Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 6.1e-94 347.4 171 100.0
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 7.0e-66 254.2 170 73.5
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 8.9e-61 237.3 164 73.2
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.8e-60 234.6 172 66.9
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 2.2e-59 232.6 164 70.7
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 3.7e-59 231.9 164 70.7
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 8.3e-59 230.7 150 76.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 7.1e-58 227.6 168 69.0
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 3.5e-57 225.3 168 69.6
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 6.2e-54 214.5 151 70.9
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 3.1e-53 212.2 151 72.2
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 4.4e-52 208.4 151 67.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 2.2e-51 206.1 155 68.4
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 3.7e-51 205.3 187 59.4
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 3.7e-51 205.3 166 63.3
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.1e-50 203.8 154 66.9
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 2.4e-50 202.6 149 69.1
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 9.2e-50 200.7 128 76.6
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 2.1e-49 199.5 156 66.0
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 7.8e-49 197.6 168 60.1
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.7e-48 196.4 153 68.6
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 5.1e-48 194.9 168 61.9
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 6.6e-48 194.5 165 60.6
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 6.6e-48 194.5 163 65.0
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 6.6e-48 194.5 128 74.2
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.1e-47 193.7 120 78.3
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 1.9e-47 193.0 167 64.7
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 1.9e-47 193.0 150 67.3
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.9e-47 193.0 142 68.3
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 3.3e-47 192.2 147 66.0
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 2.1e-46 189.5 124 74.2
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 2.1e-46 189.5 118 76.3
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.1e-46 189.5 135 71.1
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 3.6e-46 188.7 163 62.6
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 4.7e-46 188.3 125 79.2
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 4.7e-46 188.3 125 78.4
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 6.2e-46 188.0 161 59.6
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 6.2e-46 188.0 163 62.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 6.2e-46 188.0 163 62.6
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 6.2e-46 188.0 123 74.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 6.2e-46 188.0 157 62.4
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 1.4e-45 186.8 159 61.0
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.4e-45 186.8 128 71.9
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.4e-45 186.8 159 62.9
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 1.8e-45 186.4 157 58.6
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 6.8e-45 184.5 109 81.7
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 1.2e-44 183.7 137 67.2
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.2e-44 183.7 159 62.3
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.2e-44 183.7 109 81.7
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.5e-44 183.3 123 73.2
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.5e-44 183.3 165 61.2
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.5e-44 183.3 131 64.9
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.6e-44 182.6 167 55.1
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 3.4e-44 182.2 118 75.4
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 3.4e-44 182.2 118 75.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 9.9e-44 180.6 156 60.3
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 2.2e-43 179.5 162 58.6
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 2.9e-43 179.1 164 57.3
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 2.9e-43 179.1 139 64.0
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 8.4e-43 177.6 107 76.6
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 8.4e-43 177.6 139 67.6
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.9e-42 176.4 139 62.6
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.9e-42 176.4 108 77.8
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 2.4e-42 176.0 139 62.6
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.4e-42 176.0 139 62.6
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.4e-42 176.0 139 62.6
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 2.4e-42 176.0 139 62.6
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 4.2e-42 175.3 157 61.8
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 7.1e-42 174.5 137 62.0
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 1.2e-41 173.7 160 56.2
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 2.1e-41 172.9 167 53.3
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 2.7e-41 172.6 109 75.2
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 3.5e-41 172.2 113 74.3
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.0e-41 171.4 158 58.2
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 6.6e-40 167.9 168 54.2
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.1e-39 167.2 163 55.2
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 7.3e-39 164.5 145 59.3
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.6e-38 162.2 99 79.8
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 4.8e-38 161.8 108 75.0
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.1e-37 160.6 110 69.1
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.8e-37 159.8 182 50.5
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 4.0e-37 158.7 133 58.6
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 2.0e-36 156.4 104 72.1
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 2.6e-36 156.0 108 67.6
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 7.6e-36 154.5 151 54.3
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 9.9e-36 154.1 175 45.7
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.7e-35 153.3 102 73.5
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 2.2e-35 152.9 157 49.7
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.9e-35 152.5 97 76.3
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.9e-35 152.5 97 76.3
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 9.3e-34 147.5 140 54.3
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.1e-33 146.4 104 70.2
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 2.7e-33 146.0 99 73.7
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.7e-32 143.3 86 75.6
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 3.0e-32 142.5 126 58.7
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.1e-31 140.6 127 56.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 4.2e-26 122.1 96 60.4
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.9e-15 86.7 73 58.9
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.6e-14 83.6 98 54.1
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.3e-11 73.9 115 37.4
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.2e-11 73.2 127 32.3
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 3.5e-09 65.9 68 54.4
Pp3c22_3530 Physcomitrium patens HOM05D007331 ORTHO05D009273 2.3e-08 63.2 151 35.8


User provided reference genes

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