Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01799 Erythranthe guttata HOM05D004048 ORTHO05D004859 1.4e-201 706.1 357 100.0
SGA_v2.0_scaffold4G02279 Striga asiatica HOM05D004048 ORTHO05D004859 1.5e-174 616.3 358 86.6
Dinv32522 Davidia involucrata HOM05D004048 ORTHO05D004859 7.3e-166 587.4 327 88.7
CSS0027402 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 3.6e-165 585.1 337 86.6
CSS0029554 Camellia sinensis var. sinensis HOM05D004048 ORTHO05D004859 4.7e-165 584.7 337 86.6
CAN.G439.29 Capsicum annuum HOM05D004048 ORTHO05D004859 1.2e-163 580.1 339 85.5
EL10Ac1g00354 Beta vulgaris HOM05D004048 ORTHO05D004859 4.4e-163 578.2 327 86.2
Potri.014G090500 Populus trichocarpa HOM05D004048 ORTHO05D004859 5.8e-163 577.8 353 82.4
Sabra14G0065600 Salix brachista HOM05D004048 ORTHO05D004859 5.8e-163 577.8 353 82.7
Hund27241 Selenicereus undatus HOM05D004048 ORTHO05D004859 7.6e-163 577.4 327 87.5
vmacro13227 Vaccinium macrocarpon HOM05D004048 ORTHO05D004859 1.3e-162 576.6 330 87.0
Ciclev10020577m.g Citrus clementina HOM05D004048 ORTHO05D004859 1.7e-162 576.2 332 85.2
Manes.05G029300 Manihot esculenta HOM05D004048 ORTHO05D004859 2.2e-162 575.9 337 84.6
MD07G1131200 Malus domestica HOM05D004048 ORTHO05D004859 3.8e-162 575.1 327 87.5
Sp5g01880 Schrenkiella parvula HOM05D004048 ORTHO05D004859 4.9e-162 574.7 345 83.8
Cc02_g21240 Coffea canephora HOM05D004048 ORTHO05D004859 8.4e-162 573.9 354 81.9
QL04p055532 Quercus lobata HOM05D004048 ORTHO05D004859 8.4e-162 573.9 338 85.2
Nitab4.5_0000615g0020 Nicotiana tabacum HOM05D004048 ORTHO05D004859 1.4e-161 573.2 339 84.7
Actinidia10075 Actinidia chinensis HOM05D004048 ORTHO05D004859 2.4e-161 572.4 335 84.5
AL5G43890 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 2.4e-161 572.4 345 82.3
THA.LOC104817317 Tarenaya hassleriana HOM05D004048 ORTHO05D004859 2.4e-161 572.4 344 83.1
Haze_15565 Corylus avellana HOM05D004048 ORTHO05D004859 5.4e-161 571.2 364 78.6
Peaxi162Scf00217g00711 Petunia axillaris HOM05D004048 ORTHO05D004859 7.1e-161 570.9 351 82.6
Prupe.2G177600 Prunus persica HOM05D004048 ORTHO05D004859 7.1e-161 570.9 332 85.5
AT2G46110 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 1.2e-160 570.1 346 82.9
Gohir.D08G043100 Gossypium hirsutum HOM05D004048 ORTHO05D004859 1.2e-160 570.1 340 83.8
AUR62004413 Chenopodium quinoa HOM05D004048 ORTHO05D004859 1.6e-160 569.7 356 81.5
Gorai.004G041700 Gossypium raimondii HOM05D004048 ORTHO05D004859 2.7e-160 568.9 340 83.8
TWI23G0617 Tripterygium wilfordii HOM05D004048 ORTHO05D004859 2.7e-160 568.9 325 86.8
Solyc09g007130.3 Solanum lycopersicum HOM05D004048 ORTHO05D004859 3.5e-160 568.5 351 82.6
TAR375G1056 Trochodendron aralioides HOM05D004048 ORTHO05D004859 3.5e-160 568.5 354 81.4
AT3G61530 Arabidopsis thaliana HOM05D004048 ORTHO05D004859 4.6e-160 568.2 343 82.2
BcaB02g07374 Brassica carinata HOM05D004048 ORTHO05D004859 7.8e-160 567.4 347 81.6
Aa31LG10G15450 Aethionema arabicum HOM05D004048 ORTHO05D004859 1.0e-159 567.0 346 82.7
Sp4g28180 Schrenkiella parvula HOM05D004048 ORTHO05D004859 1.0e-159 567.0 330 84.5
Thhalv10001521m.g Eutrema salsugineum HOM05D004048 ORTHO05D004859 1.3e-159 566.6 345 82.0
Hma1.2p1_0335F.1_g128890 Hydrangea macrophylla HOM05D004048 ORTHO05D004859 1.7e-159 566.2 356 79.2
PGR004G0897 Punica granatum HOM05D004048 ORTHO05D004859 1.7e-159 566.2 337 82.5
Lj9C589T5 Lonicera japonica HOM05D004048 ORTHO05D004859 2.3e-159 565.8 347 81.8
PGSC0003DMG400002011 Solanum tuberosum HOM05D004048 ORTHO05D004859 2.3e-159 565.8 327 85.3
Gohir.A08G032200 Gossypium hirsutum HOM05D004048 ORTHO05D004859 3.9e-159 565.1 340 82.6
A07p25550 Brassica napus HOM05D004048 ORTHO05D004859 5.1e-159 564.7 349 81.1
MBI03_g34597_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 5.1e-159 564.7 327 84.7
A09p53600 Brassica napus HOM05D004048 ORTHO05D004859 8.7e-159 563.9 351 80.6
C06p27540 Brassica napus HOM05D004048 ORTHO05D004859 8.7e-159 563.9 349 80.8
BraA07t30196Z Brassica rapa HOM05D004048 ORTHO05D004859 8.7e-159 563.9 349 81.1
COL.COLO4_12778 Corchorus olitorius HOM05D004048 ORTHO05D004859 8.7e-159 563.9 332 84.0
Carub.0004s2881 Capsella rubella HOM05D004048 ORTHO05D004859 1.1e-158 563.5 353 81.0
BolC6t37921H Brassica oleracea HOM05D004048 ORTHO05D004859 1.5e-158 563.1 349 80.8
BcaC08g45130 Brassica carinata HOM05D004048 ORTHO05D004859 1.9e-158 562.8 349 80.8
BraA09t40782Z Brassica rapa HOM05D004048 ORTHO05D004859 1.9e-158 562.8 351 80.9
CiPaw.02G034800 Carya illinoinensis HOM05D004048 ORTHO05D004859 1.9e-158 562.8 338 83.7
Sc01g0003210 Simmondsia chinensis HOM05D004048 ORTHO05D004859 1.9e-158 562.8 338 82.5
DCAR_025214 Daucus carota HOM05D004048 ORTHO05D004859 3.3e-158 562.0 347 82.1
Thecc.01G352400 Theobroma cacao HOM05D004048 ORTHO05D004859 4.3e-158 561.6 328 84.5
BcaC07g40651 Brassica carinata HOM05D004048 ORTHO05D004859 7.3e-158 560.8 351 80.1
BolC8t51222H Brassica oleracea HOM05D004048 ORTHO05D004859 7.3e-158 560.8 351 80.1
C08p36390 Brassica napus HOM05D004048 ORTHO05D004859 1.6e-157 559.7 351 80.1
FvH4_7g15370 Fragaria vesca HOM05D004048 ORTHO05D004859 4.8e-157 558.1 337 82.8
FAN06G1753 Fragaria x ananassa HOM05D004048 ORTHO05D004859 6.2e-157 557.8 337 82.8
Aqoxy5G04084 Aquilegia oxysepala HOM05D004048 ORTHO05D004859 8.1e-157 557.4 343 82.2
PSO170G0644 Papaver somniferum HOM05D004048 ORTHO05D004859 1.4e-156 556.6 339 81.7
FAN10G1698 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.0e-156 555.1 337 82.5
FAN10G3606 Fragaria x ananassa HOM05D004048 ORTHO05D004859 4.0e-156 555.1 337 82.5
FAN03G0096 Fragaria x ananassa HOM05D004048 ORTHO05D004859 9.0e-156 553.9 337 82.2
Nn1g01686 Nelumbo nucifera HOM05D004048 ORTHO05D004859 9.0e-156 553.9 332 82.5
Rhsim07G0205800 Rhododendron simsii HOM05D004048 ORTHO05D004859 1.2e-155 553.5 365 77.8
Duzib268G0835 Durio zibethinus HOM05D004048 ORTHO05D004859 1.5e-155 553.1 326 83.7
PSO063G1481 Papaver somniferum HOM05D004048 ORTHO05D004859 1.5e-155 553.1 339 81.1
Oeu054354.2 Olea europaea HOM05D004048 ORTHO05D004859 2.6e-155 552.4 370 77.8
Atru.chr7.1494 Acer truncatum HOM05D004048 ORTHO05D004859 1.3e-154 550.1 334 80.8
arahy.Tifrunner.gnm1.ann1.9CR96V Arachis hypogaea HOM05D004048 ORTHO05D004859 1.7e-154 549.7 338 81.7
CsaV3_7G025860 Cucumis sativus L. HOM05D004048 ORTHO05D004859 1.7e-154 549.7 346 80.1
Eucgr.B01988 Eucalyptus grandis HOM05D004048 ORTHO05D004859 2.9e-154 548.9 327 82.3
RcHm_v2.0_Chr1g0357691 Rosa chinensis HOM05D004048 ORTHO05D004859 3.8e-154 548.5 335 81.5
arahy.Tifrunner.gnm1.ann1.8BBS1S Arachis hypogaea HOM05D004048 ORTHO05D004859 8.4e-154 547.4 338 81.4
VMungo0331G0386 Vigna mungo HOM05D004048 ORTHO05D004859 8.4e-154 547.4 332 82.2
FAN06G0189 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.1e-153 547.0 354 78.5
Carub.0005s2822 Capsella rubella HOM05D004048 ORTHO05D004859 2.4e-153 545.8 324 83.0
Gohir.D08G154300 Gossypium hirsutum HOM05D004048 ORTHO05D004859 7.1e-153 544.3 327 82.3
Gorai.004G160400 Gossypium raimondii HOM05D004048 ORTHO05D004859 7.1e-153 544.3 327 82.3
CANSAT56G4107 Cannabis sativa HOM05D004048 ORTHO05D004859 9.3e-153 543.9 337 81.6
HanXRQChr17g0562171 Helianthus annuus HOM05D004048 ORTHO05D004859 6.0e-152 541.2 354 78.8
Nitab4.5_0005222g0030 Nicotiana tabacum HOM05D004048 ORTHO05D004859 6.0e-152 541.2 342 81.9
Lj1g0027864 Lotus japonicus HOM05D004048 ORTHO05D004859 2.3e-151 539.3 339 79.6
AUR62022619 Chenopodium quinoa HOM05D004048 ORTHO05D004859 3.9e-151 538.5 301 88.0
Lalb_Chr17g0338041 Lupinus albus HOM05D004048 ORTHO05D004859 3.9e-151 538.5 350 78.3
Glyma.07G064600 Glycine max HOM05D004048 ORTHO05D004859 5.1e-151 538.1 348 78.7
Lj5g0009706 Lotus japonicus HOM05D004048 ORTHO05D004859 2.5e-150 535.8 339 79.9
Medtr8g028555 Medicago truncatula HOM05D004048 ORTHO05D004859 5.6e-150 534.6 352 78.4
TPR.G28287 Trifolium pratense HOM05D004048 ORTHO05D004859 9.6e-150 533.9 349 78.2
BcaC07g40671 Brassica carinata HOM05D004048 ORTHO05D004859 1.6e-149 533.1 358 76.5
Duzib138G1147 Durio zibethinus HOM05D004048 ORTHO05D004859 1.6e-149 533.1 356 75.3
arahy.Tifrunner.gnm1.ann1.8G3C0P Arachis hypogaea HOM05D004048 ORTHO05D004859 2.1e-149 532.7 354 76.3
Psat4g156920 Pisum sativum HOM05D004048 ORTHO05D004859 4.8e-149 531.6 332 80.7
RcHm_v2.0_Chr1g0357711 Rosa chinensis HOM05D004048 ORTHO05D004859 1.8e-148 529.6 332 78.9
HPP92_005267 Vanilla planifolia HOM05D004048 ORTHO05D004859 3.1e-148 528.9 326 78.8
Lsat_1_v5_gn_4_35260 Lactuca sativa HOM05D004048 ORTHO05D004859 5.3e-148 528.1 340 78.8
MELO3C014805.2 Cucumis melo HOM05D004048 ORTHO05D004859 5.8e-147 524.6 341 78.0
unitig_60.g25627 Utricularia gibba HOM05D004048 ORTHO05D004859 7.6e-147 524.2 330 80.9
Sopen09g002000 Solanum pennellii HOM05D004048 ORTHO05D004859 1.7e-146 523.1 297 87.2
Rhsim07G0010400 Rhododendron simsii HOM05D004048 ORTHO05D004859 2.9e-146 522.3 329 80.9
TPR.G37181 Trifolium pratense HOM05D004048 ORTHO05D004859 1.9e-145 519.6 349 75.9
Ca_03490_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 4.6e-144 515.0 362 74.0
MELO3C012767.2 Cucumis melo HOM05D004048 ORTHO05D004859 8.7e-143 510.8 410 67.3
SEGI_12250 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 2.6e-139 499.2 342 71.6
Rhsim07G0206900 Rhododendron simsii HOM05D004048 ORTHO05D004859 4.5e-139 498.4 382 69.4
Ah.05g180160 Amaranthus hybridus HOM05D004048 ORTHO05D004859 4.9e-138 495.0 329 76.3
ClCG09G009090 Citrullus lanatus HOM05D004048 ORTHO05D004859 4.9e-138 495.0 346 73.4
CARHR107270 Cardamine hirsuta HOM05D004048 ORTHO05D004859 7.1e-137 491.1 331 75.8
FvH4_7g15371 Fragaria vesca HOM05D004048 ORTHO05D004859 1.6e-136 490.0 358 70.1
Phvul.010G104900 Phaseolus vulgaris HOM05D004048 ORTHO05D004859 6.0e-136 488.0 286 85.0
Pp3c7_220 Physcomitrium patens HOM05D004048 ORTHO05D004859 2.5e-129 466.1 324 70.4
Mapoly0035s0043 Marchantia polymorpha HOM05D004048 ORTHO05D004859 2.3e-127 459.5 326 69.9
SMO144G0210 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 6.7e-127 458.0 329 69.0
Cpa.g.sc11.73 Carica papaya HOM05D004048 ORTHO05D004859 5.7e-126 454.9 327 72.5
Os01g0225500 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 6.3e-125 451.4 302 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1042 Anthoceros agrestis HOM05D004048 ORTHO05D004859 5.3e-124 448.4 326 68.4
AagrBONN_evm.TU.Sc2ySwM_117.2358 Anthoceros agrestis HOM05D004048 ORTHO05D004859 1.5e-123 446.8 326 68.1
GSVIVG01026967001 Vitis vinifera HOM05D004048 ORTHO05D004859 1.7e-122 443.4 261 83.1
FAN10G3616 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.2e-122 443.0 366 65.3
Glyma.09G254700 Glycine max HOM05D004048 ORTHO05D004859 1.4e-121 440.3 308 71.4
MCO13G154 Micromonas commoda HOM05D004048 ORTHO05D004859 2.5e-121 439.5 317 68.1
ECA234G0147 Erigeron canadensis HOM05D004048 ORTHO05D004859 3.6e-120 435.6 286 78.7
Cre12.g508550 Chlamydomonas reinhardtii HOM05D004048 ORTHO05D004859 4.6e-120 435.3 330 64.2
Gohir.A08G133000 Gossypium hirsutum HOM05D004048 ORTHO05D004859 3.1e-116 422.5 257 81.3
BcaC07g42671 Brassica carinata HOM05D004048 ORTHO05D004859 2.5e-113 412.9 326 67.2
CBR_g45417 Chara braunii HOM05D004048 ORTHO05D004859 9.4e-113 411.0 308 64.6
CDE11G0110 Ceratophyllum demersum HOM05D004048 ORTHO05D004859 1.5e-110 403.7 248 80.6
Nn6g32447 Nelumbo nucifera HOM05D004048 ORTHO05D004859 1.5e-110 403.7 351 63.2
Zm00001eb339000 Zea mays HOM05D004048 ORTHO05D004859 7.4e-110 401.4 240 84.6
SMO356G0035 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 2.2e-109 399.8 300 66.0
ATR0751G082 Amborella trichopoda HOM05D004048 ORTHO05D004859 2.4e-108 396.4 268 76.5
Medtr4g037305 Medicago truncatula HOM05D004048 ORTHO05D004859 2.6e-107 392.9 241 81.7
FAN06G1997 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.5e-105 387.1 369 57.5
SMO119G0299 Selaginella moellendorffii HOM05D004048 ORTHO05D004859 2.5e-105 386.3 274 68.6
FAN06G4041 Fragaria x ananassa HOM05D004048 ORTHO05D004859 2.7e-104 382.9 273 72.2
SEGI_21771 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 5.7e-102 375.2 244 76.2
FAN10G1509 Fragaria x ananassa HOM05D004048 ORTHO05D004859 8.2e-101 371.3 245 77.1
ATR0751G137 Amborella trichopoda HOM05D004048 ORTHO05D004859 4.1e-100 369.0 233 79.0
PRCOL_00005166 Prasinoderma coloniale HOM05D004048 ORTHO05D004859 5.3e-100 368.6 337 58.8
Eucgr.B01984 Eucalyptus grandis HOM05D004048 ORTHO05D004859 9.1e-100 367.9 355 58.3
AL4G45340 Arabidopsis lyrata HOM05D004048 ORTHO05D004859 7.2e-89 331.6 201 81.6
Eucgr.B01986 Eucalyptus grandis HOM05D004048 ORTHO05D004859 2.3e-74 283.5 288 56.9
Medtr4g037245 Medicago truncatula HOM05D004048 ORTHO05D004859 1.1e-73 281.2 203 73.9
Cfa001640 Carpinus fangiana HOM05D004048 ORTHO05D004859 2.3e-63 246.9 281 49.1
arahy.Tifrunner.gnm1.ann1.CIF5FW Arachis hypogaea HOM05D004048 ORTHO05D004859 1.0e-58 231.5 148 76.4
SEGI_25526 Sequoiadendron giganteum HOM05D004048 ORTHO05D004859 3.0e-58 229.9 161 68.3
PGSC0003DMG400018716 Solanum tuberosum HOM05D004048 ORTHO05D004859 1.2e-56 224.6 133 81.2
Cfa003872 Carpinus fangiana HOM05D004048 ORTHO05D004859 1.5e-54 217.6 362 42.5
Os01g0225400 Oryza sativa ssp. japonica HOM05D004048 ORTHO05D004859 2.9e-53 213.4 129 79.1
TPR.G28294 Trifolium pratense HOM05D004048 ORTHO05D004859 7.8e-51 205.3 253 50.6
SHI16536 Sapria himalayana HOM05D004048 ORTHO05D004859 1.5e-49 201.1 148 71.6
Haze_27487 Corylus avellana HOM05D004048 ORTHO05D004859 9.9e-46 188.3 236 41.1
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 2.3e-42 177.2 208 48.1
MBI17_g16531_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 9.0e-39 165.2 104 76.9
Lj6g0001313 Lotus japonicus HOM05D004048 ORTHO05D004859 1.2e-35 154.8 101 70.3
CAN.G439.28 Capsicum annuum HOM05D004048 ORTHO05D004859 3.5e-35 153.3 88 81.8
FAN01G2460 Fragaria x ananassa HOM05D004048 ORTHO05D004859 1.8e-34 151.0 96 71.9
MBI12_g43904_MAGBIO Magnolia biondii HOM05D004048 ORTHO05D004859 1.5e-33 147.9 96 80.2
Ca_03489_v3 Cicer arietinum L. HOM05D004048 ORTHO05D004859 5.6e-33 146.0 110 71.8
Medtr4g037315 Medicago truncatula HOM05D004048 ORTHO05D004859 7.4e-33 145.6 96 70.8
Actinidia20163 Actinidia chinensis HOM05D004048 ORTHO05D004859 1.7e-29 134.4 189 50.8
Medtr4g037275 Medicago truncatula HOM05D004048 ORTHO05D004859 8.4e-29 132.1 76 82.9
arahy.Tifrunner.gnm1.ann1.63JPLQ Arachis hypogaea HOM05D004048 ORTHO05D004859 3.5e-27 126.7 87 67.8
AL4G45350 Arabidopsis lyrata HOM05D004048 ORTHO05D038698 5.8e-22 109.4 73 76.7
SGA_v2.0_scaffold4G02383 Striga asiatica HOM05D004048 ORTHO05D051375 2.9e-21 107.1 71 83.1
ATR0751G274 Amborella trichopoda HOM05D004048 ORTHO05D004859 2.5e-20 104.0 73 61.6
arahy.Tifrunner.gnm1.ann1.DMYH1R Arachis hypogaea HOM05D004048 ORTHO05D004859 1.2e-19 101.7 78 61.5
FAN10G2371 Fragaria x ananassa HOM05D004048 ORTHO05D038698 2.7e-19 100.5 74 68.9
HanXRQChr15g0474641 Helianthus annuus HOM05D004048 ORTHO05D004859 1.3e-18 98.2 62 82.3
Potri.002G164601 Populus trichocarpa HOM05D004048 ORTHO05D004859 8.7e-18 95.5 72 62.5
DCAR_025216 Daucus carota HOM05D003118 ORTHO05D003618 2.2e-16 90.9 78 67.9
arahy.Tifrunner.gnm1.ann1.GKUV9U Arachis hypogaea HOM05D004048 ORTHO05D004859 6.3e-08 62.8 48 66.7


User provided reference genes

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