORTHO05D005070 7.9e-06 55.5 64 45.3
Glyma.19G244900 Glycine max HOM05D004404 ORTHO05D005070 7.9e-06 55.5 114 36.8
Lj1g0028137 Lotus japonicus HOM05D004404 ORTHO05D005070 7.9e-06 55.5 72 41.7


User provided reference genes

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