Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01234 Erythranthe guttata HOM05D021372 ORTHO05D020598 2.4e-55 218.8 127 100.0
Migut.N03255 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.1e-14 81.3 108 50.0
Migut.C01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.3e-12 75.1 59 67.8
Migut.C01299 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.8e-11 71.6 112 39.3
Migut.C01273 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.1e-10 68.6 111 39.6
Migut.C01282 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.9e-10 67.8 110 41.8
Migut.C01300 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-09 67.0 54 66.7
Migut.D00793 Erythranthe guttata HOM05D009846 ORTHO05D000368 7.7e-09 64.3 97 52.6
Migut.C01195 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.3e-08 63.5 114 36.8
TWI63G0496 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.8e-08 62.0 49 57.1
Atru.chr8.2404 Acer truncatum HOM05D000051 ORTHO05D000015 5.0e-08 61.6 52 55.8
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.5e-08 60.8 49 63.3
Atru.chr8.2406 Acer truncatum HOM05D000051 ORTHO05D000015 1.4e-07 60.1 41 65.9
Atru.chr8.2403 Acer truncatum HOM05D000051 ORTHO05D000015 1.9e-07 59.7 49 55.1
Migut.C01162 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-07 59.7 53 58.5
MSTRG.25442 Avicennia marina HOM05D000312 ORTHO05D000221 2.5e-07 59.3 41 65.9
BcaB01g05272 Brassica carinata HOM05D000051 ORTHO05D016813 2.5e-07 59.3 59 49.2
Migut.E01087 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.2e-07 58.9 44 65.9
Os12g0558400 Oryza sativa ssp. japonica HOM05D000312 ORTHO05D016621 3.2e-07 58.9 58 53.4
Duzib106G1684 Durio zibethinus HOM05D000051 ORTHO05D000015 4.2e-07 58.5 50 50.0
MD15G1165900 Malus domestica HOM05D000576 ORTHO05D000368 4.2e-07 58.5 40 70.0
SGA_v2.0_scaffold11G05695 Striga asiatica HOM05D000576 ORTHO05D000368 5.5e-07 58.2 57 49.1
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.5e-07 58.2 48 52.1
Actinidia37828 Actinidia chinensis HOM05D000312 ORTHO05D000493 7.2e-07 57.8 93 35.5
C03p10630 Brassica napus HOM05D000051 ORTHO05D000015 7.2e-07 57.8 59 47.5
Carub.0008s1259 Capsella rubella HOM05D000051 ORTHO05D000015 9.4e-07 57.4 64 48.4
Thhalv10015993m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 9.4e-07 57.4 57 49.1
Zm00001eb305100 Zea mays HOM05D010914 ORTHO05D012886 9.4e-07 57.4 54 51.9
Atru.chr7.2491 Acer truncatum HOM05D000051 ORTHO05D000015 1.2e-06 57.0 53 49.1
FAN05G2255 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-06 57.0 74 43.2
Gorai.002G086500 Gossypium raimondii HOM05D000051 ORTHO05D000015 1.2e-06 57.0 67 50.7
AL8G32090 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.6e-06 56.6 57 45.6
Carub.0007s1459 Capsella rubella HOM05D000051 ORTHO05D000015 1.6e-06 56.6 49 51.0
Migut.O00904 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-06 56.6 61 54.1
Thhalv10015301m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.6e-06 56.6 57 50.9
Medtr7g021630 Medicago truncatula HOM05D001243 ORTHO05D000843 1.6e-06 56.6 46 52.2
VMungo0464G1254 Vigna mungo HOM05D001243 ORTHO05D000843 1.6e-06 56.6 42 64.3
BolC3t13541H Brassica oleracea HOM05D000051 ORTHO05D016813 2.1e-06 56.2 59 47.5
Migut.J00273 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-06 56.2 45 60.0
Migut.J00790 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-06 56.2 49 55.1
QL04p018450 Quercus lobata HOM05D001396 ORTHO05D000493 2.1e-06 56.2 62 45.2
SGA_v2.0_scaffold40G15671 Striga asiatica HOM05D000576 ORTHO05D000368 2.1e-06 56.2 53 52.8
AL2G39130 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.7e-06 55.8 50 50.0
AL7G52190 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.7e-06 55.8 52 53.8
AT1G55660 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.7e-06 55.8 46 56.5
CANSAT01G1935 Cannabis sativa HOM05D000576 ORTHO05D000368 2.7e-06 55.8 48 52.1
Carub.0008s1677 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-06 55.8 48 52.1
CARHR157840 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.7e-06 55.8 52 48.1
Cpa.g.sc1313.1 Carica papaya HOM05D000051 ORTHO05D000015 2.7e-06 55.8 56 51.8
COL.COLO4_05517 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.7e-06 55.8 47 51.1
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.7e-06 55.8 51 60.8
Thhalv10006462m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.7e-06 55.8 43 60.5
FAN05G5209 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.7e-06 55.8 74 41.9
Prupe.7G249000 Prunus persica HOM05D000576 ORTHO05D000368 2.7e-06 55.8 44 56.8
Carub.0002s1371 Capsella rubella HOM05D004895 ORTHO05D003385 3.6e-06 55.5 48 45.8
Carub.0005s1520 Capsella rubella HOM05D000051 ORTHO05D000015 3.6e-06 55.5 59 45.8
Ciclev10015410m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.6e-06 55.5 64 46.9
Migut.B01302 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.6e-06 55.5 55 50.9
Migut.J01178 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.6e-06 55.5 55 50.9
Glyma.20G215600 Glycine max HOM05D001243 ORTHO05D000843 3.6e-06 55.5 49 51.0
Os06g0691900 Oryza sativa ssp. japonica HOM05D021372 ORTHO05D020598 3.6e-06 55.5 45 55.6
TWI77G0108 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.6e-06 55.5 48 47.9
Aa31LG7G1950 Aethionema arabicum HOM05D000051 ORTHO05D000015 4.7e-06 55.1 53 54.7
AL1G63730 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.7e-06 55.1 58 44.8
Carub.0007s2694 Capsella rubella HOM05D000051 ORTHO05D000015 4.7e-06 55.1 67 43.3
COL.COLO4_02841 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.7e-06 55.1 42 52.4
Migut.E01086 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 39 69.2
Migut.J00217 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 43 60.5
FAN14G1913 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.7e-06 55.1 71 42.3
Glyma.13G283500 Glycine max HOM05D008030 ORTHO05D003385 4.7e-06 55.1 68 44.1
Gohir.D01G064975 Gossypium hirsutum HOM05D000051 ORTHO05D000015 4.7e-06 55.1 67 49.3
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 4.7e-06 55.1 43 60.5
MD02G1023100 Malus domestica HOM05D000576 ORTHO05D000368 4.7e-06 55.1 40 65.0
Psat6g174520 Pisum sativum HOM05D001243 ORTHO05D000843 4.7e-06 55.1 44 59.1
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 4.7e-06 55.1 65 44.6
AL5G28950 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.1e-06 54.7 50 50.0
Carub.0006s3327 Capsella rubella HOM05D000051 ORTHO05D000015 6.1e-06 54.7 47 57.4
COL.COLO4_31621 Corchorus olitorius HOM05D010825 ORTHO05D012667 6.1e-06 54.7 49 55.1
DCAR_028099 Daucus carota HOM05D000051 ORTHO05D000015 6.1e-06 54.7 53 49.1
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 6.1e-06 54.7 53 47.2
Migut.G01314 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.1e-06 54.7 51 52.9
Migut.J00678 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.1e-06 54.7 59 44.1
Gohir.A01G077700 Gossypium hirsutum HOM05D000051 ORTHO05D000015 6.1e-06 54.7 65 50.8
MBI14_g46379_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 6.1e-06 54.7 40 57.5
MBI14_g47232_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D015704 6.1e-06 54.7 40 57.5
Medtr2g072730 Medicago truncatula HOM05D000051 ORTHO05D000015 6.1e-06 54.7 61 44.3
EL10Ac9g20900 Beta vulgaris HOM05D000576 ORTHO05D000368 7.9e-06 54.3 51 54.9
CARHR017440 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.9e-06 54.3 61 45.9
CARHR233690 Cardamine hirsuta HOM05D000051 ORTHO05D000015 7.9e-06 54.3 58 48.3
Cpa.g.sc130.40 Carica papaya HOM05D000051 ORTHO05D000015 7.9e-06 54.3 52 51.9
Os06g0110400 Oryza sativa ssp. japonica HOM05D021372 ORTHO05D020598 7.9e-06 54.3 45 55.6
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 7.9e-06 54.3 62 45.2
RcHm_v2.0_Chr4g0417371 Rosa chinensis HOM05D000051 ORTHO05D000015 7.9e-06 54.3 49 51.0
SGA_v2.0_scaffold196G40959 Striga asiatica HOM05D000576 ORTHO05D000368 7.9e-06 54.3 52 50.0
TWI63G0418 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.9e-06 54.3 53 52.8


User provided reference genes

Program Settings