Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 3.1e-204 714.9 367 100.0
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 1.8e-151 539.7 368 78.0
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 3.7e-128 462.2 336 71.4
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 5.3e-127 458.4 371 66.6
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 5.8e-126 454.9 367 67.0
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 7.6e-126 454.5 371 66.3
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 9.9e-126 454.1 367 65.9
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 1.7e-125 453.4 372 66.1
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 3.8e-125 452.2 344 70.9
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 4.9e-125 451.8 363 68.0
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 4.2e-124 448.7 362 66.9
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 4.2e-124 448.7 363 67.8
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 4.2e-124 448.7 363 66.7
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 1.2e-123 447.2 327 71.3
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 2.7e-123 446.0 377 64.5
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 3.5e-123 445.7 363 67.5
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 3.5e-123 445.7 311 73.6
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 4.6e-123 445.3 370 65.7
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 6.0e-123 444.9 367 67.8
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 1.0e-122 444.1 326 71.5
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 3.0e-122 442.6 369 65.0
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 5.1e-122 441.8 353 69.4
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 6.7e-122 441.4 361 66.5
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 4.3e-121 438.7 356 66.6
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 4.3e-121 438.7 360 65.3
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 5.6e-121 438.3 310 72.6
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 9.6e-121 437.6 353 68.0
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 1.3e-120 437.2 337 67.4
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 2.8e-120 436.0 311 74.3
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 4.8e-120 435.3 365 66.3
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 1.4e-119 433.7 366 65.0
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 2.4e-119 433.0 283 74.9
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 4.0e-119 432.2 313 72.2
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 6.9e-119 431.4 313 71.9
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 9.0e-119 431.0 358 66.5
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 9.0e-119 431.0 371 65.0
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 2.0e-118 429.9 358 65.9
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 2.6e-118 429.5 350 66.0
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 2.6e-118 429.5 309 69.9
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 2.6e-118 429.5 315 70.2
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 4.5e-118 428.7 301 72.4
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 1.0e-117 427.6 298 72.1
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.7e-117 426.8 314 72.3
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 2.2e-117 426.4 365 64.9
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 6.5e-117 424.9 288 73.6
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 1.1e-116 424.1 291 75.6
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 1.4e-116 423.7 367 65.1
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 1.9e-116 423.3 293 73.7
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 2.5e-116 422.9 285 73.3
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 5.5e-116 421.8 295 72.2
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 1.2e-115 420.6 319 67.4
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 2.7e-115 419.5 294 72.4
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.7e-115 419.5 333 67.0
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 6.0e-115 418.3 329 68.1
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 7.9e-115 417.9 324 68.2
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 1.3e-114 417.2 315 68.6
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 2.3e-114 416.4 288 72.2
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 2.3e-114 416.4 351 62.7
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 2.3e-114 416.4 291 72.9
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 6.7e-114 414.8 313 68.1
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 6.7e-114 414.8 288 71.5
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 8.7e-114 414.5 313 68.1
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 8.7e-114 414.5 313 68.1
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 8.7e-114 414.5 343 64.1
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.5e-113 413.7 386 60.6
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 3.3e-113 412.5 338 65.4
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 3.3e-113 412.5 317 67.2
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 7.4e-113 411.4 361 61.8
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.8e-112 409.5 402 58.7
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 6.3e-112 408.3 324 65.4
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 2.4e-111 406.4 379 60.2
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 3.1e-111 406.0 288 75.0
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 4.1e-111 405.6 277 77.6
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 1.2e-110 404.1 294 69.7
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 1.4e-108 397.1 319 63.9
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 1.9e-108 396.7 352 59.9
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 1.2e-107 394.0 326 64.1
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 6.1e-107 391.7 287 74.2
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 1.3e-106 390.6 304 68.8
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.3e-106 390.6 342 62.9
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 3.0e-106 389.4 325 64.3
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.1e-105 387.5 311 67.8
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 1.3e-104 384.0 303 64.4
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 4.5e-102 375.6 258 75.2
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 3.3e-97 359.4 263 68.1
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 3.3e-97 359.4 517 43.9
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 6.3e-96 355.1 232 77.2
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 3.1e-95 352.8 314 62.7
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 6.5e-93 345.1 538 41.6
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 7.2e-92 341.7 528 42.2
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 3.6e-91 339.3 290 58.3
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.0e-90 337.8 284 67.3
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 2.6e-89 333.2 421 51.3
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 5.7e-89 332.0 355 55.5
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 1.8e-87 327.0 226 71.7
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 7.7e-86 321.6 294 55.8
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 5.0e-85 318.9 295 55.3
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 5.5e-84 315.5 287 57.8
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 2.3e-82 310.1 286 54.5
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 5.2e-82 308.9 232 65.9
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 3.1e-79 299.7 184 79.3
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 8.0e-75 285.0 409 46.9
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 4.0e-58 229.6 186 60.2
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.1e-55 221.5 193 64.8
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 2.4e-55 220.3 142 73.9
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 9.2e-55 218.4 313 42.2
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 4.6e-54 216.1 225 56.0
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 1.2e-49 201.4 170 59.4
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 1.5e-49 201.1 193 52.3
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.6e-49 200.3 312 40.4
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 1.4e-47 194.5 235 49.8
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 9.2e-39 165.2 198 48.5
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 7.1e-31 139.0 216 40.3
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 1.8e-26 124.4 109 59.6
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 4.0e-26 123.2 107 59.8
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 9.0e-26 122.1 209 37.3
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 1.5e-25 121.3 119 56.3
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 2.9e-24 117.1 100 65.0
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.4e-18 98.2 113 57.5
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 6.9e-18 95.9 90 57.8
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 6.9e-18 95.9 64 75.0
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.1e-15 85.9 155 32.9
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 1.3e-13 81.6 87 49.4
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 7.4e-12 75.9 66 56.1
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 8.1e-11 72.4 105 45.7
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 6.4e-08 62.8 57 63.2
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 8.4e-08 62.4 57 63.2
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 4.2e-07 60.1 57 61.4


User provided reference genes

Program Settings