Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.D00413 Erythranthe guttata HOM05D005591 ORTHO05D007131 5.4e-169 597.8 359 100.0
MSTRG.18314 Avicennia marina HOM05D005591 ORTHO05D007131 1.1e-124 450.7 370 67.3
CSS0046220 Camellia sinensis var. sinensis HOM05D005591 ORTHO05D007131 1.0e-122 444.1 372 64.5
SalBow4G1474 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.0e-122 441.8 360 68.1
SalBow4G1598 Salvia bowleyana HOM05D005591 ORTHO05D007131 5.0e-122 441.8 360 68.1
Dinv27163 Davidia involucrata HOM05D005591 ORTHO05D007131 6.7e-119 431.4 374 63.9
Oeu061431.3 Olea europaea HOM05D005591 ORTHO05D007131 1.5e-118 430.3 371 65.2
PGSC0003DMG402024734 Solanum tuberosum HOM05D005591 ORTHO05D007131 9.7e-118 427.6 376 64.4
Cfa014468 Carpinus fangiana HOM05D005591 ORTHO05D007131 4.8e-117 425.2 273 91.2
Nitab4.5_0000368g0340 Nicotiana tabacum HOM05D005591 ORTHO05D007131 1.4e-116 423.7 324 71.6
Nitab4.5_0006072g0030 Nicotiana tabacum HOM05D005591 ORTHO05D007131 3.1e-116 422.5 372 65.1
Haze_05998 Corylus avellana HOM05D005591 ORTHO05D007131 4.1e-116 422.2 273 90.1
Duzib212G0264 Durio zibethinus HOM05D005591 ORTHO05D007131 5.3e-116 421.8 373 63.0
Gorai.011G147400 Gossypium raimondii HOM05D005591 ORTHO05D007131 5.3e-116 421.8 367 63.2
SGA_v2.0_scaffold90G27691 Striga asiatica HOM05D005591 ORTHO05D007131 7.0e-116 421.4 378 61.6
Ciclev10020911m.g Citrus clementina HOM05D005591 ORTHO05D007131 9.1e-116 421.0 367 64.3
Thecc.04G188000 Theobroma cacao HOM05D005591 ORTHO05D007131 9.1e-116 421.0 320 70.6
Ca_26812_v3 Cicer arietinum L. HOM05D005591 ORTHO05D007131 1.2e-115 420.6 317 70.0
Hma1.2p1_0349F.1_g132330 Hydrangea macrophylla HOM05D005591 ORTHO05D007131 1.6e-115 420.2 322 68.3
Solyc01g100250.3 Solanum lycopersicum HOM05D005591 ORTHO05D007131 2.0e-115 419.9 378 64.3
CAN.G1648.2 Capsicum annuum HOM05D005591 ORTHO05D007131 2.7e-115 419.5 373 63.0
Haze_12970 Corylus avellana HOM05D005591 ORTHO05D007131 2.7e-115 419.5 273 88.3
TPR.G37202 Trifolium pratense HOM05D005591 ORTHO05D007131 5.9e-115 418.3 341 66.3
Psat5g221840 Pisum sativum HOM05D005591 ORTHO05D007131 7.7e-115 417.9 317 69.7
SGA_v2.0_scaffold1G00602 Striga asiatica HOM05D005591 ORTHO05D002031 7.7e-115 417.9 374 60.7
Eucgr.E02433 Eucalyptus grandis HOM05D005591 ORTHO05D007131 1.0e-114 417.5 323 75.5
Glyma.10G181900 Glycine max HOM05D005591 ORTHO05D007131 1.3e-114 417.2 323 69.3
Medtr3g005100 Medicago truncatula HOM05D005591 ORTHO05D007131 1.3e-114 417.2 321 69.5
Actinidia35920 Actinidia chinensis HOM05D005591 ORTHO05D007131 2.2e-114 416.4 322 68.6
Phvul.008G142801 Phaseolus vulgaris HOM05D005591 ORTHO05D007131 2.2e-114 416.4 319 70.2
VMungo0720G0134 Vigna mungo HOM05D005591 ORTHO05D007131 2.9e-114 416.0 322 69.9
Atru.chr7.136 Acer truncatum HOM05D005591 ORTHO05D007131 6.5e-114 414.8 321 77.6
QL05p063015 Quercus lobata HOM05D005591 ORTHO05D007131 8.5e-114 414.5 308 72.1
Lj2P1154T29 Lonicera japonica HOM05D005591 ORTHO05D007131 1.5e-113 413.7 318 68.6
Glyma.20G208100 Glycine max HOM05D005591 ORTHO05D007131 1.9e-113 413.3 324 69.1
Lj3g0022648 Lotus japonicus HOM05D005591 ORTHO05D007131 1.9e-113 413.3 326 70.2
CiPaw.01G109900 Carya illinoinensis HOM05D005591 ORTHO05D007131 2.5e-113 412.9 307 71.3
Potri.002G234400 Populus trichocarpa HOM05D005591 ORTHO05D007131 2.5e-113 412.9 371 61.5
TPR.G25529 Trifolium pratense HOM05D005591 ORTHO05D007131 2.5e-113 412.9 341 65.1
Lalb_Chr12g0209371 Lupinus albus HOM05D005591 ORTHO05D007131 3.2e-113 412.5 317 69.1
arahy.Tifrunner.gnm1.ann1.8VB164 Arachis hypogaea HOM05D005591 ORTHO05D007131 4.2e-113 412.1 316 68.4
arahy.Tifrunner.gnm1.ann1.ZABD6C Arachis hypogaea HOM05D005591 ORTHO05D007131 4.2e-113 412.1 316 68.4
Gohir.A10G133200 Gossypium hirsutum HOM05D005591 ORTHO05D007131 4.2e-113 412.1 304 71.7
CAN.G1273.6 Capsicum annuum HOM05D005591 ORTHO05D007131 5.5e-113 411.8 374 70.1
Cc11_g03530 Coffea canephora HOM05D005591 ORTHO05D007131 9.4e-113 411.0 306 79.4
TWI34G1086 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 9.4e-113 411.0 322 67.1
Hund00109 Selenicereus undatus HOM05D005591 ORTHO05D007131 2.1e-112 409.8 281 85.1
Sabra02G0178800 Salix brachista HOM05D005591 ORTHO05D007131 3.6e-112 409.1 326 66.9
PGR083G2576 Punica granatum HOM05D005591 ORTHO05D007131 4.7e-112 408.7 307 71.3
ClCG08G003960 Citrullus lanatus HOM05D005591 ORTHO05D007131 4.0e-111 405.6 333 67.0
Prupe.4G148300 Prunus persica HOM05D005591 ORTHO05D007131 5.2e-111 405.2 304 78.3
Lalb_Chr12g0205911 Lupinus albus HOM05D005591 ORTHO05D007131 8.8e-111 404.4 263 78.7
ClCG00G002040 Citrullus lanatus HOM05D005591 ORTHO05D007131 2.0e-110 403.3 366 62.3
Sc08g0001750 Simmondsia chinensis HOM05D005591 ORTHO05D007131 2.0e-110 403.3 282 84.8
TWI60G1035 Tripterygium wilfordii HOM05D005591 ORTHO05D007131 2.0e-110 403.3 322 67.1
Gorai.006G226400 Gossypium raimondii HOM05D005591 ORTHO05D007131 2.6e-110 402.9 319 66.8
MELO3C011502.2 Cucumis melo HOM05D005591 ORTHO05D007131 4.4e-110 402.1 369 62.3
CsaV3_6G003160 Cucumis sativus L. HOM05D005591 ORTHO05D007131 4.4e-110 402.1 309 69.9
Aqoxy5G02725 Aquilegia oxysepala HOM05D005591 ORTHO05D007131 5.7e-110 401.7 306 69.9
TAR375G0642 Trochodendron aralioides HOM05D005591 ORTHO05D007131 1.7e-109 400.2 284 73.9
Sed0000259 Sechium edule HOM05D005591 ORTHO05D007131 2.2e-109 399.8 361 61.8
GSVIVG01031642001 Vitis vinifera HOM05D005591 ORTHO05D007131 2.2e-109 399.8 318 67.9
Gohir.D09G202500 Gossypium hirsutum HOM05D005591 ORTHO05D007131 3.7e-109 399.1 319 66.5
MD05G1209200 Malus domestica HOM05D005591 ORTHO05D007131 4.8e-109 398.7 322 74.5
Gohir.A09G209100 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.1e-108 397.5 319 66.1
Peaxi162Scf00673g00002 Petunia axillaris HOM05D005591 ORTHO05D007131 1.8e-108 396.7 361 63.2
PSO063G3984 Papaver somniferum HOM05D005591 ORTHO05D007131 2.4e-108 396.4 270 86.3
Thhalv10008071m.g Eutrema salsugineum HOM05D005591 ORTHO05D007131 4.1e-108 395.6 325 65.5
AT1G19800 Arabidopsis thaliana HOM05D005591 ORTHO05D007131 5.4e-108 395.2 319 66.1
PSO339G5872 Papaver somniferum HOM05D005591 ORTHO05D007131 7.0e-108 394.8 270 85.9
Aa31LG7G4330 Aethionema arabicum HOM05D005591 ORTHO05D007131 9.1e-108 394.4 308 68.2
EL10Ac9g21576 Beta vulgaris HOM05D005591 ORTHO05D007131 1.2e-107 394.0 277 74.0
MD10G1195600 Malus domestica HOM05D005591 ORTHO05D007131 1.6e-107 393.7 318 75.2
C05p18230 Brassica napus HOM05D005591 ORTHO05D007131 2.7e-107 392.9 308 67.9
AUR62010234 Chenopodium quinoa HOM05D005591 ORTHO05D007131 3.5e-107 392.5 280 72.9
AUR62013219 Chenopodium quinoa HOM05D005591 ORTHO05D007131 3.5e-107 392.5 280 72.9
ECA232G4773 Erigeron canadensis HOM05D005591 ORTHO05D007131 3.5e-107 392.5 258 89.1
FAN11G3688 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.5e-107 392.5 319 74.9
THA.LOC104827705 Tarenaya hassleriana HOM05D005591 ORTHO05D007131 3.5e-107 392.5 308 67.5
FAN16G2920 Fragaria x ananassa HOM05D005591 ORTHO05D007131 4.5e-107 392.1 319 74.9
FvH4_3g16560 Fragaria vesca HOM05D005591 ORTHO05D007131 1.0e-106 391.0 319 74.6
A06p15920 Brassica napus HOM05D005591 ORTHO05D007131 1.3e-106 390.6 308 68.2
BraA06t24698Z Brassica rapa HOM05D005591 ORTHO05D007131 1.3e-106 390.6 308 68.2
AL1G32520 Arabidopsis lyrata HOM05D005591 ORTHO05D007131 1.7e-106 390.2 308 67.9
BolC5t30530H Brassica oleracea HOM05D005591 ORTHO05D007131 1.7e-106 390.2 308 67.9
Sp1g17610 Schrenkiella parvula HOM05D005591 ORTHO05D007131 1.7e-106 390.2 308 67.5
BcaB03g12900 Brassica carinata HOM05D005591 ORTHO05D007131 2.9e-106 389.4 308 67.9
Nn3g18591 Nelumbo nucifera HOM05D005591 ORTHO05D007131 2.9e-106 389.4 276 73.2
HanXRQChr10g0315741 Helianthus annuus HOM05D005591 ORTHO05D007131 3.8e-106 389.0 377 66.3
RcHm_v2.0_Chr5g0027591 Rosa chinensis HOM05D005591 ORTHO05D007131 3.8e-106 389.0 319 74.3
Carub.0001s1933 Capsella rubella HOM05D005591 ORTHO05D007131 5.0e-106 388.7 308 67.5
CANSAT78G0984 Cannabis sativa HOM05D005591 ORTHO05D007131 8.6e-106 387.9 324 73.1
Lsat_1_v5_gn_1_5881 Lactuca sativa HOM05D005591 ORTHO05D007131 1.1e-105 387.5 258 81.4
CARHR020310 Cardamine hirsuta HOM05D005591 ORTHO05D007131 1.5e-105 387.1 266 75.2
FAN21G2901 Fragaria x ananassa HOM05D005591 ORTHO05D007131 1.5e-105 387.1 319 74.6
BcaC07g38997 Brassica carinata HOM05D005591 ORTHO05D007131 2.5e-105 386.3 308 67.2
C08p19710 Brassica napus HOM05D005591 ORTHO05D007131 2.5e-105 386.3 308 67.2
BolC8t49608H Brassica oleracea HOM05D005591 ORTHO05D007131 5.5e-105 385.2 308 66.9
CDE02G1973 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 5.5e-105 385.2 277 82.3
MBI07_g20439_MAGBIO Magnolia biondii HOM05D005591 ORTHO05D007131 1.2e-104 384.0 356 61.2
Manes.16G070000 Manihot esculenta HOM05D005591 ORTHO05D007131 1.2e-104 384.0 322 64.3
ATR0681G262 Amborella trichopoda HOM05D005591 ORTHO05D007131 4.0e-103 379.0 268 72.8
COL.COLO4_08690 Corchorus olitorius HOM05D005591 ORTHO05D007131 7.0e-100 368.2 305 66.2
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 1.6e-99 367.1 261 72.0
Duzib151G0749 Durio zibethinus HOM05D005591 ORTHO05D007131 1.9e-97 360.1 242 78.1
Gohir.D10G133600 Gossypium hirsutum HOM05D005591 ORTHO05D007131 1.9e-97 360.1 367 57.5
Sopen01g043760 Solanum pennellii HOM05D005591 ORTHO05D007131 1.9e-97 360.1 342 61.7
Rhsim02G0070200 Rhododendron simsii HOM05D005591 ORTHO05D007131 3.3e-97 359.4 238 90.8
FAN25G3010 Fragaria x ananassa HOM05D005591 ORTHO05D007131 3.4e-94 349.4 319 69.9
SMO367G0743 Selaginella moellendorffii HOM05D005591 ORTHO05D007131 5.8e-94 348.6 269 67.3
SEGI_17332 Sequoiadendron giganteum HOM05D005591 ORTHO05D007131 1.3e-93 347.4 264 68.2
Zm00001eb074560 Zea mays HOM05D005591 ORTHO05D007131 1.9e-92 343.6 265 68.3
Pp3c1_16480 Physcomitrium patens HOM05D005591 ORTHO05D007131 1.7e-90 337.0 267 66.3
Os04g0553000 Oryza sativa ssp. japonica HOM05D005591 ORTHO05D007131 2.3e-90 336.7 260 68.1
Mapoly0204s0010 Marchantia polymorpha HOM05D005591 ORTHO05D007131 1.9e-89 333.6 261 66.7
BcaB07g31994 Brassica carinata HOM05D005591 ORTHO05D007131 7.3e-89 331.6 308 60.4
CBR_g24384 Chara braunii HOM05D005591 ORTHO05D007131 5.2e-87 325.5 262 63.7
HPP92_028331 Vanilla planifolia HOM05D005591 ORTHO05D007131 1.3e-85 320.9 258 77.5
Medtr3g008040 Medicago truncatula HOM05D005591 ORTHO05D007131 1.2e-83 314.3 273 63.7
AagrBONN_evm.TU.Sc2ySwM_117.3947 Anthoceros agrestis HOM05D005591 ORTHO05D007131 1.2e-80 304.3 248 66.1
Cre06.g268200 Chlamydomonas reinhardtii HOM05D005591 ORTHO05D007131 3.2e-76 289.7 252 58.7
PRCOL_00005194 Prasinoderma coloniale HOM05D005591 ORTHO05D007131 9.9e-70 268.1 252 54.8
Cpa.g.sc8.310 Carica papaya HOM05D005591 ORTHO05D007131 1.3e-64 251.1 177 76.8
CDE11G0925 Ceratophyllum demersum HOM05D005591 ORTHO05D007131 7.6e-62 241.9 148 83.8
MCO01G348 Micromonas commoda HOM05D005591 ORTHO05D007131 1.1e-60 238.0 252 50.0
unitig_22.g5460 Utricularia gibba HOM05D005591 ORTHO05D007131 2.2e-53 213.8 185 62.7
CBR_g4088 Chara braunii HOM05D005591 ORTHO05D007131 1.2e-51 208.0 146 73.3
vmacro15598 Vaccinium macrocarpon HOM05D005591 ORTHO05D007131 1.6e-51 207.6 268 51.9
unitig_22.g5461 Utricularia gibba HOM05D005591 ORTHO05D007131 2.3e-42 177.2 103 90.3
DCAR_018469 Daucus carota HOM05D005591 ORTHO05D007131 1.0e-34 151.8 103 77.7
DCAR_018470 Daucus carota HOM05D005591 ORTHO05D007131 1.0e-34 151.8 103 77.7
BraA08t34904Z Brassica rapa HOM05D005591 ORTHO05D011946 2.0e-30 137.5 79 78.5
CBR_g4089 Chara braunii HOM05D005591 ORTHO05D007131 1.9e-28 131.0 86 67.4
BcaC05g25857 Brassica carinata HOM05D005591 ORTHO05D007131 1.7e-21 107.8 63 87.3
Cc01_g18470 Coffea canephora HOM05D005591 ORTHO05D007131 9.4e-12 75.5 43 79.1
Ca_28569_v3 Cicer arietinum L. HOM05D005591 ORTHO05D149412 9.7e-09 65.5 192 24.5


User provided reference genes

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