Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1364.0 683 100.0
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1101.3 686 85.4
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 0.0e+00 1095.1 695 83.9
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 6.6e-224 781.2 696 62.1
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.2e-202 709.1 712 56.5
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.7e-193 679.5 676 54.4
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 3.1e-189 666.0 685 54.3
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 1.0e-187 661.0 672 52.2
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 3.2e-186 656.0 713 51.8
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.3e-184 650.6 674 53.7
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 1.1e-183 647.5 666 53.5
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.5e-183 647.1 674 52.7
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 4.3e-183 645.6 678 52.9
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 5.7e-183 645.2 685 53.4
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.1e-182 643.3 629 56.8
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 2.8e-182 642.9 666 55.0
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.4e-180 636.0 667 53.2
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 6.5e-179 631.7 657 54.2
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.5e-179 631.3 671 51.3
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.2e-178 629.4 686 51.5
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 5.5e-178 628.6 663 52.5
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.6e-177 625.5 650 53.1
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 7.9e-177 624.8 715 49.9
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.3e-176 624.0 679 51.7
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 3.9e-176 622.5 661 51.9
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 5.1e-176 622.1 658 50.8
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 8.7e-176 621.3 669 51.4
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.5e-175 620.5 668 51.9
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.9e-175 620.2 666 51.4
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.9e-175 620.2 650 52.3
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 7.4e-175 618.2 761 46.9
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 3.7e-174 615.9 666 50.8
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.4e-173 614.0 672 52.2
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 4.1e-173 612.5 675 51.3
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 4.1e-173 612.5 664 50.6
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 9.1e-173 611.3 651 51.2
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 1.5e-172 610.5 652 51.4
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 4.5e-172 609.0 621 53.6
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 4.5e-172 609.0 662 50.8
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 4.5e-172 609.0 660 50.3
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 7.7e-172 608.2 657 51.4
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 1.0e-171 607.8 660 50.8
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.2e-171 606.7 662 50.8
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 3.8e-171 605.9 662 50.6
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 6.5e-171 605.1 654 49.8
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.4e-170 604.0 662 50.6
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 2.5e-170 603.2 667 50.5
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 5.5e-170 602.1 663 50.4
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 7.2e-170 601.7 640 53.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.2e-169 600.9 662 50.3
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 1.6e-169 600.5 662 51.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 3.6e-169 599.4 672 50.3
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 6.1e-169 598.6 650 51.2
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.4e-168 597.4 687 49.3
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 2.0e-167 593.6 638 51.7
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 5.7e-167 592.0 689 48.9
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 9.7e-167 591.3 658 50.3
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 2.8e-166 589.7 625 52.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.8e-166 589.7 662 51.2
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.8e-166 589.7 662 51.2
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.1e-165 587.8 658 50.8
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 1.1e-165 587.8 682 48.8
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.4e-165 587.4 662 50.8
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 1.8e-165 587.0 662 51.2
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.8e-165 587.0 690 49.6
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 3.1e-165 586.3 664 50.9
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 4.5e-164 582.4 664 48.9
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 2.2e-163 580.1 657 48.4
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.5e-162 575.5 660 49.4
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 2.1e-161 573.5 627 51.7
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 6.1e-161 572.0 684 49.1
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 6.1e-161 572.0 654 50.3
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.0e-160 571.2 661 48.1
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 7.4e-159 565.1 704 46.9
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 2.4e-157 560.1 692 45.5
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.7e-148 528.5 624 49.5
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 1.9e-146 523.9 493 58.0
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.2e-145 521.2 670 45.1
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 2.7e-145 520.0 510 54.1
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.0e-144 518.1 671 45.6
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.7e-142 510.8 532 51.9
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 2.1e-137 493.8 425 59.1
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 1.4e-136 491.1 729 43.3
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 2.0e-135 487.3 451 56.3
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 8.3e-134 481.9 653 46.1
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 8.6e-131 471.9 645 45.0
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 2.6e-127 460.3 602 45.8
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 4.1e-125 453.0 527 48.6
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.4e-120 438.0 597 44.9
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.6e-119 433.7 375 59.2
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 7.0e-117 425.6 512 48.2
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 1.1e-114 418.3 355 61.1
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 2.7e-108 397.1 318 62.9
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.2e-97 361.7 312 59.0
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.0e-95 354.4 645 35.5
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 3.4e-95 353.6 304 58.9
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 4.6e-92 343.2 302 59.3
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 6.6e-91 339.3 389 50.9
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 2.5e-90 337.4 699 34.6
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 4.0e-88 330.1 334 53.6
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 5.3e-80 303.1 644 33.1
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.7e-73 280.4 376 46.0
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 6.9e-72 276.2 378 44.4
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.3e-66 257.3 599 32.1
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 3.3e-66 257.3 549 32.2
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 3.2e-61 240.7 330 42.7
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 8.2e-57 226.1 311 46.6
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 3.6e-52 210.7 406 38.4
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.3e-51 208.0 215 54.0
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 2.4e-40 171.4 152 54.6
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 4.5e-39 167.2 140 62.1
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.0e-38 166.0 340 34.4
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-37 160.2 252 38.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.7e-35 153.3 264 40.2
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.8e-32 145.2 126 56.3
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 1.6e-31 142.1 149 51.0
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 7.7e-31 139.8 128 55.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.9e-30 137.9 197 42.6
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.0e-27 127.9 144 42.4
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 1.4e-24 119.0 142 48.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.8e-16 92.0 81 61.7
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 7.8e-15 86.7 52 73.1
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.5e-13 81.6 220 27.3
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 3.3e-13 81.3 84 52.4
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 9.5e-13 79.7 128 39.1
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 1.3e-09 69.3 326 24.5
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.9e-09 68.2 67 44.8
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 1.4e-08 65.9 153 29.4
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 2.7e-07 61.6 285 24.2


User provided reference genes

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