Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 3.3e-181 638.3 329 100.0
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 2.5e-136 489.2 339 76.1
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 2.0e-133 479.6 326 76.7
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.5e-128 463.4 309 78.3
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 2.0e-117 426.4 297 74.7
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 3.2e-115 419.1 260 80.8
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 9.2e-115 417.5 305 72.5
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 9.2e-115 417.5 297 72.7
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 7.8e-114 414.5 311 70.1
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 1.0e-113 414.1 297 71.7
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 1.7e-113 413.3 274 76.3
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 2.3e-113 412.9 302 71.2
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 3.0e-113 412.5 287 74.9
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 8.7e-113 411.0 312 69.2
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 3.3e-112 409.1 307 70.7
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 7.3e-112 407.9 295 72.2
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 9.6e-112 407.5 304 70.7
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 1.2e-111 407.1 323 67.5
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.6e-111 406.8 269 75.8
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.6e-111 406.8 294 71.1
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 1.6e-111 406.8 309 68.6
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.6e-111 406.8 262 78.2
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.1e-111 406.4 278 73.0
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 2.8e-111 406.0 307 69.4
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.6e-111 405.6 304 69.1
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 4.7e-111 405.2 304 69.4
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 4.7e-111 405.2 266 75.6
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 6.2e-111 404.8 278 72.7
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.4e-110 403.7 286 72.0
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 2.4e-110 402.9 256 77.7
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 2.4e-110 402.9 264 74.6
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.4e-110 402.9 294 70.7
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 3.1e-110 402.5 256 78.9
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 3.1e-110 402.5 256 77.0
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.0e-110 402.1 247 79.4
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 5.2e-110 401.7 274 72.3
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 5.2e-110 401.7 256 77.7
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 5.2e-110 401.7 267 74.9
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 6.9e-110 401.4 256 77.7
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 9.0e-110 401.0 276 73.6
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 1.2e-109 400.6 276 72.8
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 2.0e-109 399.8 264 74.2
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.6e-109 399.4 317 66.2
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 3.4e-109 399.1 282 69.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 3.4e-109 399.1 273 74.0
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 7.6e-109 397.9 255 74.9
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.7e-108 396.7 264 74.6
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 2.2e-108 396.4 272 71.3
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 8.4e-108 394.4 256 75.4
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 8.4e-108 394.4 259 76.1
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 1.9e-107 393.3 307 67.1
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 2.4e-107 392.9 256 77.7
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 4.2e-107 392.1 305 66.2
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 5.4e-107 391.7 291 70.4
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 9.3e-107 391.0 303 66.3
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 2.7e-106 389.4 315 65.4
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 6.0e-106 388.3 303 66.0
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 1.7e-105 386.7 258 73.3
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.0e-105 386.0 244 79.1
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 3.9e-105 385.6 303 66.3
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 3.9e-105 385.6 240 78.8
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 5.1e-105 385.2 256 75.8
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 5.1e-105 385.2 257 75.1
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 6.9e-102 374.8 249 74.3
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 9.0e-102 374.4 266 69.9
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 9.0e-102 374.4 266 70.3
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 4.5e-101 372.1 263 71.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 5.8e-101 371.7 266 70.7
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.3e-100 370.5 240 75.0
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 2.2e-100 369.8 297 66.0
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 4.2e-99 365.5 233 77.7
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 9.6e-96 354.4 296 63.9
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 9.6e-96 354.4 296 63.9
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 1.6e-95 353.6 301 62.8
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 1.6e-95 353.6 301 62.5
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 1.6e-95 353.6 301 62.5
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 1.6e-95 353.6 299 64.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 2.8e-95 352.8 272 65.8
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 2.8e-95 352.8 296 63.9
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 2.8e-95 352.8 291 64.6
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.4e-94 350.5 293 64.2
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 1.8e-94 350.1 292 63.4
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 4.0e-94 349.0 296 63.2
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 4.0e-94 349.0 302 62.6
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 4.0e-94 349.0 296 63.2
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 4.0e-94 349.0 296 62.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 5.3e-94 348.6 293 63.8
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 6.9e-94 348.2 296 62.8
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 6.9e-94 348.2 302 62.6
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 4.5e-93 345.5 225 80.0
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 1.3e-92 344.0 247 66.4
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 2.9e-92 342.8 260 63.8
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 9.3e-91 337.8 336 60.1
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 1.0e-89 334.3 212 78.8
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 3.9e-89 332.4 220 75.5
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 5.1e-89 332.0 243 68.3
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.9e-88 330.1 263 66.2
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.3e-88 329.3 258 69.8
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 5.6e-88 328.6 254 72.8
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 7.4e-88 328.2 244 73.0
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.8e-87 325.5 255 72.5
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 4.0e-86 322.4 239 69.0
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 5.8e-85 318.5 296 59.5
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 3.2e-83 312.8 253 62.8
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 4.3e-80 302.4 244 62.7
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 8.5e-76 288.1 220 68.6
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 2.5e-75 286.6 297 54.9
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 6.1e-74 282.0 197 73.6
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 1.3e-71 274.2 177 77.4
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 1.8e-70 270.4 240 58.8
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 2.7e-66 256.5 316 50.3
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 1.8e-62 243.8 253 56.1
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 4.7e-58 229.2 311 44.4
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 9.7e-56 221.5 135 83.0
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.7e-44 184.1 116 74.1
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 4.1e-38 162.9 112 70.5
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 7.0e-38 162.2 95 81.1
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 2.7e-37 160.2 118 63.6
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 9.2e-30 135.2 82 74.4
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.0e-28 129.4 85 71.8
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 5.4e-22 109.4 91 58.2
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.7e-12 77.8 64 59.4
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 3.1e-09 67.0 44 70.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 3.4e-08 63.5 45 68.9


User provided reference genes

Program Settings