Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D01011 Erythranthe guttata HOM05D002908 ORTHO05D007390 7.1e-190 667.2 351 100.0
MSTRG.4742 Avicennia marina HOM05D002908 ORTHO05D007390 1.5e-168 596.3 344 86.0
SGA_v2.0_scaffold68G22970 Striga asiatica HOM05D002908 ORTHO05D007390 2.6e-168 595.5 352 87.5
Oeu000462.1 Olea europaea HOM05D002908 ORTHO05D007390 4.2e-166 588.2 348 84.2
SGA_v2.0_scaffold4G02012 Striga asiatica HOM05D002908 ORTHO05D007390 3.7e-162 575.1 351 82.1
Cc06_g20260 Coffea canephora HOM05D002908 ORTHO05D007390 3.5e-160 568.5 327 85.0
Dinv30470 Davidia involucrata HOM05D002908 ORTHO05D007390 8.5e-159 563.9 352 79.5
Nitab4.5_0009963g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 6.1e-157 557.8 348 79.3
MD09G1208200 Malus domestica HOM05D002908 ORTHO05D007390 3.0e-156 555.4 320 85.0
GSVIVG01017049001 Vitis vinifera HOM05D002908 ORTHO05D007390 3.0e-156 555.4 325 82.5
Sopen06g024840 Solanum pennellii HOM05D002908 ORTHO05D007390 5.2e-156 554.7 349 79.7
Solyc06g066570.4 Solanum lycopersicum HOM05D002908 ORTHO05D007390 6.7e-156 554.3 349 79.7
vmacro18877 Vaccinium macrocarpon HOM05D002908 ORTHO05D007390 6.7e-156 554.3 321 83.2
Ciclev10026026m.g Citrus clementina HOM05D002908 ORTHO05D007390 1.5e-155 553.1 326 82.8
CSS0023180 Camellia sinensis var. sinensis HOM05D002908 ORTHO05D007390 2.0e-155 552.7 325 82.2
CAN.G1152.12 Capsicum annuum HOM05D002908 ORTHO05D007390 2.0e-155 552.7 350 83.1
PGSC0003DMG400016501 Solanum tuberosum HOM05D002908 ORTHO05D007390 2.0e-155 552.7 349 79.4
PGR102G0394 Punica granatum HOM05D002908 ORTHO05D007390 5.7e-155 551.2 324 83.3
Cfa002106 Carpinus fangiana HOM05D002908 ORTHO05D007390 1.3e-154 550.1 327 82.6
Potri.003G051500 Populus trichocarpa HOM05D002908 ORTHO05D007390 2.2e-154 549.3 324 82.1
CANSAT56G3591 Cannabis sativa HOM05D002908 ORTHO05D007390 3.7e-154 548.5 330 81.8
Lalb_Chr01g0013051 Lupinus albus HOM05D002908 ORTHO05D007390 1.1e-153 547.0 324 83.6
TWI18G0563 Tripterygium wilfordii HOM05D002908 ORTHO05D007390 1.1e-153 547.0 324 83.3
QL05p021375 Quercus lobata HOM05D002908 ORTHO05D007390 2.4e-153 545.8 324 83.3
Actinidia32717 Actinidia chinensis HOM05D002908 ORTHO05D007390 7.0e-153 544.3 321 81.9
MD17G1189500 Malus domestica HOM05D002908 ORTHO05D007390 7.0e-153 544.3 318 83.3
Manes.11G036900 Manihot esculenta HOM05D002908 ORTHO05D007390 9.1e-153 543.9 319 83.7
Thecc.06G094700 Theobroma cacao HOM05D002908 ORTHO05D007390 9.1e-153 543.9 321 83.2
ECA234G0421 Erigeron canadensis HOM05D002908 ORTHO05D007390 1.2e-152 543.5 321 82.6
HanXRQChr12g0360831 Helianthus annuus HOM05D002908 ORTHO05D007390 2.0e-152 542.7 321 82.6
Peaxi162Scf00015g00145 Petunia axillaris HOM05D002908 ORTHO05D007390 2.0e-152 542.7 347 80.4
Nitab4.5_0000351g0020 Nicotiana tabacum HOM05D002908 ORTHO05D007390 2.7e-152 542.3 348 77.9
Potri.001G186000 Populus trichocarpa HOM05D002908 ORTHO05D007390 3.5e-152 542.0 324 81.5
Atru.chr1.3416 Acer truncatum HOM05D002908 ORTHO05D007390 4.5e-152 541.6 321 82.2
Lsat_1_v5_gn_5_131021 Lactuca sativa HOM05D002908 ORTHO05D007390 4.5e-152 541.6 319 82.1
Manes.04G131100 Manihot esculenta HOM05D002908 ORTHO05D007390 4.5e-152 541.6 325 81.5
TAR624G0208 Trochodendron aralioides HOM05D002908 ORTHO05D007390 4.5e-152 541.6 319 83.7
MBI04_g14938_MAGBIO Magnolia biondii HOM05D002908 ORTHO05D007390 5.9e-152 541.2 326 81.9
Phvul.010G147500 Phaseolus vulgaris HOM05D002908 ORTHO05D007390 5.9e-152 541.2 318 84.3
Sc15g0002180 Simmondsia chinensis HOM05D002908 ORTHO05D007390 7.7e-152 540.8 319 81.8
arahy.Tifrunner.gnm1.ann1.0NGS5F Arachis hypogaea HOM05D002908 ORTHO05D007390 1.7e-151 539.7 321 81.6
arahy.Tifrunner.gnm1.ann1.E6TYPI Arachis hypogaea HOM05D002908 ORTHO05D007390 1.7e-151 539.7 321 81.6
Glyma.08G203400 Glycine max HOM05D002908 ORTHO05D007390 1.7e-151 539.7 322 82.6
VMungo0331G0294 Vigna mungo HOM05D002908 ORTHO05D007390 1.7e-151 539.7 317 84.5
Eucgr.J02953 Eucalyptus grandis HOM05D002908 ORTHO05D007390 1.1e-150 537.0 321 81.3
Medtr8g013660 Medicago truncatula HOM05D002908 ORTHO05D007390 1.9e-150 536.2 323 83.0
Gorai.010G229600 Gossypium raimondii HOM05D002908 ORTHO05D007390 2.5e-150 535.8 321 82.2
Ca_11526_v3 Cicer arietinum L. HOM05D002908 ORTHO05D007390 3.2e-150 535.4 317 83.9
CsaV3_3G023830 Cucumis sativus L. HOM05D002908 ORTHO05D007390 5.5e-150 534.6 323 81.1
Duzib235G0543 Durio zibethinus HOM05D002908 ORTHO05D007390 5.5e-150 534.6 321 81.3
TPR.G14821 Trifolium pratense HOM05D002908 ORTHO05D007390 9.4e-150 533.9 319 83.4
COL.COLO4_30459 Corchorus olitorius HOM05D002908 ORTHO05D007390 1.2e-149 533.5 321 81.6
Glyma.07G018400 Glycine max HOM05D002908 ORTHO05D007390 1.2e-149 533.5 320 83.4
HanXRQChr04g0096211 Helianthus annuus HOM05D002908 ORTHO05D007390 2.1e-149 532.7 320 80.0
Sabra03G0027500 Salix brachista HOM05D002908 ORTHO05D007390 3.6e-149 531.9 351 75.8
FvH4_6g31910 Fragaria vesca HOM05D002908 ORTHO05D007390 8.0e-149 530.8 325 81.2
FAN14G2394 Fragaria x ananassa HOM05D002908 ORTHO05D007390 8.0e-149 530.8 325 81.2
MELO3C012977.2 Cucumis melo HOM05D002908 ORTHO05D007390 1.8e-148 529.6 331 79.2
RcHm_v2.0_Chr2g0139271 Rosa chinensis HOM05D002908 ORTHO05D007390 5.2e-148 528.1 325 80.6
FAN02G4032 Fragaria x ananassa HOM05D002908 ORTHO05D007390 8.8e-148 527.3 325 80.6
AUR62011685 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.2e-147 526.9 344 75.9
ClCG07G013190 Citrullus lanatus HOM05D002908 ORTHO05D007390 1.2e-147 526.9 318 80.8
Nn2g11662 Nelumbo nucifera HOM05D002908 ORTHO05D007390 2.0e-147 526.2 329 78.4
Aqoxy7G01537 Aquilegia oxysepala HOM05D002908 ORTHO05D007390 2.6e-147 525.8 324 78.7
THA.LOC104813553 Tarenaya hassleriana HOM05D002908 ORTHO05D007390 3.4e-147 525.4 319 79.6
FAN09G2740 Fragaria x ananassa HOM05D002908 ORTHO05D007390 5.7e-147 524.6 325 80.6
Sed0011260 Sechium edule HOM05D002908 ORTHO05D007390 5.7e-147 524.6 318 80.2
Gorai.011G073300 Gossypium raimondii HOM05D002908 ORTHO05D007390 9.8e-147 523.9 321 80.1
Duzib192G0943 Durio zibethinus HOM05D002908 ORTHO05D007390 1.7e-146 523.1 321 79.4
unitig_736.g22790 Utricularia gibba HOM05D002908 ORTHO05D007390 3.7e-146 521.9 331 77.3
Sp5g35950 Schrenkiella parvula HOM05D002908 ORTHO05D007390 4.8e-146 521.5 319 79.0
AT1G79810 Arabidopsis thaliana HOM05D002908 ORTHO05D007390 1.4e-145 520.0 324 78.4
Actinidia21691 Actinidia chinensis HOM05D002908 ORTHO05D007390 3.1e-145 518.8 318 79.9
CARHR074760 Cardamine hirsuta HOM05D002908 ORTHO05D007390 3.1e-145 518.8 322 77.3
TAR636G3411 Trochodendron aralioides HOM05D002908 ORTHO05D007390 5.4e-145 518.1 320 79.1
EL10Ac9g22051 Beta vulgaris HOM05D002908 ORTHO05D007390 9.1e-145 517.3 320 77.8
PSO566G0119 Papaver somniferum HOM05D002908 ORTHO05D007390 1.2e-144 516.9 328 78.7
PSO782G2745 Papaver somniferum HOM05D002908 ORTHO05D007390 1.2e-144 516.9 330 78.2
AL2G41740 Arabidopsis lyrata HOM05D002908 ORTHO05D007390 5.9e-144 514.6 322 77.6
BraA07t30278Z Brassica rapa HOM05D002908 ORTHO05D007390 7.7e-144 514.2 323 77.7
A07p26340 Brassica napus HOM05D002908 ORTHO05D007390 1.7e-143 513.1 323 77.4
C06p28730 Brassica napus HOM05D002908 ORTHO05D007390 2.9e-143 512.3 322 77.6
Carub.0002s2769 Capsella rubella HOM05D002908 ORTHO05D007390 2.9e-143 512.3 322 77.6
BolC6t38042H Brassica oleracea HOM05D002908 ORTHO05D007390 1.5e-142 510.0 323 77.4
Thhalv10018845m.g Eutrema salsugineum HOM05D002908 ORTHO05D007390 1.5e-142 510.0 322 77.3
SalBow7G1474 Salvia bowleyana HOM05D002908 ORTHO05D007390 3.3e-142 508.8 363 75.5
CDE05G0315 Ceratophyllum demersum HOM05D002908 ORTHO05D007390 4.2e-142 508.4 319 76.5
Rhsim08G0224800 Rhododendron simsii HOM05D002908 ORTHO05D007390 3.6e-141 505.4 350 77.4
Os05g0275700 Oryza sativa ssp. japonica HOM05D002908 ORTHO05D007390 4.7e-141 505.0 321 76.9
HPP92_002914 Vanilla planifolia HOM05D002908 ORTHO05D007390 4.7e-141 505.0 329 76.0
Hund00658 Selenicereus undatus HOM05D002908 ORTHO05D007390 6.1e-141 504.6 347 73.8
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 2.3e-140 502.7 287 85.0
AUR62016511 Chenopodium quinoa HOM05D002908 ORTHO05D007390 1.3e-138 496.9 297 81.5
Haze_16343 Corylus avellana HOM05D002908 ORTHO05D007390 5.4e-137 491.5 287 85.0
Aa31LG4G20 Aethionema arabicum HOM05D002908 ORTHO05D007390 1.2e-136 490.3 355 68.7
Hund06642 Selenicereus undatus HOM05D002908 ORTHO05D007390 1.7e-135 486.5 286 83.9
ATR0315G165 Amborella trichopoda HOM05D002908 ORTHO05D007390 2.5e-134 482.6 326 73.6
Zm00001eb031430 Zea mays HOM05D002908 ORTHO05D007390 4.7e-133 478.4 302 78.5
Lj3g0013088 Lotus japonicus HOM05D002908 ORTHO05D007390 1.4e-132 476.9 288 81.2
Sabra01G0154100 Salix brachista HOM05D002908 ORTHO05D007390 1.6e-128 463.4 320 74.1
Prupe.3G064400 Prunus persica HOM05D002908 ORTHO05D007390 1.7e-127 459.9 255 86.3
Gohir.D06G197300 Gossypium hirsutum HOM05D002908 ORTHO05D007390 2.5e-126 456.1 257 85.2
Gohir.A06G188700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.2e-125 453.8 257 84.8
DCAR_026336 Daucus carota HOM05D002908 ORTHO05D007390 3.4e-123 445.7 332 69.0
CiPaw.02G148100 Carya illinoinensis HOM05D002908 ORTHO05D007390 2.4e-121 439.5 264 79.9
Lsat_1_v5_gn_1_35361 Lactuca sativa HOM05D002908 ORTHO05D007390 2.3e-119 433.0 270 78.9
Gohir.D10G068700 Gossypium hirsutum HOM05D002908 ORTHO05D007390 9.9e-115 417.5 257 79.0
Dinv38008 Davidia involucrata HOM05D002908 ORTHO05D007390 8.9e-108 394.4 222 85.6
CiPaw.01G234600 Carya illinoinensis HOM05D002908 ORTHO05D007390 7.6e-107 391.3 231 81.8
Mapoly0052s0120 Marchantia polymorpha HOM05D002908 ORTHO05D007390 1.7e-106 390.2 322 60.2
Pp3c3_18540 Physcomitrium patens HOM05D002908 ORTHO05D007390 3.8e-106 389.0 337 59.3
SMO146G0339 Selaginella moellendorffii HOM05D002908 ORTHO05D007390 5.6e-102 375.2 321 60.4
CBR_g960 Chara braunii HOM05D002908 ORTHO05D007390 2.4e-84 316.6 310 54.2
Cpa.g.sc109.47 Carica papaya HOM05D002908 ORTHO05D007390 9.0e-84 314.7 209 76.1
Lalb_Chr25g0280041 Lupinus albus HOM05D002908 ORTHO05D007390 6.7e-79 298.5 279 60.6
SEGI_14821 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 1.5e-75 287.3 213 64.3
Gohir.A10G083732 Gossypium hirsutum HOM05D002908 ORTHO05D007390 1.8e-71 273.9 172 78.5
Psat4g199400 Pisum sativum HOM05D002908 ORTHO05D007390 6.7e-63 245.4 148 79.7
AagrBONN_evm.TU.Sc2ySwM_228.2361 Anthoceros agrestis HOM05D002908 ORTHO05D007390 2.5e-62 243.4 212 60.4
Sed0019299 Sechium edule HOM05D002908 ORTHO05D007390 1.3e-58 231.1 212 59.9
MCO16G131 Micromonas commoda HOM05D002908 ORTHO05D007390 3.3e-54 216.5 319 38.6
Lsat_1_v5_gn_1_85060 Lactuca sativa HOM05D002908 ORTHO05D007390 1.1e-49 201.4 195 56.9
Solyc03g120520.2 Solanum lycopersicum HOM05D002908 ORTHO05D007390 1.8e-47 194.1 245 45.3
PGSC0003DMG400002631 Solanum tuberosum HOM05D002908 ORTHO05D007390 9.7e-46 188.3 303 42.6
Cre17.g698800 Chlamydomonas reinhardtii HOM05D002908 ORTHO05D007390 1.3e-45 188.0 373 34.9
SEGI_00949 Sequoiadendron giganteum HOM05D002908 ORTHO05D007390 2.0e-38 164.1 103 75.7
Lj5C56G8 Lonicera japonica HOM05D002908 ORTHO05D007390 5.7e-38 162.5 232 46.6
CAN.G438.36 Capsicum annuum HOM05D002908 ORTHO05D007390 2.8e-37 160.2 114 70.2
PRCOL_00006980 Prasinoderma coloniale HOM05D000198 ORTHO05D003232 2.0e-35 154.1 320 35.6
Rhsim02G0192800 Rhododendron simsii HOM05D002908 ORTHO05D004240 9.8e-22 108.6 57 91.2
Medtr7g090350 Medicago truncatula HOM05D002908 ORTHO05D007390 1.6e-19 101.3 250 34.0
Sopen00g008760 Solanum pennellii HOM05D002908 ORTHO05D007390 2.8e-16 90.5 98 51.0
Rhsim03G0241200 Rhododendron simsii HOM05D002908 ORTHO05D050692 1.8e-15 87.8 45 88.9
Lsat_1_v5_gn_3_20480 Lactuca sativa HOM05D001398 ORTHO05D011740 2.9e-13 80.5 78 55.1
Rhsim12G0105800 Rhododendron simsii HOM05D002908 ORTHO05D340239 4.1e-12 76.6 55 67.3
Solyc12g027700.1 Solanum lycopersicum HOM05D002908 ORTHO05D050692 1.6e-08 64.7 30 90.0
Nitab4.5_0016721g0010 Nicotiana tabacum HOM05D002908 ORTHO05D283189 1.4e-07 61.6 84 52.4
Nn3g18125 Nelumbo nucifera HOM05D002908 ORTHO05D007390 1.5e-06 58.2 41 70.7


User provided reference genes

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