Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 6.1e-35 150.2 73 100.0
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 6.3e-32 140.2 73 90.4
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 6.3e-32 140.2 73 90.4
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 8.3e-32 139.8 73 93.2
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 8.3e-32 139.8 73 93.2
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 1.4e-31 139.0 73 90.4
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 3.1e-31 137.9 73 90.4
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 3.1e-31 137.9 73 90.4
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 3.1e-31 137.9 73 90.4
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 3.1e-31 137.9 73 90.4
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 5.3e-31 137.1 73 89.0
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 7.0e-31 136.7 73 91.8
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 7.0e-31 136.7 73 90.4
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 9.1e-31 136.3 73 89.0
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 9.1e-31 136.3 73 89.0
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 1.6e-30 135.6 73 89.0
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 2.7e-30 134.8 73 89.0
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 3.5e-30 134.4 73 89.0
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 4.5e-30 134.0 73 87.7
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 5.9e-30 133.7 73 86.3
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 1.0e-29 132.9 73 86.3
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 1.0e-29 132.9 73 84.9
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.3e-29 132.5 73 84.9
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 2.2e-29 131.7 73 87.7
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.2e-29 131.7 78 84.6
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.2e-29 131.7 78 84.6
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.2e-29 131.7 78 84.6
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 5.0e-29 130.6 73 84.9
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 1.5e-28 129.0 73 84.9
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 4.2e-28 127.5 73 83.6
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 4.2e-28 127.5 77 83.1
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 1.2e-27 125.9 73 86.3
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 3.6e-27 124.4 73 80.8
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 4.7e-27 124.0 73 82.2
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 6.1e-27 123.6 68 85.3
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 1.4e-26 122.5 73 80.8
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 1.4e-26 122.5 73 80.8
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 4.0e-26 120.9 73 79.5
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 5.2e-26 120.6 73 78.1
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 5.2e-26 120.6 73 78.1
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 5.2e-26 120.6 73 78.1
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 8.8e-26 119.8 73 79.5
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 3.4e-25 117.9 62 90.3
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 1.7e-24 115.5 64 84.4
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 2.8e-24 114.8 73 74.0
Gohir.D06G105066 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.7e-24 114.4 63 82.5
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 6.3e-24 113.6 62 88.7
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 8.3e-24 113.2 73 78.1
PGSC0003DMG400003499 Solanum tuberosum HOM05D002578 ORTHO05D005154 1.1e-23 112.8 60 86.7
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 1.4e-23 112.5 62 85.5
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 1.8e-23 112.1 62 87.1
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 3.1e-23 111.3 80 70.0
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 9.1e-23 109.8 62 87.1
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 1.6e-22 109.0 67 76.1
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 1.7e-21 105.5 62 82.3
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 2.3e-21 105.1 62 83.9
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 2.9e-21 104.8 62 80.6
Hund28761 Selenicereus undatus HOM05D002578 ORTHO05D005154 3.8e-21 104.4 73 74.0
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 1.5e-20 102.4 73 68.5
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 5.5e-20 100.5 73 67.1
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 9.5e-20 99.8 60 80.0
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 3.6e-19 97.8 55 80.0
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 4.7e-19 97.4 48 89.6
Lsat_1_v5_gn_5_168100 Lactuca sativa HOM05D002578 ORTHO05D005154 6.8e-18 93.6 73 65.8
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.4e-15 85.9 60 70.0
BraSC58t46504Z Brassica rapa HOM05D002578 ORTHO05D005154 9.2e-15 83.2 49 75.5
Potri.017G072340 Populus trichocarpa HOM05D002578 ORTHO05D005154 1.0e-13 79.7 73 61.6
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 1.3e-13 79.3 79 51.9
HanXRQChr16g0503681 Helianthus annuus HOM05D002578 ORTHO05D005154 5.0e-13 77.4 74 55.4
Lalb_Chr23g0274271 Lupinus albus HOM05D002578 ORTHO05D005154 1.5e-12 75.9 49 73.5
arahy.Tifrunner.gnm1.ann1.HB4K1E Arachis hypogaea HOM05D002578 ORTHO05D005154 4.3e-12 74.3 38 89.5
Sed0004436 Sechium edule HOM05D002578 ORTHO05D005154 2.8e-11 71.6 73 54.8
Aqoxy5G00925 Aquilegia oxysepala HOM05D002578 ORTHO05D005154 4.7e-11 70.9 42 78.6
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 6.8e-10 67.0 50 78.0
Lalb_Chr17g0337521 Lupinus albus HOM05D002578 ORTHO05D005154 1.2e-09 66.2 46 69.6
MELO3C004853.2 Cucumis melo HOM05D002578 ORTHO05D005154 2.2e-08 62.0 31 83.9
Nn4g25226 Nelumbo nucifera HOM05D002578 ORTHO05D005154 8.3e-08 60.1 27 92.6
Nn7g37550 Nelumbo nucifera HOM05D002578 ORTHO05D005154 8.3e-08 60.1 27 92.6


User provided reference genes

Program Settings