Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C01070 Erythranthe guttata HOM05D000237 ORTHO05D006530 0.0e+00 2931.0 1589 100.0
SalBow7G1767 Salvia bowleyana HOM05D000237 ORTHO05D006530 0.0e+00 1085.9 1632 48.3
SalBow7G2018 Salvia bowleyana HOM05D000237 ORTHO05D006530 9.2e-277 958.0 1460 46.0
SGA_v2.0_scaffold52G18914 Striga asiatica HOM05D000237 ORTHO05D006530 3.5e-244 849.7 1691 42.6
GSVIVG01008802001 Vitis vinifera HOM05D000237 ORTHO05D006530 1.2e-164 585.5 1829 33.4
CSS0037931 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D006530 8.3e-161 572.8 1855 33.6
CiPaw.15G030900 Carya illinoinensis HOM05D000237 ORTHO05D006530 2.2e-153 548.1 1879 33.5
Atru.chr13.1586 Acer truncatum HOM05D000237 ORTHO05D006530 3.0e-150 537.7 821 51.2
TAR628G1620 Trochodendron aralioides HOM05D000237 ORTHO05D006530 5.0e-150 537.0 1779 33.8
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.9e-149 535.0 1746 35.3
Prupe.1G489000 Prunus persica HOM05D000237 ORTHO05D006530 3.6e-148 530.8 793 48.9
Dinv14699 Davidia involucrata HOM05D000237 ORTHO05D006530 4.7e-148 530.4 769 52.4
Cc10_g13690 Coffea canephora HOM05D000237 ORTHO05D006530 2.3e-147 528.1 1782 34.7
Cfa018423 Carpinus fangiana HOM05D000237 ORTHO05D001145 7.5e-146 523.1 855 48.9
Actinidia21273 Actinidia chinensis HOM05D000237 ORTHO05D006530 1.2e-143 515.8 1780 34.5
Rhsim06G0089600 Rhododendron simsii HOM05D000237 ORTHO05D006530 1.6e-143 515.4 808 48.3
Haze_17641 Corylus avellana HOM05D000237 ORTHO05D006530 1.5e-141 508.8 1884 33.0
Dinv27266 Davidia involucrata HOM05D000237 ORTHO05D006530 3.6e-140 504.2 1643 32.9
Nitab4.5_0003485g0030 Nicotiana tabacum HOM05D000237 ORTHO05D006530 3.1e-139 501.1 805 49.9
Hma1.2p1_0880F.1_g231830 Hydrangea macrophylla HOM05D000237 ORTHO05D006530 1.2e-138 499.2 733 50.9
MD15G1133400 Malus domestica HOM05D000237 ORTHO05D006530 2.0e-138 498.4 971 43.0
QL09p032246 Quercus lobata HOM05D000237 ORTHO05D006530 4.4e-138 497.3 931 43.9
Sabra02G0061100 Salix brachista HOM05D000237 ORTHO05D006530 1.9e-136 491.9 839 47.0
FAN24G1388 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.2e-135 489.2 857 44.8
Gohir.D05G240100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 3.5e-135 487.6 961 43.5
FvH4_2g27950 Fragaria vesca HOM05D000237 ORTHO05D006530 4.6e-135 487.3 857 44.8
Thecc.08G133600 Theobroma cacao HOM05D000237 ORTHO05D006530 4.6e-135 487.3 888 45.3
Sopen04g025850 Solanum pennellii HOM05D000237 ORTHO05D006530 3.9e-134 484.2 1742 33.1
FAN20G2323 Fragaria x ananassa HOM05D000237 ORTHO05D006530 6.6e-134 483.4 860 44.5
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 1.1e-133 482.6 860 44.7
Gohir.A05G238100 Gossypium hirsutum HOM05D000237 ORTHO05D006530 1.5e-133 482.3 978 42.9
Potri.005G182900 Populus trichocarpa HOM05D000237 ORTHO05D006530 4.3e-133 480.7 951 43.0
Solyc04g057990.4 Solanum lycopersicum HOM05D000237 ORTHO05D006530 1.2e-132 479.2 918 45.2
TWI32G0010 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 1.2e-132 479.2 871 44.8
Ciclev10000009m.g Citrus clementina HOM05D000237 ORTHO05D006530 2.1e-132 478.4 818 46.8
RcHm_v2.0_Chr6g0296771 Rosa chinensis HOM05D000237 ORTHO05D006530 2.8e-132 478.0 854 45.0
Peaxi162Scf00066g00427 Petunia axillaris HOM05D000237 ORTHO05D006530 3.6e-132 477.6 814 46.3
Gorai.009G249000 Gossypium raimondii HOM05D000237 ORTHO05D006530 3.1e-131 474.6 985 38.2
Nn5g28444 Nelumbo nucifera HOM05D000237 ORTHO05D006530 5.2e-131 473.8 892 45.4
Duzib093G2205 Durio zibethinus HOM05D000237 ORTHO05D006530 1.5e-130 472.2 902 44.7
COL.COLO4_07934 Corchorus olitorius HOM05D000237 ORTHO05D006530 3.4e-130 471.1 788 47.7
Ca_12643_v3 Cicer arietinum L. HOM05D000237 ORTHO05D001145 3.8e-129 467.6 1029 40.2
Potri.002G077700 Populus trichocarpa HOM05D000237 ORTHO05D006530 2.4e-128 464.9 1022 40.2
VMungo0647G1100 Vigna mungo HOM05D000237 ORTHO05D006530 3.2e-128 464.5 915 42.8
Phvul.001G067600 Phaseolus vulgaris HOM05D000237 ORTHO05D006530 1.2e-127 462.6 924 43.0
FAN27G0451 Fragaria x ananassa HOM05D000237 ORTHO05D006530 2.1e-127 461.8 858 43.4
Glyma.13G034600 Glycine max HOM05D000237 ORTHO05D006530 2.1e-127 461.8 832 44.6
Eucgr.E01003 Eucalyptus grandis HOM05D000237 ORTHO05D006530 4.6e-127 460.7 801 47.1
COL.COLO4_07936 Corchorus olitorius HOM05D000237 ORTHO05D006530 1.7e-126 458.8 768 48.2
TPR.G30554 Trifolium pratense HOM05D000237 ORTHO05D006530 3.9e-126 457.6 808 44.3
TWI34G0547 Tripterygium wilfordii HOM05D000237 ORTHO05D006530 8.7e-126 456.4 1723 32.3
Lalb_Chr04g0253551 Lupinus albus HOM05D000237 ORTHO05D006530 1.5e-125 455.7 802 45.1
Glyma.14G155900 Glycine max HOM05D000237 ORTHO05D006530 9.6e-125 453.0 831 44.6
Medtr1g029710 Medicago truncatula HOM05D000237 ORTHO05D006530 6.9e-123 446.8 1025 39.3
Nitab4.5_0000317g0120 Nicotiana tabacum HOM05D000237 ORTHO05D006530 2.0e-122 445.3 878 45.0
Duzib116G0766 Durio zibethinus HOM05D000237 ORTHO05D006530 1.9e-120 438.7 893 46.2
PGR044G0116 Punica granatum HOM05D000237 ORTHO05D006530 3.2e-120 438.0 942 44.2
CANSAT25G1894 Cannabis sativa HOM05D000237 ORTHO05D006530 4.2e-120 437.6 935 42.9
Lj1g0018506 Lotus japonicus HOM05D000237 ORTHO05D006530 4.2e-120 437.6 837 44.7
Psat6g040880 Pisum sativum HOM05D000237 ORTHO05D006530 7.1e-120 436.8 761 46.6
Aqoxy6G00305 Aquilegia oxysepala HOM05D000237 ORTHO05D006530 1.8e-118 432.2 892 42.5
MBI03_g13492_MAGBIO Magnolia biondii HOM05D000237 ORTHO05D006530 6.7e-118 430.3 871 42.6
DCAR_003591 Daucus carota HOM05D000237 ORTHO05D006530 1.1e-117 429.5 1029 39.3
Thhalv10006523m.g Eutrema salsugineum HOM05D000237 ORTHO05D006530 1.1e-117 429.5 763 47.3
Duzib041G0809 Durio zibethinus HOM05D000237 ORTHO05D006530 1.5e-117 429.1 981 41.1
arahy.Tifrunner.gnm1.ann1.JKU5X8 Arachis hypogaea HOM05D000237 ORTHO05D006530 3.3e-117 427.9 766 46.1
arahy.Tifrunner.gnm1.ann1.8V8SFL Arachis hypogaea HOM05D000237 ORTHO05D006530 2.6e-114 418.3 768 45.6
HanXRQChr09g0256631 Helianthus annuus HOM05D000237 ORTHO05D006530 1.4e-112 412.5 862 42.7
THA.LOC104812079 Tarenaya hassleriana HOM05D000237 ORTHO05D006530 1.9e-112 412.1 870 42.8
C05p20570 Brassica napus HOM05D000237 ORTHO05D006530 2.7e-111 408.3 733 43.1
AUR62013435 Chenopodium quinoa HOM05D000237 ORTHO05D006530 2.7e-111 408.3 885 36.2
BcaC05g26074 Brassica carinata HOM05D000237 ORTHO05D006530 1.3e-110 406.0 677 45.2
BolC5t30755H Brassica oleracea HOM05D000237 ORTHO05D006530 1.3e-110 406.0 733 43.0
Carub.0001s2101 Capsella rubella HOM05D000237 ORTHO05D006530 1.6e-108 399.1 732 46.2
A06p17660 Brassica napus HOM05D000237 ORTHO05D006530 2.1e-108 398.7 535 51.0
AL1G34720 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 3.7e-108 397.9 730 45.3
C08p20910 Brassica napus HOM05D000237 ORTHO05D006530 6.2e-108 397.1 834 41.2
BolC8t49729H Brassica oleracea HOM05D000237 ORTHO05D006530 4.0e-107 394.4 834 41.0
Cpa.g.sc1156.4 Carica papaya HOM05D000237 ORTHO05D006530 1.0e-105 389.8 480 56.7
Sp1g19110 Schrenkiella parvula HOM05D000237 ORTHO05D006530 1.7e-105 389.0 742 45.0
ECA232G3457 Erigeron canadensis HOM05D000237 ORTHO05D006530 6.5e-105 387.1 852 41.4
A08p28930 Brassica napus HOM05D000987 ORTHO05D006530 7.1e-104 383.6 755 42.0
BraA08t34823Z Brassica rapa HOM05D000237 ORTHO05D006530 7.1e-104 383.6 755 42.0
AT1G21580 Arabidopsis thaliana HOM05D000237 ORTHO05D006530 1.2e-103 382.9 574 45.6
CARHR021940 Cardamine hirsuta HOM05D000237 ORTHO05D006530 4.6e-103 380.9 620 44.5
EL10Ac1g01364 Beta vulgaris HOM05D000237 ORTHO05D006530 1.3e-102 379.4 928 38.0
PSO170G5097 Papaver somniferum HOM05D000237 ORTHO05D006530 1.1e-101 376.3 813 42.6
PSO528G0213 Papaver somniferum HOM05D000237 ORTHO05D006530 3.7e-100 371.3 819 42.0
Hund17350 Selenicereus undatus HOM05D000237 ORTHO05D006530 1.5e-98 365.9 904 38.6
Ah.05g169070 Amaranthus hybridus HOM05D000237 ORTHO05D006530 1.2e-95 356.3 991 36.6
CDE08G0007 Ceratophyllum demersum HOM05D000237 ORTHO05D006530 1.7e-92 345.9 747 44.2
CsaV3_7G022160 Cucumis sativus L. HOM05D000237 ORTHO05D006530 2.2e-92 345.5 877 37.4
Aa31LG7G5550 Aethionema arabicum HOM05D000237 ORTHO05D006530 7.7e-90 337.0 842 39.1
Sc20g0002700 Simmondsia chinensis HOM05D000237 ORTHO05D006530 6.5e-89 334.0 491 52.5
Lsat_1_v5_gn_4_135201 Lactuca sativa HOM05D000237 ORTHO05D006530 7.2e-88 330.5 810 39.9
MELO3C012713.2 Cucumis melo HOM05D000237 ORTHO05D006530 2.0e-85 322.4 929 34.8
arahy.Tifrunner.gnm1.ann1.A7GBNY Arachis hypogaea HOM05D000237 ORTHO05D006530 1.7e-84 319.3 775 38.5
vmacro21123 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 2.4e-83 315.5 497 42.9
arahy.Tifrunner.gnm1.ann1.6HV4D5 Arachis hypogaea HOM05D000237 ORTHO05D006530 1.5e-82 312.8 752 39.0
arahy.Tifrunner.gnm1.ann1.S57KMF Arachis hypogaea HOM05D000237 ORTHO05D006530 1.4e-80 306.2 709 39.5
ATR1001G008 Amborella trichopoda HOM05D000237 ORTHO05D006530 1.6e-79 302.8 616 38.6
Zm00001eb387360 Zea mays HOM05D000237 ORTHO05D006530 4.5e-74 284.6 829 35.7
Sed0005866 Sechium edule HOM05D000237 ORTHO05D006530 4.0e-70 271.6 719 33.1
Os06g0638000 Oryza sativa ssp. japonica HOM05D000237 ORTHO05D006530 5.2e-70 271.2 789 36.6
Manes.18G083000 Manihot esculenta HOM05D000237 ORTHO05D006530 2.6e-69 268.9 546 41.0
unitig_46.g18088 Utricularia gibba HOM05D000237 ORTHO05D006530 2.2e-68 265.8 788 37.1
Mapoly0097s0070 Marchantia polymorpha HOM05D000237 ORTHO05D006530 4.1e-67 261.5 610 41.3
ClCG09G021810 Citrullus lanatus HOM05D000237 ORTHO05D006530 2.7e-66 258.8 851 35.3
AL2G37460 Arabidopsis lyrata HOM05D000237 ORTHO05D006530 3.8e-65 255.0 619 40.7
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 3.6e-63 248.4 645 34.1
HPP92_004772 Vanilla planifolia HOM05D000237 ORTHO05D006530 1.4e-62 246.5 845 33.1
SMO367G0550 Selaginella moellendorffii HOM05D000237 ORTHO05D006530 1.7e-60 239.6 333 53.8
PGSC0003DMG401025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 7.0e-59 234.2 1446 26.8
SEGI_16153 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 2.8e-52 212.2 241 49.4
Pp3c2_14590 Physcomitrium patens HOM05D000237 ORTHO05D006530 1.8e-46 193.0 697 34.7
Oeu045950.1 Olea europaea HOM05D000237 ORTHO05D006530 4.4e-45 188.3 309 44.7
CBR_g18950 Chara braunii HOM05D000237 ORTHO05D006530 4.9e-44 184.9 490 38.2
AUR62007706 Chenopodium quinoa HOM05D000237 ORTHO05D006530 3.9e-41 175.3 492 35.6
SHI09235 Sapria himalayana HOM05D000237 ORTHO05D006530 5.0e-41 174.9 284 51.4
CARHR070760 Cardamine hirsuta HOM05D000237 ORTHO05D006530 3.0e-33 149.1 200 47.5
Oeu030983.1 Olea europaea HOM05D000237 ORTHO05D006530 7.5e-29 134.4 95 76.8
TPR.G40837 Trifolium pratense HOM05D000237 ORTHO05D006530 1.3e-25 123.6 123 58.5
TPR.G4655 Trifolium pratense HOM05D000237 ORTHO05D013217 7.6e-21 107.8 67 80.6
vmacro21124 Vaccinium macrocarpon HOM05D000237 ORTHO05D006530 1.4e-19 103.6 277 34.7
PGSC0003DMG402025318 Solanum tuberosum HOM05D000237 ORTHO05D006530 2.4e-19 102.8 139 44.6
ATR0172G001 Amborella trichopoda HOM05D000237 ORTHO05D006530 3.6e-15 89.0 125 40.0
MD08G1160000 Malus domestica HOM05D000237 ORTHO05D006530 1.4e-14 87.0 224 29.9
LjContig00357g0005900 Lotus japonicus HOM05D000237 ORTHO05D005612 2.6e-13 82.8 831 21.9
Sc20g0002720 Simmondsia chinensis HOM05D000237 ORTHO05D006530 2.6e-13 82.8 100 46.0
Lj4A681T41 Lonicera japonica HOM05D000237 ORTHO05D006530 1.7e-12 80.1 142 38.0
Oeu047172.1 Olea europaea HOM05D000237 ORTHO05D006530 3.2e-11 75.9 125 39.2
Cpa.g.sc1156.5 Carica papaya HOM05D000237 ORTHO05D006530 2.1e-10 73.2 334 28.1
Lalb_Chr11g0066211 Lupinus albus HOM05D000237 ORTHO05D006530 6.6e-09 68.2 138 31.9
SEGI_02602 Sequoiadendron giganteum HOM05D000237 ORTHO05D006530 3.6e-07 62.4 118 31.4
Oeu047175.1 Olea europaea HOM05D000237 ORTHO05D006530 1.8e-06 60.1 128 32.0


User provided reference genes

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