Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.3e-93 345.5 168 100.0
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.0e-56 223.8 168 61.9
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.2e-51 204.1 169 59.8
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 6.5e-48 194.5 164 58.5
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 4.2e-47 191.8 177 54.8
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 2.1e-46 189.5 168 56.5
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.1e-45 184.9 142 61.3
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.4e-44 181.8 159 56.0
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.1e-42 175.3 143 58.7
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.3e-42 174.9 172 50.6
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 9.1e-42 174.1 165 49.7
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 2.0e-41 172.9 153 53.6
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 3.5e-41 172.2 109 67.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.5e-41 172.2 151 56.3
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.9e-41 171.4 172 50.0
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.9e-41 171.4 107 68.2
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 7.7e-41 171.0 136 55.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.7e-40 169.9 168 49.4
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.7e-40 169.9 153 54.9
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 2.2e-40 169.5 162 51.9
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.8e-40 168.7 168 50.0
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.8e-40 168.7 152 54.6
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 6.5e-40 167.9 171 49.1
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.5e-40 167.9 171 49.1
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 8.5e-40 167.5 155 52.3
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 1.5e-39 166.8 177 48.0
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 2.5e-39 166.0 133 55.6
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.2e-39 165.6 156 51.9
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 4.2e-39 165.2 109 64.2
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.2e-39 165.2 160 50.0
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 1.2e-38 163.7 155 52.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.1e-38 162.9 182 47.3
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.1e-38 162.9 107 64.5
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 2.1e-38 162.9 113 61.1
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 2.1e-38 162.9 135 54.1
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 3.6e-38 162.2 169 47.3
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 4.0e-37 158.7 141 54.6
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.7e-37 157.9 168 47.6
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 8.8e-37 157.5 154 51.3
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 8.8e-37 157.5 108 61.1
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.0e-36 156.4 162 46.3
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 2.6e-36 156.0 150 50.7
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 3.3e-36 155.6 124 53.2
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.2e-35 152.9 124 55.6
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.7e-35 152.1 112 59.8
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 8.2e-35 151.0 171 45.6
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 8.2e-35 151.0 178 43.8
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.1e-34 150.6 171 45.6
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.1e-34 150.6 114 56.1
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.4e-34 150.2 151 49.0
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 4.1e-34 148.7 109 62.4
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.2e-33 147.1 164 45.1
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 7.7e-33 144.4 110 56.4
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.2e-32 142.9 94 62.8
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 5.0e-32 141.7 148 48.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 8.5e-32 141.0 251 35.9
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 8.5e-32 141.0 108 56.5
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.2e-31 138.7 107 52.3
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.2e-30 137.1 154 39.6
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 3.6e-30 135.6 159 41.5
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 3.6e-30 135.6 107 54.2
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.6e-30 135.6 102 57.8
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 6.1e-30 134.8 108 51.9
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 8.0e-30 134.4 107 52.3
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 8.0e-30 134.4 108 50.9
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 8.0e-30 134.4 125 45.6
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.0e-29 134.0 140 42.9
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.4e-29 133.7 139 44.6
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.8e-29 133.3 151 43.7
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.3e-29 132.9 154 42.2
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.3e-29 132.9 106 54.7
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 2.3e-29 132.9 105 52.4
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 2.3e-29 132.9 156 42.3
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 2.3e-29 132.9 107 51.4
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.3e-29 132.9 127 44.1
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 2.3e-29 132.9 105 52.4
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 3.0e-29 132.5 115 45.2
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.0e-29 132.1 107 48.6
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 4.0e-29 132.1 274 32.8
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 5.2e-29 131.7 93 61.3
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.2e-29 131.7 135 44.4
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 6.8e-29 131.3 128 45.3
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 6.8e-29 131.3 128 45.3
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.8e-29 131.3 107 47.7
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 6.8e-29 131.3 127 44.9
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 8.8e-29 131.0 129 45.0
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 8.8e-29 131.0 127 44.9
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-28 130.6 105 51.4
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.2e-28 130.6 111 48.6
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.5e-28 130.2 150 42.7
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 1.5e-28 130.2 138 42.8
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.5e-28 130.2 116 47.4
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 2.0e-28 129.8 124 46.0
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.0e-28 129.8 105 50.5
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 2.0e-28 129.8 119 46.2
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 2.6e-28 129.4 105 51.4
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 2.6e-28 129.4 107 51.4
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 2.6e-28 129.4 107 51.4
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-28 129.4 105 51.4
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 3.4e-28 129.0 131 43.5
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 3.4e-28 129.0 105 50.5
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 3.4e-28 129.0 125 48.0
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 4.4e-28 128.6 132 44.7
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 4.4e-28 128.6 108 47.2
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 5.7e-28 128.3 108 48.1
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 5.7e-28 128.3 105 47.6
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 7.5e-28 127.9 105 50.5
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.5e-28 127.9 132 44.7
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.5e-28 127.9 105 49.5
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 7.5e-28 127.9 156 39.1
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 9.8e-28 127.5 104 51.0
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.3e-27 127.1 105 48.6
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.7e-27 126.7 165 37.0
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 1.7e-27 126.7 105 50.5
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 2.2e-27 126.3 105 50.5
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.7e-27 125.6 105 48.6
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 3.7e-27 125.6 149 39.6
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.7e-27 125.6 105 48.6
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.8e-27 125.2 105 50.5
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 6.3e-27 124.8 105 50.5
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 6.3e-27 124.8 105 48.6
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 8.3e-27 124.4 105 49.5
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.1e-26 124.0 105 48.6
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.4e-26 123.6 117 43.6
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.8e-26 123.2 105 48.6
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-26 123.2 105 49.5
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 2.4e-26 122.9 138 43.5
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 3.1e-26 122.5 104 50.0
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.1e-26 122.5 105 49.5
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 4.1e-26 122.1 100 51.0
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 4.1e-26 122.1 105 46.7
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 4.1e-26 122.1 105 48.6
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 5.4e-26 121.7 105 48.6
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.4e-26 121.7 105 47.6
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 5.4e-26 121.7 102 51.0
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 7.0e-26 121.3 153 36.6
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 7.0e-26 121.3 178 38.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 9.1e-26 120.9 106 49.1
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 9.1e-26 120.9 105 46.7
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 9.1e-26 120.9 107 46.7
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 9.1e-26 120.9 105 46.7
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 1.2e-25 120.6 126 42.1
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 1.2e-25 120.6 126 42.1
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.2e-25 120.6 107 47.7
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 1.6e-25 120.2 157 37.6
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.6e-25 120.2 105 46.7
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 2.0e-25 119.8 105 46.7
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.0e-25 119.8 105 46.7
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.0e-25 119.8 105 46.7
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 5.9e-25 118.2 105 46.7
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.3e-24 117.1 105 48.6
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 1.7e-24 116.7 105 44.8
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.9e-24 115.9 105 47.6
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 3.8e-24 115.5 105 46.7
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.5e-23 113.6 105 45.7
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 2.5e-23 112.8 62 74.2
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 7.2e-23 111.3 168 35.7
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 4.7e-22 108.6 110 40.9
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.3e-21 106.3 93 47.3
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.3e-21 106.3 124 42.7
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 5.7e-20 101.7 108 42.6
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 5.7e-20 101.7 108 42.6
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.7e-19 100.1 82 57.3
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.3e-16 89.7 58 60.3
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 2.9e-16 89.4 58 60.3
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 3.3e-15 85.9 94 47.9
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 1.6e-14 83.6 59 52.5
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 1.2e-12 77.4 98 43.9
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 3.4e-12 75.9 52 51.9
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.7e-11 73.6 93 40.9
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.2e-11 73.2 98 41.8
CSS0019058 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 8.3e-11 71.2 119 38.7
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 3.2e-10 69.3 61 52.5
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 5.4e-10 68.6 105 37.1
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 4.6e-09 65.5 48 58.3
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 1.1e-07 60.8 103 36.9
TPR.G36109 Trifolium pratense HOM05D003884 ORTHO05D004482 1.5e-07 60.5 84 41.7
HanXRQChr15g0476661 Helianthus annuus HOM05D003884 ORTHO05D004482 2.5e-07 59.7 75 41.3
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 7.3e-07 58.2 48 47.9
SGA_v2.0_scaffold13G06559 Striga asiatica HOM05D003884 ORTHO05D004482 8.0e-06 54.7 76 39.5


User provided reference genes

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