Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 2.3e-232 808.5 412 100.0
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 2.1e-204 715.7 412 86.7
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 4.7e-201 704.5 413 84.7
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 4.9e-198 694.5 410 83.7
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 8.4e-198 693.7 445 79.3
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 2.7e-196 688.7 411 83.0
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 6.6e-195 684.1 412 81.8
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 1.1e-194 683.3 412 81.8
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 1.9e-194 682.6 412 81.6
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 2.5e-194 682.2 412 81.6
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 9.6e-194 680.2 412 82.3
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 2.1e-193 679.1 414 81.6
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 1.4e-192 676.4 414 81.2
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 9.0e-192 673.7 412 81.1
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 9.9e-191 670.2 412 78.2
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 9.9e-191 670.2 412 79.9
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.3e-190 669.8 412 77.9
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.2e-190 669.1 412 77.9
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 2.9e-190 668.7 412 77.7
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 2.9e-190 668.7 413 80.6
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.9e-190 668.7 412 78.2
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 1.9e-189 666.0 413 80.1
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 2.4e-189 665.6 411 79.1
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 4.2e-189 664.8 412 77.7
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 5.4e-189 664.5 412 77.7
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 5.4e-189 664.5 412 77.4
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 9.3e-189 663.7 413 78.2
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 1.2e-188 663.3 416 79.8
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 1.0e-187 660.2 412 77.4
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 1.1e-186 656.8 413 78.9
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 9.6e-186 653.7 410 77.3
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 1.3e-185 653.3 412 76.2
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 6.2e-185 651.0 412 77.4
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 1.1e-184 650.2 412 77.4
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 2.4e-184 649.0 410 77.1
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 3.1e-184 648.7 412 77.2
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 4.0e-184 648.3 410 76.3
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 4.0e-184 648.3 413 76.5
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 9.0e-184 647.1 455 72.5
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 5.8e-183 644.4 412 75.5
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.7e-182 642.9 412 76.0
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 2.2e-182 642.5 413 77.2
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 3.8e-182 641.7 412 74.8
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 4.9e-182 641.3 414 76.8
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 8.4e-182 640.6 411 76.9
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 1.1e-181 640.2 414 76.6
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 1.1e-181 640.2 412 75.5
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 1.1e-181 640.2 479 68.9
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 1.1e-181 640.2 413 75.8
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 1.9e-181 639.4 412 76.2
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 2.4e-181 639.0 412 76.5
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 4.2e-181 638.3 414 76.6
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 5.4e-181 637.9 413 76.3
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 7.1e-181 637.5 415 75.9
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 9.3e-181 637.1 416 76.7
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 9.3e-181 637.1 414 76.6
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 1.6e-180 636.3 416 76.4
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.0e-179 633.6 409 75.1
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 3.0e-179 632.1 413 77.0
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 1.9e-178 629.4 409 74.6
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 2.8e-177 625.5 413 73.6
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 4.8e-177 624.8 411 74.7
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 9.0e-176 620.5 411 74.5
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 9.0e-176 620.5 416 73.1
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 5.8e-175 617.8 415 74.5
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 5.8e-175 617.8 414 73.9
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 5.8e-175 617.8 415 74.5
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 1.3e-174 616.7 410 72.7
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 1.3e-174 616.7 415 74.0
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 1.3e-174 616.7 412 72.6
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 2.2e-174 615.9 375 80.0
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 3.8e-174 615.1 412 72.8
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 4.9e-174 614.8 417 72.4
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 4.9e-174 614.8 417 72.9
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 1.1e-173 613.6 414 73.9
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 1.4e-173 613.2 508 64.2
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 5.5e-173 611.3 412 74.3
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 7.1e-173 610.9 413 72.4
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 7.1e-173 610.9 410 73.4
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 1.6e-172 609.8 413 72.9
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 3.5e-172 608.6 417 72.2
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 7.9e-172 607.4 412 72.6
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 1.8e-171 606.3 410 72.2
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 3.9e-171 605.1 410 72.4
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 5.1e-171 604.7 410 72.0
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 8.7e-171 604.0 410 71.2
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 8.7e-171 604.0 410 71.2
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 8.7e-171 604.0 410 71.2
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.9e-170 602.8 417 72.2
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 2.5e-170 602.4 408 72.1
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 3.3e-170 602.1 414 71.5
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 4.3e-170 601.7 412 72.6
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 7.4e-170 600.9 410 71.5
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 1.3e-169 600.1 412 71.6
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 1.6e-169 599.7 412 70.6
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 2.1e-169 599.4 410 71.2
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 3.7e-169 598.6 412 70.9
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 6.2e-169 597.8 413 71.2
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 8.2e-169 597.4 410 71.0
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 1.8e-168 596.3 413 71.9
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 3.1e-168 595.5 413 71.4
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.1e-168 595.5 413 70.7
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 6.9e-168 594.3 409 70.9
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 9.0e-168 594.0 410 70.7
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 9.0e-168 594.0 413 70.7
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 2.6e-167 592.4 413 71.2
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 5.8e-167 591.3 413 71.4
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 7.6e-167 590.9 413 71.2
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.7e-166 589.7 413 71.2
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 3.8e-166 588.6 410 70.7
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 2.1e-164 582.8 466 63.9
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 1.3e-163 580.1 420 71.9
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 1.3e-161 573.5 403 72.2
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 2.2e-158 562.8 418 67.0
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 5.1e-155 551.6 429 63.4
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 7.4e-154 547.7 409 67.0
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 6.1e-148 528.1 409 64.1
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 1.1e-146 523.9 350 74.0
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 1.5e-146 523.5 306 83.3
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 4.5e-143 511.9 410 61.0
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 3.7e-137 492.3 341 71.6
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 1.1e-136 490.7 409 60.9
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 5.9e-135 485.0 348 70.1
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 2.1e-132 476.5 329 70.8
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 3.7e-129 465.7 341 69.5
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 1.8e-128 463.4 419 58.9
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 6.5e-126 454.9 418 58.9
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 1.9e-125 453.4 418 58.6
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 8.9e-107 391.3 234 80.3
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 5.4e-104 382.1 243 76.1
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 6.0e-87 325.5 431 45.0
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 6.9e-75 285.4 393 45.0
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 3.2e-72 276.6 181 74.0
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 4.5e-66 256.1 237 57.0
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 9.3e-64 248.4 329 43.5
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 5.1e-54 216.1 181 61.9
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 1.5e-50 204.5 256 51.2
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 1.4e-48 198.0 113 85.8
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 5.7e-37 159.5 219 43.8
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 3.4e-34 150.2 125 58.4
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 1.0e-30 138.7 86 74.4
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 3.3e-29 133.7 84 72.6
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 7.4e-29 132.5 79 77.2
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 1.5e-24 118.2 184 44.6
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 1.0e-22 112.1 90 62.2
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 1.4e-22 111.7 109 55.0
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 1.4e-22 111.7 109 55.0
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 5.2e-22 109.8 74 70.3
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 5.2e-22 109.8 74 70.3
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 2.0e-21 107.8 83 63.9
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 3.3e-21 107.1 74 68.9
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 6.3e-20 102.8 86 61.6
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 1.1e-19 102.1 73 64.4
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 1.5e-16 91.7 66 65.2
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 2.5e-16 90.9 81 55.6
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 8.8e-14 82.4 59 64.4
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 1.5e-13 81.6 65 58.5
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 2.2e-12 77.8 86 53.5
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 1.6e-10 71.6 112 41.1
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 2.0e-10 71.2 112 40.2


User provided reference genes

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