Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01014 Erythranthe guttata HOM05D000592 ORTHO05D001485 3.3e-44 181.4 97 100.0
Migut.N00205 Erythranthe guttata HOM05D000592 ORTHO05D001485 1.7e-40 169.1 90 98.9
Migut.A01200 Erythranthe guttata HOM05D000592 ORTHO05D001485 2.7e-38 161.8 91 94.5
SalBow3G1720 Salvia bowleyana HOM05D000592 ORTHO05D001485 2.8e-27 125.2 90 67.8
MSTRG.21869 Avicennia marina HOM05D000592 ORTHO05D001485 6.4e-24 114.0 90 63.3
MSTRG.24729 Avicennia marina HOM05D000592 ORTHO05D001485 1.0e-21 106.7 91 57.1
SGA_v2.0_scaffold308G48125 Striga asiatica HOM05D000592 ORTHO05D001485 1.0e-21 106.7 90 58.9
SGA_v2.0_scaffold79G25590 Striga asiatica HOM05D000592 ORTHO05D001485 1.0e-21 106.7 90 58.9
Migut.G00371 Erythranthe guttata HOM05D000592 ORTHO05D001485 4.5e-17 91.3 91 51.6
MSTRG.9961 Avicennia marina HOM05D000592 ORTHO05D001485 1.0e-16 90.1 91 53.8
SGA_v2.0_scaffold151G36703 Striga asiatica HOM05D000592 ORTHO05D001485 2.7e-14 82.0 89 50.6
GSVIVG01018023001 Vitis vinifera HOM05D000592 ORTHO05D001485 2.7e-14 82.0 92 47.8
CSS0037517 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 3.5e-14 81.6 91 50.5
FvH4_4g00822 Fragaria vesca HOM05D000592 ORTHO05D001485 3.5e-14 81.6 91 53.8
RcHm_v2.0_Chr4g0387381 Rosa chinensis HOM05D000592 ORTHO05D001485 6.0e-14 80.9 91 53.8
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 6.0e-14 80.9 89 48.3
MSTRG.4052 Avicennia marina HOM05D000592 ORTHO05D001485 7.9e-14 80.5 90 48.9
Actinidia40125 Actinidia chinensis HOM05D000592 ORTHO05D001485 1.0e-13 80.1 92 47.8
FAN22G2244 Fragaria x ananassa HOM05D000592 ORTHO05D001485 1.8e-13 79.3 91 52.7
Dinv14033 Davidia involucrata HOM05D000592 ORTHO05D001485 2.3e-13 79.0 92 46.7
Prupe.1G019400 Prunus persica HOM05D000592 ORTHO05D001485 2.3e-13 79.0 89 49.4
Sopen09g031370 Solanum pennellii HOM05D000592 ORTHO05D001485 3.9e-13 78.2 91 48.4
Nitab4.5_0000050g0270 Nicotiana tabacum HOM05D000592 ORTHO05D001485 1.1e-12 76.6 89 47.2
Nitab4.5_0000085g0270 Nicotiana tabacum HOM05D000592 ORTHO05D001485 1.1e-12 76.6 92 47.8
Nitab4.5_0002430g0030 Nicotiana tabacum HOM05D000592 ORTHO05D001485 1.1e-12 76.6 90 50.0
Peaxi162Scf00245g01313 Petunia axillaris HOM05D000592 ORTHO05D001485 1.5e-12 76.3 94 47.9
Solyc09g082510.3 Solanum lycopersicum HOM05D000592 ORTHO05D001485 1.5e-12 76.3 91 48.4
PGSC0003DMG400007687 Solanum tuberosum HOM05D000592 ORTHO05D001485 1.9e-12 75.9 91 48.4
CSS0026924 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 2.5e-12 75.5 91 48.4
Cc03_g04140 Coffea canephora HOM05D000592 ORTHO05D001485 2.5e-12 75.5 92 46.7
Nitab4.5_0003249g0050 Nicotiana tabacum HOM05D000592 ORTHO05D001485 4.3e-12 74.7 92 46.7
unitig_749.g14075 Utricularia gibba HOM05D000592 ORTHO05D001485 9.7e-12 73.6 91 44.0
CSS0037955 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 1.6e-11 72.8 92 44.6
Rhsim04G0199200 Rhododendron simsii HOM05D000592 ORTHO05D001485 1.6e-11 72.8 94 46.8
MD16G1197900 Malus domestica HOM05D000592 ORTHO05D001485 2.2e-11 72.4 90 47.8
MD13G1197900 Malus domestica HOM05D000592 ORTHO05D001485 3.7e-11 71.6 90 47.8
Oeu008870.1 Olea europaea HOM05D000592 ORTHO05D001485 3.7e-11 71.6 90 50.0
DCAR_030679 Daucus carota HOM05D000592 ORTHO05D001485 6.3e-11 70.9 92 43.5
Actinidia23535 Actinidia chinensis HOM05D000592 ORTHO05D001485 8.2e-11 70.5 85 45.9
Peaxi162Scf00520g00613 Petunia axillaris HOM05D000592 ORTHO05D001485 1.1e-10 70.1 92 45.7
QL06p001382 Quercus lobata HOM05D000592 ORTHO05D001485 1.4e-10 69.7 92 41.3
vmacro08360 Vaccinium macrocarpon HOM05D000592 ORTHO05D001485 1.8e-10 69.3 94 43.6
DCAR_024179 Daucus carota HOM05D000592 ORTHO05D001485 5.3e-10 67.8 91 42.9
PSO675G3983 Papaver somniferum HOM05D000592 ORTHO05D001485 9.0e-10 67.0 92 44.6
TAR365G0678 Trochodendron aralioides HOM05D000592 ORTHO05D001485 1.5e-09 66.2 92 43.5
TAR633G1270 Trochodendron aralioides HOM05D000592 ORTHO05D001485 2.0e-09 65.9 92 42.4
Phvul.007G060600 Phaseolus vulgaris HOM05D000592 ORTHO05D001485 3.4e-09 65.1 92 40.2
CiPaw.01G197200 Carya illinoinensis HOM05D000592 ORTHO05D001485 5.9e-09 64.3 92 39.1
Potri.008G156200 Populus trichocarpa HOM05D000592 ORTHO05D001485 5.9e-09 64.3 91 41.8
PGSC0003DMG400028772 Solanum tuberosum HOM05D000592 ORTHO05D001485 7.6e-09 63.9 91 40.7
Sopen10g014450 Solanum pennellii HOM05D000592 ORTHO05D001485 1.0e-08 63.5 95 41.1
Aqoxy5G00422 Aquilegia oxysepala HOM05D000592 ORTHO05D001485 1.3e-08 63.2 92 37.0
Glyma.10G245400 Glycine max HOM05D000592 ORTHO05D001485 1.7e-08 62.8 92 40.2
PSO732G0432 Papaver somniferum HOM05D000592 ORTHO05D001485 1.7e-08 62.8 93 44.1
Potri.005G213400 Populus trichocarpa HOM05D000592 ORTHO05D001485 1.7e-08 62.8 92 39.1
Thecc.04G236700 Theobroma cacao HOM05D000592 ORTHO05D001485 2.2e-08 62.4 87 41.4
CANSAT25G0057 Cannabis sativa HOM05D000592 ORTHO05D001485 3.8e-08 61.6 93 37.6
CSS0042524 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 5.0e-08 61.2 90 41.1
Haze_11215 Corylus avellana HOM05D000592 ORTHO05D001485 5.0e-08 61.2 92 41.3
Gorai.004G217300 Gossypium raimondii HOM05D000592 ORTHO05D001485 6.5e-08 60.8 92 39.1
Solyc10g045290.2 Solanum lycopersicum HOM05D000592 ORTHO05D001485 6.5e-08 60.8 95 40.0
COL.COLO4_21542 Corchorus olitorius HOM05D000592 ORTHO05D001485 8.5e-08 60.5 85 44.7
Lj5g0004600 Lotus japonicus HOM05D000592 ORTHO05D001485 8.5e-08 60.5 92 40.2
Nn6g34135 Nelumbo nucifera HOM05D000592 ORTHO05D001485 8.5e-08 60.5 91 37.4
Cfa008459 Carpinus fangiana HOM05D000592 ORTHO05D001485 1.1e-07 60.1 91 41.8
RcHm_v2.0_Chr6g0290321 Rosa chinensis HOM05D000592 ORTHO05D001485 1.1e-07 60.1 96 37.5
TAR362G0063 Trochodendron aralioides HOM05D000592 ORTHO05D001485 1.1e-07 60.1 91 39.6
VMungo0720G2930 Vigna mungo HOM05D000592 ORTHO05D001485 1.1e-07 60.1 92 39.1
GSVIVG01001195001 Vitis vinifera HOM05D000592 ORTHO05D001485 1.1e-07 60.1 91 39.6
Glyma.20G149200 Glycine max HOM05D000592 ORTHO05D001485 1.4e-07 59.7 92 41.3
Gohir.D08G205300 Gossypium hirsutum HOM05D000592 ORTHO05D001485 1.4e-07 59.7 92 38.0
Prupe.8G236300 Prunus persica HOM05D000592 ORTHO05D001485 1.4e-07 59.7 92 37.0
CANSAT78G1002 Cannabis sativa HOM05D000592 ORTHO05D001485 1.9e-07 59.3 93 40.9
Duzib211G0338 Durio zibethinus HOM05D000592 ORTHO05D001485 1.9e-07 59.3 92 37.0
Potri.002G049600 Populus trichocarpa HOM05D000592 ORTHO05D001485 1.9e-07 59.3 92 39.1
Sabra10G0059700 Salix brachista HOM05D000592 ORTHO05D001485 1.9e-07 59.3 92 37.0
Lalb_Chr21g0304761 Lupinus albus HOM05D000592 ORTHO05D001485 2.5e-07 58.9 92 37.0
Ciclev10004130m.g Citrus clementina HOM05D000592 ORTHO05D001485 3.2e-07 58.5 90 40.0
Duzib212G0402 Durio zibethinus HOM05D000592 ORTHO05D001485 3.2e-07 58.5 85 42.4
Manes.05G080300 Manihot esculenta HOM05D000592 ORTHO05D001485 3.2e-07 58.5 92 37.0
Manes.15G031600 Manihot esculenta HOM05D000592 ORTHO05D001485 3.2e-07 58.5 92 43.5
Medtr1g071540 Medicago truncatula HOM05D000592 ORTHO05D001485 3.2e-07 58.5 92 39.1
Sabra05G0163100 Salix brachista HOM05D000592 ORTHO05D001485 3.2e-07 58.5 92 37.0
Glyma.01G232901 Glycine max HOM05D000592 ORTHO05D001485 4.2e-07 58.2 93 37.6
Glyma.01G236400 Glycine max HOM05D000592 ORTHO05D001485 4.2e-07 58.2 93 37.6
Gohir.A08G187000 Gossypium hirsutum HOM05D000592 ORTHO05D001485 5.5e-07 57.8 92 37.0
CSS0032582 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 9.3e-07 57.0 59 52.5
AUR62034737 Chenopodium quinoa HOM05D000592 ORTHO05D001485 9.3e-07 57.0 91 34.1
COL.COLO4_09053 Corchorus olitorius HOM05D000592 ORTHO05D001485 9.3e-07 57.0 92 37.0
Duzib151G0506 Durio zibethinus HOM05D000592 ORTHO05D001485 9.3e-07 57.0 91 39.6
Potri.010G083300 Populus trichocarpa HOM05D000592 ORTHO05D001485 9.3e-07 57.0 92 39.1
Duzib133G0925 Durio zibethinus HOM05D000592 ORTHO05D001485 1.2e-06 56.6 92 37.0
Glyma.11G006800 Glycine max HOM05D000592 ORTHO05D001485 1.2e-06 56.6 93 37.6
VMungo1215G1460 Vigna mungo HOM05D000592 ORTHO05D001485 1.2e-06 56.6 93 35.5
Lj1A50G82 Lonicera japonica HOM05D000592 ORTHO05D001485 1.6e-06 56.2 91 39.6
CiPaw.02G122400 Carya illinoinensis HOM05D000592 ORTHO05D001485 2.1e-06 55.8 93 38.7
FvH4_2g23102 Fragaria vesca HOM05D000592 ORTHO05D001485 2.1e-06 55.8 97 34.0
FAN24G2442 Fragaria x ananassa HOM05D000592 ORTHO05D001485 2.1e-06 55.8 97 34.0
TWI18G0970 Tripterygium wilfordii HOM05D000592 ORTHO05D001485 2.1e-06 55.8 92 37.0
Atru.chr4.2386 Acer truncatum HOM05D000592 ORTHO05D001485 2.7e-06 55.5 94 38.3
Cpa.g.sc58.60 Carica papaya HOM05D000592 ORTHO05D001485 2.7e-06 55.5 94 40.4
Duzib138G1205 Durio zibethinus HOM05D000592 ORTHO05D001485 2.7e-06 55.5 92 35.9
FAN27G2684 Fragaria x ananassa HOM05D000592 ORTHO05D001485 3.6e-06 55.1 97 34.0
arahy.Tifrunner.gnm1.ann1.AFV0LT Arachis hypogaea HOM05D000592 ORTHO05D001485 6.1e-06 54.3 92 35.9
arahy.Tifrunner.gnm1.ann1.C4CAJP Arachis hypogaea HOM05D000592 ORTHO05D001485 6.1e-06 54.3 92 35.9
Cfa006181 Carpinus fangiana HOM05D000592 ORTHO05D001485 6.1e-06 54.3 92 34.8
Haze_04665 Corylus avellana HOM05D000592 ORTHO05D001485 6.1e-06 54.3 92 35.9
TPR.G25701 Trifolium pratense HOM05D000592 ORTHO05D001485 6.1e-06 54.3 92 35.9
Actinidia24918 Actinidia chinensis HOM05D000592 ORTHO05D001485 7.9e-06 53.9 91 35.2
Psat6g059600 Pisum sativum HOM05D000592 ORTHO05D001485 7.9e-06 53.9 92 35.9
Thecc.01G273300 Theobroma cacao HOM05D000592 ORTHO05D001485 7.9e-06 53.9 92 34.8
TWI12G0883 Tripterygium wilfordii HOM05D000592 ORTHO05D001485 7.9e-06 53.9 92 39.1


User provided reference genes

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