Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 0.0e+00 1132.5 599 100.0
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 3.3e-227 792.0 628 69.7
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 9.0e-209 730.7 589 70.5
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 3.9e-204 715.3 627 63.3
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 5.6e-203 711.4 622 61.9
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 4.0e-201 705.3 617 62.1
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.0e-199 700.7 623 62.8
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 6.5e-199 698.0 618 63.8
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.1e-198 697.2 642 62.3
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 1.6e-197 693.3 498 71.5
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 2.1e-197 693.0 613 62.5
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 2.1e-197 693.0 621 61.2
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 6.0e-197 691.4 614 62.4
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 2.3e-196 689.5 621 61.2
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 3.9e-196 688.7 634 60.7
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 6.7e-196 688.0 617 60.3
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 6.7e-196 688.0 517 68.1
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 6.7e-196 688.0 622 60.3
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 8.7e-196 687.6 639 62.1
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 8.7e-196 687.6 623 60.5
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.1e-195 687.2 647 59.4
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 2.5e-195 686.0 488 71.5
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.3e-195 685.6 610 62.5
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.3e-195 685.3 628 60.0
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 1.3e-194 683.7 464 73.3
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 4.8e-194 681.8 623 60.0
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 1.4e-193 680.2 448 77.5
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 3.1e-193 679.1 641 59.3
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 4.0e-193 678.7 624 61.1
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 6.9e-193 677.9 648 60.2
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 6.9e-193 677.9 628 60.4
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 3.4e-192 675.6 492 70.5
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 7.6e-192 674.5 625 62.2
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 1.0e-191 674.1 609 62.6
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 5.0e-191 671.8 637 58.2
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 6.5e-191 671.4 613 62.0
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.9e-190 669.8 497 69.6
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 5.5e-190 668.3 644 60.2
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 5.5e-190 668.3 635 60.8
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 9.3e-190 667.5 638 59.1
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 3.0e-188 662.5 400 80.2
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 6.7e-188 661.4 623 60.2
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 1.5e-187 660.2 651 59.4
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 3.1e-185 652.5 619 61.2
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 4.1e-185 652.1 657 56.2
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 5.3e-185 651.7 626 60.2
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.9e-184 648.3 517 65.8
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 5.9e-184 648.3 689 55.3
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 7.7e-184 647.9 650 58.2
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.8e-183 645.6 499 67.7
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 9.4e-182 641.0 657 56.2
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 6.1e-181 638.3 533 63.0
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 1.8e-180 636.7 396 78.3
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 3.0e-180 636.0 631 58.8
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 2.0e-179 633.3 652 57.4
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 3.3e-179 632.5 612 60.3
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 7.4e-179 631.3 642 57.0
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 1.3e-178 630.6 658 56.8
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 2.8e-178 629.4 612 57.5
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 1.1e-177 627.5 649 56.4
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 9.1e-177 624.4 625 56.3
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 2.2e-175 619.8 606 58.7
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 6.5e-175 618.2 612 58.2
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 2.1e-173 613.2 618 58.4
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 2.7e-173 612.8 628 55.1
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 1.4e-172 610.5 634 55.0
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 6.7e-172 608.2 638 55.0
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 2.0e-171 606.7 641 54.6
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 2.6e-171 606.3 634 56.2
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 1.7e-170 603.6 635 55.7
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 1.5e-168 597.0 627 55.8
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 4.5e-168 595.5 553 61.7
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.3e-167 594.0 563 59.3
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 5.0e-167 592.0 562 58.7
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 1.5e-166 590.5 417 70.7
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 1.5e-166 590.5 568 57.4
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 5.5e-166 588.6 637 52.4
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 2.6e-163 579.7 662 52.9
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 5.7e-163 578.6 625 53.8
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 9.7e-163 577.8 610 54.6
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 1.3e-162 577.4 615 54.3
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 1.9e-158 563.5 428 65.9
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 1.5e-155 553.9 576 55.6
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 3.7e-154 549.3 661 49.9
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 1.4e-153 547.4 442 64.3
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 1.0e-148 531.2 619 51.5
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 3.1e-145 519.6 359 70.2
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 8.6e-143 511.5 425 62.8
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.5e-142 510.8 440 63.2
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 3.3e-142 509.6 630 50.2
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 2.8e-141 506.5 755 45.6
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 5.9e-136 488.8 421 61.5
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 4.3e-134 482.6 577 50.1
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 5.6e-134 482.3 463 57.2
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 2.8e-133 479.9 636 47.6
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 3.6e-133 479.6 288 83.0
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 4.7e-133 479.2 492 54.5
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 6.2e-133 478.8 413 61.0
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 2.1e-125 453.8 419 54.7
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 1.5e-123 447.6 415 53.0
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 3.5e-120 436.4 294 78.6
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 1.1e-113 414.8 354 61.0
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 7.8e-112 408.7 574 45.1
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 2.3e-111 407.1 473 53.9
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 3.1e-108 396.7 583 43.9
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 2.1e-104 384.0 546 47.8
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.5e-104 383.3 492 48.2
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 5.8e-99 365.9 409 54.5
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 3.5e-96 356.7 625 41.6
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 2.1e-93 347.4 390 55.4
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 5.3e-92 342.8 422 51.7
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 6.4e-90 335.9 342 51.2
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 3.7e-85 320.1 194 82.0
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 6.2e-85 319.3 449 41.6
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 9.0e-84 315.5 413 48.4
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 9.0e-84 315.5 395 52.2
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 2.1e-77 294.3 412 48.5
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 6.5e-74 282.7 164 82.9
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 8.4e-74 282.3 162 84.0
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 1.9e-70 271.2 340 46.5
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 1.6e-69 268.1 166 78.3
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 6.9e-68 262.7 164 77.4
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 5.7e-62 243.0 540 39.1
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 2.4e-60 237.7 188 65.4
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 6.5e-58 229.6 172 65.1
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 6.1e-56 223.0 321 48.6
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.6e-51 207.6 124 80.6
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 7.2e-49 199.5 126 75.4
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 2.0e-46 191.4 421 32.8
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 6.3e-45 186.4 341 44.3
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 2.0e-43 181.4 183 55.7
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 2.7e-43 181.0 384 31.2
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.5e-43 180.6 142 64.1
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 3.2e-41 174.1 157 64.3
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.0e-39 167.5 145 59.3
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 3.7e-37 160.6 137 60.6
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.3e-37 159.8 119 68.1
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.3e-37 159.5 130 64.6
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 2.6e-30 137.9 294 37.4
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 1.3e-29 135.6 240 37.1
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 1.3e-29 135.6 240 37.1
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 3.7e-29 134.0 248 38.7
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 4.9e-29 133.7 518 22.4
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-28 131.7 86 75.6
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 2.3e-23 114.8 68 85.3
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 4.0e-23 114.0 177 44.6
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.7e-22 110.2 92 59.8
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 5.7e-22 110.2 92 59.8
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 5.7e-22 110.2 92 59.8
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 5.7e-22 110.2 92 59.8
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 9.8e-22 109.4 84 65.5
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 4.9e-21 107.1 229 33.2
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-20 103.2 90 57.8
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-20 103.2 84 60.7
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 9.2e-20 102.8 69 71.0
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 4.3e-17 94.0 110 52.7
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 8.0e-16 89.7 147 39.5
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 6.8e-15 86.7 64 60.9
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 7.5e-14 83.2 54 74.1
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 7.5e-14 83.2 237 31.6
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 2.9e-13 81.3 56 69.6
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 2.4e-12 78.2 49 67.3
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-12 76.6 227 38.3
CAN.G17.4 Capsicum annuum HOM05D003836 ORTHO05D004556 3.5e-11 74.3 213 35.2
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 4.6e-11 73.9 81 48.1
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 6.0e-11 73.6 53 71.7
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 7.8e-11 73.2 51 72.5
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 3.0e-10 71.2 46 58.7
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 3.0e-10 71.2 46 58.7
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 8.6e-10 69.7 46 56.5
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 1.5e-09 68.9 52 67.3
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 6.2e-08 63.5 36 75.0
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 6.2e-08 63.5 56 62.5
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 6.2e-08 63.5 39 74.4
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 4.0e-07 60.8 214 37.4
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 6.8e-07 60.1 40 75.0


User provided reference genes

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