Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01050 Erythranthe guttata HOM05D000451 ORTHO05D000351 1.1e-138 496.5 240 100.0
Migut.H00952 Erythranthe guttata HOM05D000451 ORTHO05D000351 7.9e-39 164.9 85 91.8
Migut.H00951 Erythranthe guttata HOM05D000451 ORTHO05D000351 2.9e-25 119.8 61 90.2
Migut.B01053 Erythranthe guttata HOM05D000451 ORTHO05D000351 5.5e-24 115.5 61 83.6
Migut.I00412 Erythranthe guttata HOM05D000451 ORTHO05D000351 1.2e-23 114.4 61 83.6
Migut.H00953 Erythranthe guttata HOM05D000451 ORTHO05D000351 1.9e-16 90.5 68 64.7
DCAR_028451 Daucus carota HOM05D000451 ORTHO05D000351 1.9e-08 63.9 45 57.8
EL10Ac9g22965 Beta vulgaris HOM05D000451 ORTHO05D000351 7.2e-08 62.0 48 56.2
Medtr1g114130 Medicago truncatula HOM05D000451 ORTHO05D000351 1.6e-07 60.8 80 40.0
Medtr1g114150 Medicago truncatula HOM05D000451 ORTHO05D000351 1.6e-07 60.8 68 47.1
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 2.1e-07 60.5 56 55.4
Phvul.007G016300 Phaseolus vulgaris HOM05D000451 ORTHO05D000351 2.1e-07 60.5 48 54.2
Duzib128G1458 Durio zibethinus HOM05D000451 ORTHO05D000351 3.6e-07 59.7 41 70.7
ATR0794G052 Amborella trichopoda HOM05D000451 ORTHO05D000351 4.7e-07 59.3 37 70.3
CDE05G1883 Ceratophyllum demersum HOM05D000451 ORTHO05D000351 4.7e-07 59.3 44 65.9
Dinv08027 Davidia involucrata HOM05D000451 ORTHO05D000351 4.7e-07 59.3 32 71.9
Psat6g233000 Pisum sativum HOM05D000451 ORTHO05D000351 4.7e-07 59.3 50 54.0
TAR371G0398 Trochodendron aralioides HOM05D000451 ORTHO05D000351 4.7e-07 59.3 63 44.4
Ah.01g001450 Amaranthus hybridus HOM05D000451 ORTHO05D000351 6.1e-07 58.9 34 70.6
Dinv20717 Davidia involucrata HOM05D000451 ORTHO05D000351 6.1e-07 58.9 38 65.8
Hma1.2p1_0988F.1_g244660 Hydrangea macrophylla HOM05D000451 ORTHO05D000351 6.1e-07 58.9 49 55.1
Hma1.2p1_0988F.1_g244665 Hydrangea macrophylla HOM05D000451 ORTHO05D000351 6.1e-07 58.9 49 55.1
MELO3C025053.2 Cucumis melo HOM05D000451 ORTHO05D000351 8.0e-07 58.5 52 53.8
Hund08611 Selenicereus undatus HOM05D000451 ORTHO05D000351 8.0e-07 58.5 34 70.6
Actinidia06570 Actinidia chinensis HOM05D000451 ORTHO05D000351 1.0e-06 58.2 83 36.1
EL10Ac9g22964 Beta vulgaris HOM05D000451 ORTHO05D000351 1.0e-06 58.2 34 70.6
EL10Ac9g22966 Beta vulgaris HOM05D000451 ORTHO05D000351 1.0e-06 58.2 34 70.6
CsaV3_5G020020 Cucumis sativus L. HOM05D000451 ORTHO05D000351 1.4e-06 57.8 49 53.1
TPR.G2415 Trifolium pratense HOM05D000451 ORTHO05D000351 1.4e-06 57.8 44 54.5
Aa31LG1G7680 Aethionema arabicum HOM05D000451 ORTHO05D000351 1.8e-06 57.4 76 40.8
CANSAT78G1853 Cannabis sativa HOM05D000451 ORTHO05D000351 1.8e-06 57.4 75 44.0
Glyma.10G284500 Glycine max HOM05D000451 ORTHO05D000351 1.8e-06 57.4 53 52.8
SalBow1G7142 Salvia bowleyana HOM05D000451 ORTHO05D000351 1.8e-06 57.4 102 39.2
Sed0001028 Sechium edule HOM05D000451 ORTHO05D000351 1.8e-06 57.4 52 53.8
Sc14g0003100 Simmondsia chinensis HOM05D000451 ORTHO05D000351 1.8e-06 57.4 58 50.0
TPR.G21299 Trifolium pratense HOM05D000451 ORTHO05D000351 1.8e-06 57.4 34 67.6
TPR.G4023 Trifolium pratense HOM05D000451 ORTHO05D000351 1.8e-06 57.4 34 67.6
CAN.G150.8 Capsicum annuum HOM05D000451 ORTHO05D000351 2.3e-06 57.0 32 68.8
AUR62017714 Chenopodium quinoa HOM05D000451 ORTHO05D000351 2.3e-06 57.0 59 49.2
AUR62032966 Chenopodium quinoa HOM05D000451 ORTHO05D000351 2.3e-06 57.0 59 49.2
Glyma.20G104900 Glycine max HOM05D000451 ORTHO05D000351 2.3e-06 57.0 47 57.4
Nitab4.5_0002269g0010 Nicotiana tabacum HOM05D000451 ORTHO05D000351 2.3e-06 57.0 48 56.2
Rhsim05G0169400 Rhododendron simsii HOM05D000451 ORTHO05D000351 2.3e-06 57.0 32 68.8
SGA_v2.0_scaffold54G19554 Striga asiatica HOM05D000451 ORTHO05D000351 2.3e-06 57.0 55 47.3
Aa31LG5G18200 Aethionema arabicum HOM05D000451 ORTHO05D000351 3.0e-06 56.6 33 69.7
CSS0027533 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 3.0e-06 56.6 37 64.9
Ciclev10030567m.g Citrus clementina HOM05D000451 ORTHO05D000351 3.0e-06 56.6 41 63.4
Solyc04g049140.4 Solanum lycopersicum HOM05D000451 ORTHO05D000351 3.0e-06 56.6 31 77.4
Sopen04g018580 Solanum pennellii HOM05D000451 ORTHO05D000351 3.0e-06 56.6 31 77.4
Oeu014707.2 Olea europaea HOM05D000451 ORTHO05D000351 3.9e-06 56.2 37 64.9
Psat6g233400 Pisum sativum HOM05D000451 ORTHO05D000351 3.9e-06 56.2 46 56.5
Thecc.02G157900 Theobroma cacao HOM05D000451 ORTHO05D000351 3.9e-06 56.2 83 42.2
Gohir.A03G165400 Gossypium hirsutum HOM05D000451 ORTHO05D000351 5.2e-06 55.8 34 70.6
Gohir.D02G188600 Gossypium hirsutum HOM05D000451 ORTHO05D000351 5.2e-06 55.8 34 70.6
Lalb_Chr18g0049491 Lupinus albus HOM05D000451 ORTHO05D000351 5.2e-06 55.8 52 50.0
Medtr1g069565 Medicago truncatula HOM05D000451 ORTHO05D000351 5.2e-06 55.8 29 72.4
TPR.G4095 Trifolium pratense HOM05D000451 ORTHO05D000351 5.2e-06 55.8 34 61.8
TWI38G0519 Tripterygium wilfordii HOM05D000451 ORTHO05D000351 5.2e-06 55.8 47 53.2
Ah.01g001430 Amaranthus hybridus HOM05D000451 ORTHO05D000351 6.7e-06 55.5 71 40.8
ATR0618G076 Amborella trichopoda HOM05D000451 ORTHO05D000351 6.7e-06 55.5 71 45.1
ClCG01G008180 Citrullus lanatus HOM05D000451 ORTHO05D000351 6.7e-06 55.5 49 53.1
Oeu037886.1 Olea europaea HOM05D000451 ORTHO05D000351 6.7e-06 55.5 77 39.0
PGR142G1486 Punica granatum HOM05D000451 ORTHO05D000351 6.7e-06 55.5 32 71.9
QL04p072824 Quercus lobata HOM05D000451 ORTHO05D000351 6.7e-06 55.5 79 34.2
Rhsim05G0169300 Rhododendron simsii HOM05D000451 ORTHO05D000351 6.7e-06 55.5 32 68.8
Sed0017533 Sechium edule HOM05D000451 ORTHO05D000351 6.7e-06 55.5 62 45.2
TAR629G3409 Trochodendron aralioides HOM05D000451 ORTHO05D000351 6.7e-06 55.5 39 59.0
CANSAT54G0887 Cannabis sativa HOM05D000451 ORTHO05D000351 8.8e-06 55.1 58 46.6
Duzib248G1089 Durio zibethinus HOM05D000451 ORTHO05D000351 8.8e-06 55.1 81 38.3
Lsat_1_v5_gn_5_69640 Lactuca sativa HOM05D000451 ORTHO05D000351 8.8e-06 55.1 73 42.5
Lj4A819G67 Lonicera japonica HOM05D000451 ORTHO05D000351 8.8e-06 55.1 38 60.5
Medtr1g114070 Medicago truncatula HOM05D000451 ORTHO05D000351 8.8e-06 55.1 75 38.7
Sc12g0006150 Simmondsia chinensis HOM05D000451 ORTHO05D000351 8.8e-06 55.1 32 68.8
Solyc08g065830.4 Solanum lycopersicum HOM05D000451 ORTHO05D051093 8.8e-06 55.1 31 71.0
VMungo0720G0380 Vigna mungo HOM05D000451 ORTHO05D000351 8.8e-06 55.1 35 62.9


User provided reference genes

Program Settings