Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 5.1e-67 257.7 136 100.0
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 1.2e-57 226.5 134 88.8
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.7e-54 216.1 127 86.6
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.3e-51 205.7 127 79.5
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 3.3e-50 201.8 127 79.5
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.8e-49 198.0 166 68.7
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.4e-48 196.4 134 76.9
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.4e-48 195.7 123 78.9
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 4.0e-48 194.9 132 76.5
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 9.0e-48 193.7 121 78.5
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 1.2e-47 193.4 132 76.5
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.5e-47 193.0 134 76.1
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 4.5e-47 191.4 134 74.6
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 7.6e-47 190.7 130 75.4
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 7.6e-47 190.7 134 75.4
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 9.9e-47 190.3 137 74.5
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.7e-46 189.5 127 74.8
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.7e-46 189.5 131 74.8
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 2.2e-46 189.1 126 77.0
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 6.4e-46 187.6 123 77.2
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 6.4e-46 187.6 123 77.2
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.4e-45 186.4 127 73.2
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 7.1e-45 184.1 127 70.9
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.7e-44 182.2 128 73.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.7e-44 182.2 132 72.7
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 3.5e-44 181.8 120 75.8
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 4.6e-44 181.4 135 70.4
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 7.9e-44 180.6 125 72.8
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 2.3e-43 179.1 133 71.4
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 1.5e-42 176.4 125 70.4
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.5e-42 176.4 127 71.7
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.5e-42 176.4 131 65.6
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 1.9e-42 176.0 127 70.1
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 3.3e-42 175.3 132 68.9
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 4.3e-42 174.9 117 72.6
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 4.3e-42 174.9 132 68.9
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 5.6e-42 174.5 124 71.8
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 5.6e-42 174.5 124 71.8
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 9.6e-42 173.7 132 68.2
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 9.6e-42 173.7 132 68.2
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 2.8e-41 172.2 129 69.8
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 2.8e-41 172.2 129 71.3
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 3.7e-41 171.8 129 69.8
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.7e-41 171.8 120 72.5
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 4.8e-41 171.4 127 66.9
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 6.2e-41 171.0 133 69.2
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 8.1e-41 170.6 120 70.8
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 1.1e-40 170.2 131 67.9
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 1.8e-40 169.5 118 72.0
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 3.1e-40 168.7 131 64.9
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 9.0e-40 167.2 131 66.4
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 1.2e-39 166.8 126 68.3
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.2e-39 166.8 121 71.1
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.2e-39 166.8 135 64.4
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 1.5e-39 166.4 124 68.5
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.6e-39 165.6 165 57.6
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 5.8e-39 164.5 134 62.7
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 5.8e-39 164.5 130 65.4
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 9.9e-39 163.7 126 67.5
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 9.9e-39 163.7 128 65.6
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.7e-38 162.9 126 68.3
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 2.2e-38 162.5 126 65.9
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 2.2e-38 162.5 126 65.9
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 2.2e-38 162.5 126 65.9
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 6.4e-38 161.0 117 67.5
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 1.1e-37 160.2 117 67.5
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.4e-37 159.8 132 63.6
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 4.2e-37 158.3 134 64.2
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 7.1e-37 157.5 125 60.8
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 2.1e-36 156.0 125 62.4
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 2.7e-36 155.6 125 61.6
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 4.6e-36 154.8 125 62.4
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.0e-35 153.7 129 62.0
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 1.0e-35 153.7 118 64.4
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 1.3e-35 153.3 135 62.2
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 2.3e-35 152.5 118 64.4
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.1e-35 151.4 126 60.3
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 1.5e-34 149.8 94 75.5
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.5e-34 149.8 120 64.2
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 3.3e-34 148.7 120 63.3
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 2.8e-33 145.6 124 60.5
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 6.2e-33 144.4 123 61.0
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 6.2e-33 144.4 115 63.5
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 8.2e-33 144.1 115 62.6
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-32 143.3 130 58.5
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.4e-32 143.3 124 61.3
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 1.8e-32 142.9 134 61.2
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 6.9e-32 141.0 115 63.5
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 9.0e-32 140.6 83 81.9
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 9.0e-32 140.6 83 81.9
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 9.0e-32 140.6 109 64.2
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 2.6e-31 139.0 124 58.9
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 4.5e-31 138.3 151 49.7
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.0e-30 137.1 127 56.7
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.9e-30 135.6 94 71.3
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.2e-29 132.1 94 70.2
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.6e-28 129.8 94 69.1
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 4.6e-28 128.3 94 68.1
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.3e-27 126.7 121 55.4
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 2.4e-24 115.9 76 73.7
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 9.0e-24 114.0 133 49.6
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 3.4e-23 112.1 116 51.7
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 2.9e-22 109.0 78 67.9
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 3.8e-22 108.6 84 64.3
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 8.5e-22 107.5 90 63.3
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 8.5e-22 107.5 75 70.7
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 3.2e-21 105.5 82 62.2
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 6.7e-19 97.8 116 45.7
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 3.7e-17 92.0 93 55.9
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 2.4e-16 89.4 77 63.6
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 3.1e-16 89.0 109 45.9
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 8.5e-14 80.9 114 41.2
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 2.0e-10 69.7 39 89.7
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.7e-09 66.6 95 43.2
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 3.7e-09 65.5 55 60.0
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 4.8e-09 65.1 89 49.4


User provided reference genes

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