Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 7.6e-130 467.2 246 100.0
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 9.4e-104 380.6 246 81.7
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 4.1e-99 365.2 245 78.4
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 1.4e-96 356.7 245 77.6
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 3.2e-96 355.5 245 77.1
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 8.5e-89 330.9 228 77.2
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 1.2e-87 327.0 248 72.2
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 2.7e-87 325.9 251 72.1
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 1.0e-81 307.4 246 67.9
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 1.7e-81 306.6 247 69.2
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 3.8e-81 305.4 255 67.1
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 1.1e-80 303.9 246 65.4
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.2e-80 302.4 238 66.4
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 3.2e-80 302.4 238 66.4
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 1.6e-79 300.1 243 65.0
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 2.1e-79 299.7 250 67.2
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 2.1e-79 299.7 242 65.3
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 4.7e-79 298.5 242 67.8
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 2.3e-78 296.2 230 67.0
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 8.8e-78 294.3 255 63.9
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 8.8e-78 294.3 254 64.6
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 2.0e-77 293.1 243 68.7
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 7.5e-77 291.2 252 64.3
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 1.7e-76 290.0 237 68.4
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 2.2e-76 289.7 237 65.0
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 4.8e-76 288.5 246 65.9
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.6e-74 283.5 248 63.3
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 2.0e-74 283.1 248 63.3
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 2.0e-74 283.1 246 63.8
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 2.7e-74 282.7 250 62.4
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.7e-74 282.7 248 63.3
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 5.9e-74 281.6 248 64.9
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 5.9e-74 281.6 236 65.3
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 1.0e-73 280.8 246 63.8
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 1.0e-73 280.8 236 65.7
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 1.3e-73 280.4 237 65.0
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.3e-73 280.4 243 62.6
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.7e-73 280.0 237 64.6
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 2.9e-73 279.3 247 63.2
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 3.8e-73 278.9 246 62.6
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 3.8e-73 278.9 244 63.5
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 6.5e-73 278.1 247 62.3
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 6.5e-73 278.1 244 62.7
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 8.5e-73 277.7 242 62.8
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 1.1e-72 277.3 243 63.8
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 7.2e-72 274.6 244 64.3
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 7.2e-72 274.6 248 63.3
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 2.7e-71 272.7 250 60.8
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 3.6e-71 272.3 243 62.1
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 4.7e-71 271.9 243 62.1
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 8.0e-71 271.2 244 61.9
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.0e-70 270.8 249 60.6
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 1.4e-70 270.4 242 62.4
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.8e-70 270.0 245 64.1
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 5.2e-70 268.5 243 61.7
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.5e-69 266.9 240 62.1
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.0e-69 266.5 237 61.2
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 2.6e-69 266.2 249 60.2
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 2.6e-69 266.2 242 63.6
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.4e-69 265.4 249 60.2
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 4.4e-69 265.4 249 60.2
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 7.5e-69 264.6 249 59.4
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 7.5e-69 264.6 252 61.9
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 1.7e-68 263.5 253 61.3
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 2.2e-68 263.1 224 61.6
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 4.9e-68 261.9 243 60.9
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 1.8e-67 260.0 225 62.7
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 1.8e-67 260.0 227 62.1
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 2.4e-67 259.6 236 61.4
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 3.1e-67 259.2 243 60.9
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 5.4e-67 258.5 244 59.8
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 1.2e-66 257.3 233 62.7
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 3.5e-66 255.8 221 62.0
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 5.9e-66 255.0 245 60.8
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 1.7e-65 253.4 250 59.6
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 2.9e-65 252.7 180 76.1
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 2.9e-65 252.7 246 59.3
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 3.8e-65 252.3 248 59.3
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 2.5e-64 249.6 243 58.0
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 2.5e-64 249.6 243 58.0
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.2e-63 247.3 244 57.4
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 2.1e-63 246.5 241 57.7
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 2.8e-63 246.1 231 61.0
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.2e-61 240.7 224 61.6
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.8e-59 233.4 254 53.5
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 2.4e-59 233.0 252 52.0
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 2.4e-59 233.0 232 56.9
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 1.6e-58 230.3 251 52.6
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 2.0e-58 229.9 247 56.3
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 3.0e-57 226.1 236 53.8
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 5.0e-57 225.3 245 52.7
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 8.6e-57 224.6 245 52.2
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 8.6e-57 224.6 254 51.6
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 1.9e-56 223.4 243 52.3
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.9e-56 223.4 177 65.5
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 2.5e-56 223.0 254 50.0
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 7.3e-56 221.5 254 50.4
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 9.5e-56 221.1 253 51.4
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 2.8e-55 219.5 236 52.1
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 8.0e-55 218.0 246 50.8
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 5.2e-54 215.3 254 48.8
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 2.0e-53 213.4 248 49.6
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 2.0e-53 213.4 248 49.6
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 2.6e-53 213.0 216 56.9
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 6.4e-52 208.4 236 49.6
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 3.9e-49 199.1 255 47.1
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 1.4e-46 190.7 246 46.3
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 3.1e-46 189.5 245 46.1
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 4.0e-46 189.1 201 53.2
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 6.8e-46 188.3 121 77.7
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 1.2e-45 187.6 245 45.7
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 1.2e-45 187.6 245 45.7
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 2.0e-45 186.8 246 45.9
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 1.7e-44 183.7 247 44.1
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 8.4e-36 154.8 241 44.8
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 1.1e-35 154.5 144 62.5
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 2.5e-32 143.3 121 57.9
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 7.6e-29 131.7 121 57.9
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.3e-25 120.9 79 81.0
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 5.1e-25 119.0 224 36.6
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 3.1e-22 109.8 127 49.6
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 3.1e-22 109.8 75 74.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 5.3e-22 109.0 174 39.7
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 3.2e-19 99.8 87 57.5
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 3.3e-16 89.7 94 54.3
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 2.9e-12 76.6 140 36.4
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 5.5e-11 72.4 117 42.7
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 1.2e-10 71.2 61 55.7
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 2.1e-10 70.5 68 58.8
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 1.3e-09 67.8 87 48.3
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 1.5e-08 64.3 56 60.7


User provided reference genes

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