Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 1.1e-91 340.1 190 100.0
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 3.6e-71 271.9 194 78.4
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 1.3e-68 263.5 195 79.0
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 4.1e-67 258.5 194 76.3
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 2.9e-60 235.7 192 70.3
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 6.4e-60 234.6 189 71.4
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 1.2e-58 230.3 215 66.0
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.6e-58 229.9 193 68.9
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 2.1e-58 229.6 196 72.4
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.1e-58 229.6 193 68.9
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 7.8e-58 227.6 193 68.4
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.0e-57 227.3 191 67.5
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.0e-57 227.3 191 67.5
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.7e-57 226.5 196 68.9
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 3.9e-57 225.3 194 68.6
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 3.9e-57 225.3 190 67.9
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 1.5e-56 223.4 193 68.4
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 7.3e-56 221.1 191 65.4
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 2.8e-55 219.2 190 63.2
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 8.1e-55 217.6 194 63.4
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.4e-54 216.9 191 64.4
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 5.3e-54 214.9 190 64.2
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 5.3e-54 214.9 193 65.3
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 2.0e-53 213.0 190 62.1
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 2.6e-53 212.6 194 63.4
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 5.8e-53 211.5 195 65.6
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 7.6e-53 211.1 189 63.5
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 1.7e-52 209.9 196 62.8
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 2.9e-52 209.1 195 62.1
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 6.4e-52 208.0 195 62.6
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 1.1e-51 207.2 191 62.8
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-51 206.8 191 62.3
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 1.4e-51 206.8 191 62.3
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.9e-51 206.5 188 63.8
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 1.9e-51 206.5 192 63.5
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 3.2e-51 205.7 189 63.0
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 4.2e-51 205.3 192 62.5
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 5.4e-51 204.9 191 62.3
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 7.1e-51 204.5 191 62.8
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 7.1e-51 204.5 199 62.8
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 9.3e-51 204.1 189 63.0
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 2.7e-50 202.6 192 60.9
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 6.0e-50 201.4 192 64.6
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 1.3e-49 200.3 192 62.0
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 1.7e-49 199.9 192 60.4
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 5.1e-49 198.4 191 61.3
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 1.5e-48 196.8 191 63.4
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.9e-48 196.4 197 58.9
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 1.9e-48 196.4 191 59.7
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 5.6e-48 194.9 192 59.9
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 1.6e-47 193.4 190 59.5
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 4.8e-47 191.8 191 62.3
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 8.1e-47 191.0 183 61.2
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 1.4e-46 190.3 191 58.1
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 2.4e-46 189.5 183 60.1
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 5.3e-46 188.3 189 63.0
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 5.3e-46 188.3 194 62.9
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.2e-45 187.2 193 58.5
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 4.5e-45 185.3 190 58.4
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 9.9e-45 184.1 189 61.4
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 9.9e-45 184.1 194 55.7
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 1.3e-44 183.7 191 59.2
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 1.3e-44 183.7 190 58.9
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.7e-44 183.3 194 55.2
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 6.4e-44 181.4 196 56.1
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 6.4e-44 181.4 199 57.8
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 6.4e-44 181.4 191 59.2
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 8.4e-44 181.0 196 58.2
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 8.4e-44 181.0 191 60.7
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 8.4e-44 181.0 191 57.6
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.4e-43 180.3 197 55.8
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.4e-43 180.3 173 59.0
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.4e-43 180.3 190 55.8
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 5.5e-43 178.3 184 58.2
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 7.1e-43 177.9 200 54.5
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 2.1e-42 176.4 180 57.2
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.7e-42 176.0 190 53.7
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 2.7e-42 176.0 182 57.1
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 3.5e-42 175.6 180 60.6
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 3.5e-42 175.6 192 55.7
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 3.5e-42 175.6 192 55.7
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 6.0e-42 174.9 187 57.8
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 1.8e-41 173.3 191 57.1
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.0e-41 172.6 188 54.8
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 3.9e-41 172.2 189 59.3
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 5.1e-41 171.8 191 58.6
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 5.1e-41 171.8 190 52.6
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 8.7e-41 171.0 191 59.2
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.5e-40 170.2 192 54.7
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 2.5e-40 169.5 203 52.7
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 2.1e-39 166.4 146 65.1
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 1.4e-38 163.7 190 52.6
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 2.4e-38 162.9 149 66.4
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 2.6e-37 159.5 190 52.6
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 4.5e-37 158.7 189 48.7
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.7e-36 156.8 191 50.3
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.9e-36 156.0 190 50.0
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 4.9e-36 155.2 191 52.9
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 6.5e-36 154.8 189 51.3
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 5.5e-35 151.8 200 46.0
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 5.5e-35 151.8 177 56.5
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 6.0e-34 148.3 189 48.1
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.0e-33 147.5 190 48.4
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 4.3e-32 142.1 190 49.5
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 5.7e-32 141.7 219 46.6
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.3e-31 140.6 202 45.5
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 2.1e-31 139.8 125 65.6
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 3.7e-31 139.0 200 45.0
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 4.8e-31 138.7 190 47.4
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 4.8e-31 138.7 190 47.4
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 2.6e-29 132.9 190 45.8
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 2.6e-29 132.9 185 42.7
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 2.2e-28 129.8 147 57.1
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 8.4e-28 127.9 199 43.2
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 8.4e-28 127.9 150 56.7
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 4.6e-26 122.1 197 43.1
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 4.6e-26 122.1 145 54.5
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 6.1e-26 121.7 138 55.1
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 1.8e-25 120.2 168 48.2
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.1e-24 117.5 82 70.7
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.5e-24 116.3 82 69.5
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 9.7e-24 114.4 146 50.7
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 2.2e-23 113.2 79 75.9
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 4.8e-23 112.1 79 73.4
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 6.3e-23 111.7 83 71.1
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 1.5e-21 107.1 154 46.1
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 4.2e-19 99.0 80 63.8
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 9.4e-19 97.8 110 58.2
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.0e-17 94.4 101 59.4
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 2.3e-17 93.2 87 58.6
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 4.3e-16 89.0 63 79.4
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 7.4e-16 88.2 73 60.3
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 1.3e-15 87.4 59 72.9
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 1.8e-14 83.6 85 57.6
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 1.5e-13 80.5 197 34.0
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 1.7e-12 77.0 85 50.6
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 5.5e-11 72.0 133 37.6
Actinidia26604 Actinidia chinensis HOM05D005762 ORTHO05D006823 2.7e-10 69.7 75 61.3
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 3.0e-09 66.2 90 44.4
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 5.1e-09 65.5 178 33.1


User provided reference genes

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