Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 0.0e+00 1327.8 700 100.0
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 9.4e-234 813.9 706 65.7
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 9.4e-226 787.3 702 63.5
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 5.4e-213 745.0 713 61.0
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 3.1e-192 676.0 704 53.4
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.2e-189 666.0 703 53.2
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 7.1e-189 664.8 704 53.7
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 3.6e-185 652.5 704 51.7
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.4e-183 646.0 704 52.1
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 1.3e-179 634.0 702 51.0
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 1.6e-177 627.1 702 55.1
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 3.9e-171 605.9 705 52.6
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 2.4e-168 596.7 707 51.8
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 9.3e-165 584.7 713 49.2
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 1.9e-157 560.5 702 48.9
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 1.2e-156 557.8 635 49.8
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.3e-155 554.3 704 48.7
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 7.9e-148 528.5 704 46.4
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 3.3e-146 523.1 707 46.0
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 1.1e-138 498.0 707 45.0
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.1e-136 490.0 706 45.3
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.4e-133 481.1 708 45.2
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.4e-133 481.1 705 45.1
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.2e-132 478.0 708 44.9
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 2.7e-132 476.9 708 44.8
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.7e-132 476.9 707 44.3
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 5.2e-131 472.6 709 45.3
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 6.3e-129 465.7 707 43.8
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 7.7e-127 458.8 710 41.3
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 3.1e-120 436.8 702 41.6
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 9.1e-120 435.3 712 42.8
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 2.5e-117 427.2 695 42.7
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 6.1e-116 422.5 685 42.2
Dinv14267 Davidia involucrata HOM05D006280 ORTHO05D007876 6.1e-116 422.5 469 54.8
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 3.0e-115 420.2 722 41.7
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 4.1e-112 409.8 709 41.2
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.7e-111 407.1 705 39.9
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 4.5e-111 406.4 701 38.9
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 1.3e-110 404.8 695 41.4
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.6e-108 396.7 477 53.0
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 2.0e-106 391.0 706 40.4
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 1.3e-105 388.3 719 38.2
MSTRG.5009 Avicennia marina HOM05D006280 ORTHO05D007876 2.8e-105 387.1 373 60.3
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.0e-103 380.9 711 39.2
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.0e-102 378.6 747 36.0
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 7.3e-101 372.5 689 38.6
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.3e-97 361.7 723 38.3
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 1.7e-97 361.3 709 38.4
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 2.2e-97 360.9 707 36.9
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 5.4e-96 356.3 518 44.4
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 1.2e-95 355.1 370 59.2
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 1.2e-95 355.1 709 37.4
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 1.2e-95 355.1 720 37.9
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 2.0e-95 354.4 771 36.6
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 6.6e-94 349.4 313 57.8
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 3.3e-93 347.1 693 36.9
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 2.1e-92 344.4 702 37.5
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 2.8e-92 344.0 711 36.8
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 3.6e-92 343.6 688 37.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 6.2e-92 342.8 679 37.4
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 5.2e-91 339.7 572 41.6
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 8.9e-91 339.0 649 39.4
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.3e-89 335.1 688 37.1
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.9e-89 334.0 646 36.8
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 3.7e-89 333.6 709 36.8
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 8.3e-89 332.4 716 36.9
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 1.3e-86 325.1 629 38.8
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 2.8e-84 317.4 696 35.3
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 6.8e-83 312.8 686 35.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.7e-81 308.1 691 36.0
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 2.9e-81 307.4 687 36.1
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-80 305.4 676 35.5
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 4.1e-80 303.5 726 33.9
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 1.6e-79 301.6 695 35.8
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.1e-76 291.2 532 38.9
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.8e-75 288.1 725 32.3
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 2.0e-74 284.6 690 33.8
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 2.9e-73 280.8 716 31.8
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 2.4e-72 277.7 711 32.5
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 2.4e-72 277.7 518 41.5
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 4.6e-71 273.5 686 33.4
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 2.3e-70 271.2 693 33.9
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.1e-69 268.9 424 40.8
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 1.1e-69 268.9 709 32.4
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 3.3e-69 267.3 722 31.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 3.1e-67 260.8 263 53.6
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 8.4e-65 252.7 710 32.7
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 8.4e-65 252.7 710 32.7
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.9e-64 251.5 687 32.0
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 4.2e-64 250.4 687 31.9
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 2.7e-63 247.7 697 32.6
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.3e-62 245.4 320 44.4
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 6.2e-60 236.5 479 40.3
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 8.1e-60 236.1 377 41.9
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 3.8e-57 227.3 432 38.4
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.4e-56 225.3 314 44.9
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 7.1e-56 223.0 212 57.1
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.2e-55 222.2 717 30.5
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 2.7e-55 221.1 702 30.8
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 7.9e-55 219.5 442 35.7
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 3.0e-54 217.6 721 28.7
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 3.0e-54 217.6 721 29.8
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 4.3e-53 213.8 380 38.4
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 7.4e-53 213.0 488 35.7
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.8e-51 208.4 318 41.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.3e-49 202.2 715 30.6
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 1.7e-49 201.8 261 46.0
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.3e-46 191.4 306 41.5
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.9e-45 188.3 367 36.5
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.8e-41 174.1 201 49.3
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 7.1e-40 169.9 313 42.2
DCAR_006240 Daucus carota HOM05D006280 ORTHO05D007876 1.5e-34 152.1 213 45.1
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.6e-34 151.4 136 56.6
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 4.5e-34 150.6 128 59.4
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 2.2e-33 148.3 173 53.8
Manes.07G004300 Manihot esculenta HOM05D006280 ORTHO05D007876 3.7e-28 131.0 356 32.3
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 1.3e-25 122.5 185 42.2
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 8.5e-25 119.8 722 25.5
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.5e-21 109.0 84 60.7
QL04p005379 Quercus lobata HOM05D000011 ORTHO05D007876 1.3e-20 105.9 250 38.0
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 2.4e-19 101.7 85 54.1
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 9.1e-19 99.8 149 41.6
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 7.7e-18 96.7 270 34.1
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 7.4e-13 80.1 170 37.1
THA.LOC109117177 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 9.1e-11 73.2 212 30.2
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.1e-08 66.2 80 40.0


User provided reference genes

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