Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.9e-227 791.6 402 100.0
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 2.2e-174 615.9 408 77.2
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 5.0e-171 604.7 407 76.7
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 8.2e-166 587.4 402 75.1
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 9.1e-157 557.4 409 69.7
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 9.1e-157 557.4 408 69.6
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 3.5e-156 555.4 409 69.2
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 8.0e-153 544.3 417 67.1
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 4.5e-148 528.5 391 69.6
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 5.6e-146 521.5 416 67.3
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 5.6e-146 521.5 421 64.8
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 2.8e-145 519.2 394 69.5
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 8.9e-144 514.2 396 67.7
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.0e-143 513.1 407 67.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.3e-142 510.4 433 64.2
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 6.4e-142 508.1 405 65.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 3.5e-140 502.3 394 65.2
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.0e-139 500.7 410 63.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 3.0e-139 499.2 402 64.4
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.6e-139 497.7 413 63.0
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 8.6e-139 497.7 410 62.9
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.1e-138 497.3 415 62.7
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 3.3e-138 495.7 412 61.9
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 4.3e-138 495.4 414 62.8
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 7.3e-138 494.6 392 64.0
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 7.3e-138 494.6 402 64.7
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.2e-137 493.8 399 63.9
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 2.1e-137 493.0 416 62.5
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 3.6e-137 492.3 416 62.3
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 3.6e-137 492.3 411 62.8
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 3.6e-137 492.3 414 63.0
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.8e-136 490.0 400 63.5
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.3e-136 489.6 402 64.2
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 3.1e-136 489.2 394 64.0
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 5.2e-136 488.4 361 70.1
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 8.9e-136 487.6 406 64.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.5e-135 486.9 411 62.0
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 3.4e-135 485.7 414 64.3
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.4e-135 485.3 413 64.4
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 5.8e-135 485.0 412 62.9
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 5.8e-135 485.0 414 64.3
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 5.8e-135 485.0 395 64.6
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 5.8e-135 485.0 406 62.8
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.9e-134 482.6 395 62.8
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.7e-134 482.3 415 62.2
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 4.9e-134 481.9 407 63.1
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 6.4e-134 481.5 415 61.4
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 8.3e-134 481.1 401 61.3
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 8.3e-134 481.1 395 63.8
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.4e-133 480.3 456 59.0
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.6e-132 476.9 404 61.6
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 4.6e-132 475.3 400 62.2
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.5e-130 470.3 408 62.5
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 2.1e-129 466.5 393 62.6
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 3.6e-129 465.7 428 58.2
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 6.8e-128 461.5 417 60.9
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 4.4e-127 458.8 403 61.0
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 7.5e-127 458.0 377 62.9
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.3e-126 457.2 407 58.5
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 2.2e-126 456.4 411 58.6
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 2.9e-126 456.1 409 59.2
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.9e-126 456.1 394 62.4
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 4.1e-125 452.2 407 59.0
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.2e-124 450.7 409 58.2
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 1.3e-123 447.2 397 59.9
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 5.1e-123 445.3 382 62.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 5.1e-123 445.3 427 55.5
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 7.3e-122 441.4 417 58.0
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.8e-120 436.8 336 65.2
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 3.1e-120 436.0 368 63.0
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 3.1e-120 436.0 397 58.7
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 2.0e-119 433.3 403 56.6
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 3.4e-119 432.6 357 67.2
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 5.8e-119 431.8 310 69.4
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.4e-117 427.2 407 58.2
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 9.2e-117 424.5 407 58.0
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.2e-116 424.1 416 58.7
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 4.6e-116 422.2 409 58.4
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 6.6e-115 418.3 413 55.7
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 8.6e-115 417.9 352 63.1
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.5e-114 417.2 417 52.3
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 7.3e-114 414.8 414 55.8
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 2.1e-113 413.3 355 62.8
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 2.8e-113 412.9 429 54.8
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 9.9e-111 404.4 394 56.9
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 9.9e-111 404.4 391 52.2
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.9e-109 400.2 402 53.5
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 2.3e-107 393.3 438 52.7
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 4.9e-102 375.6 351 53.8
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.3e-97 360.9 356 53.9
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 4.9e-94 349.0 324 55.2
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.2e-92 344.4 468 41.9
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 6.7e-91 338.6 397 46.1
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.5e-90 337.4 330 55.8
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.1e-88 331.3 298 59.1
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.0e-88 329.3 337 54.0
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.9e-88 328.6 339 53.7
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-87 327.0 298 58.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-87 327.0 298 58.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-87 327.0 298 58.4
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 8.4e-86 321.6 419 42.2
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.4e-80 304.3 292 55.1
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 1.8e-80 303.9 210 73.3
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 1.1e-74 284.6 284 57.4
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 2.1e-68 263.8 271 54.2
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 3.6e-68 263.1 208 66.8
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.4e-64 251.1 227 59.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 8.0e-52 208.8 603 30.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.8e-33 147.1 177 42.4
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.8e-27 127.9 132 51.5
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.3e-27 127.5 97 63.9
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 4.0e-27 126.7 203 37.4
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-21 108.6 118 49.2
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.7e-20 103.2 163 36.2
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.8e-15 85.9 73 65.8
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.8e-15 85.9 73 65.8
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.8e-15 85.9 73 65.8
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.7e-07 60.8 44 65.9
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 6.0e-07 59.7 47 57.4
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 1.7e-06 58.2 63 58.7


User provided reference genes

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