Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 6.2e-98 360.9 199 100.0
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 5.2e-44 181.8 131 79.4
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.2e-42 176.4 207 57.5
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 2.0e-40 169.9 191 56.5
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 2.0e-40 169.9 139 71.2
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 1.3e-39 167.2 195 54.4
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 2.5e-38 162.9 190 54.7
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 9.4e-38 161.0 148 58.1
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 1.6e-37 160.2 150 64.0
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.6e-37 160.2 138 68.8
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 2.7e-37 159.5 190 53.7
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 6.1e-37 158.3 206 54.9
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 6.1e-37 158.3 146 61.6
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 8.0e-37 157.9 140 64.3
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 1.0e-36 157.5 203 53.2
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 1.8e-36 156.8 109 71.6
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 1.8e-36 156.8 205 50.2
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 2.3e-36 156.4 190 54.2
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 2.3e-36 156.4 108 72.2
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 2.3e-36 156.4 162 55.6
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 3.0e-36 156.0 182 54.9
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 3.0e-36 156.0 109 69.7
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 3.0e-36 156.0 184 51.1
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 5.2e-36 155.2 109 67.9
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 5.2e-36 155.2 108 75.0
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 5.2e-36 155.2 108 75.0
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 6.8e-36 154.8 148 60.1
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 8.8e-36 154.5 171 58.5
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 8.8e-36 154.5 208 45.7
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 1.2e-35 154.1 186 55.4
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 1.2e-35 154.1 109 67.9
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 1.5e-35 153.7 183 53.6
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 1.5e-35 153.7 109 68.8
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 1.5e-35 153.7 109 68.8
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 1.5e-35 153.7 203 53.7
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 2.0e-35 153.3 191 55.5
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 2.0e-35 153.3 146 62.3
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 2.6e-35 152.9 90 81.1
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 3.4e-35 152.5 107 68.2
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 4.4e-35 152.1 108 67.6
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 4.4e-35 152.1 165 59.4
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 4.4e-35 152.1 108 68.5
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 4.4e-35 152.1 108 70.4
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 5.7e-35 151.8 108 68.5
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 5.7e-35 151.8 109 69.7
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 5.7e-35 151.8 144 65.3
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 7.5e-35 151.4 109 67.0
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 9.8e-35 151.0 165 62.4
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 9.8e-35 151.0 191 53.9
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 1.3e-34 150.6 149 60.4
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 1.7e-34 150.2 109 69.7
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 1.7e-34 150.2 109 69.7
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 1.7e-34 150.2 190 52.1
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 2.2e-34 149.8 107 68.2
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 2.2e-34 149.8 167 58.7
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 2.8e-34 149.4 110 63.6
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 3.7e-34 149.1 110 63.6
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 6.3e-34 148.3 110 64.5
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 6.3e-34 148.3 163 57.7
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.4e-33 147.1 147 59.2
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 1.4e-33 147.1 163 57.1
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.8e-33 146.7 147 59.9
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 1.8e-33 146.7 214 44.4
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 1.8e-33 146.7 108 68.5
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.4e-33 146.4 207 47.3
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 2.4e-33 146.4 206 46.6
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 2.4e-33 146.4 164 50.6
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 5.4e-33 145.2 147 58.5
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 7.0e-33 144.8 107 66.4
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 9.1e-33 144.4 170 55.9
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 1.6e-32 143.7 110 66.4
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.6e-32 143.7 147 58.5
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 4.5e-32 142.1 108 65.7
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 5.9e-32 141.7 198 48.0
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 7.7e-32 141.4 200 48.0
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 1.0e-31 141.0 109 62.4
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 6.5e-31 138.3 100 68.0
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 8.5e-31 137.9 149 50.3
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.5e-30 136.3 89 70.8
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 8.0e-29 131.3 226 47.3
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 1.0e-28 131.0 103 60.2
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 1.0e-28 131.0 85 77.6
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.3e-26 124.0 96 68.8
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 2.2e-26 123.2 195 46.7
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 2.8e-26 122.9 204 45.6
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 1.1e-25 120.9 243 42.0
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 5.9e-24 115.2 94 73.4
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 2.3e-23 113.2 93 72.0
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 1.8e-20 103.6 89 58.4
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 2.3e-20 103.2 106 51.9
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 2.3e-20 103.2 106 51.9
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 3.0e-20 102.8 87 58.6
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 3.0e-20 102.8 93 69.9
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 5.2e-20 102.1 87 58.6
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 6.8e-20 101.7 106 53.8
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 6.8e-20 101.7 89 57.3
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 6.8e-20 101.7 89 56.2
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 8.9e-20 101.3 118 51.7
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 1.2e-19 100.9 87 57.5
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 1.5e-19 100.5 105 49.5
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 1.5e-19 100.5 89 55.1
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 2.0e-19 100.1 113 47.8
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 3.4e-19 99.4 87 55.2
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 3.4e-19 99.4 71 64.8
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 4.4e-19 99.0 88 59.1
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 5.7e-19 98.6 93 71.0
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 5.7e-19 98.6 87 55.2
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 7.5e-19 98.2 89 52.8
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.3e-18 97.4 85 55.3
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 1.3e-18 97.4 85 55.3
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 1.7e-18 97.1 87 52.9
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.2e-18 96.7 87 54.0
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 2.2e-18 96.7 94 54.3
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 2.2e-18 96.7 94 54.3
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 2.2e-18 96.7 94 54.3
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 2.9e-18 96.3 89 56.2
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 4.9e-18 95.5 86 57.0
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 4.9e-18 95.5 86 57.0
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 4.9e-18 95.5 94 54.3
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 6.4e-18 95.1 94 53.2
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 6.4e-18 95.1 106 46.2
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 8.3e-18 94.7 94 54.3
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 1.1e-17 94.4 60 76.7
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 1.1e-17 94.4 106 47.2
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 1.1e-17 94.4 87 49.4
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 1.4e-17 94.0 156 47.4
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 1.8e-17 93.6 85 54.1
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 1.8e-17 93.6 87 54.0
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.4e-17 93.2 160 40.6
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 3.2e-17 92.8 87 50.6
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 4.1e-17 92.4 89 56.2
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 4.1e-17 92.4 87 54.0
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 5.4e-17 92.0 189 41.8
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 7.0e-17 91.7 94 52.1
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 7.0e-17 91.7 87 54.0
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 7.0e-17 91.7 87 52.9
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 7.0e-17 91.7 123 43.9
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 9.2e-17 91.3 139 53.2
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 9.2e-17 91.3 90 52.2
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 1.6e-16 90.5 87 49.4
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 1.6e-16 90.5 187 42.2
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 2.0e-16 90.1 94 51.1
Haze_10292 Corylus avellana HOM05D004087 ORTHO05D004787 3.5e-16 89.4 277 36.1
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 3.5e-16 89.4 67 68.7
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.7e-15 87.0 109 46.8
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.3e-15 86.7 112 42.9
RhsimUnG0040800 Rhododendron simsii HOM05D004087 ORTHO05D004787 8.6e-15 84.7 100 46.0
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 1.9e-14 83.6 89 50.6
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 2.1e-13 80.1 76 52.6
AUR62030868 Chenopodium quinoa HOM05D004087 ORTHO05D004787 2.8e-13 79.7 88 53.4
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 1.1e-12 77.8 89 48.3
Lj5A221T58 Lonicera japonica HOM05D004087 ORTHO05D004787 1.4e-12 77.4 125 52.0
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 1.4e-12 77.4 87 47.1
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 2.0e-11 73.6 85 38.8
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 1.3e-10 70.9 128 33.6
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 1.9e-09 67.0 63 58.7
Lsat_1_v5_gn_3_112521 Lactuca sativa HOM05D004087 ORTHO05D004787 2.4e-09 66.6 102 52.0
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 2.0e-08 63.5 106 38.7
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 4.6e-08 62.4 65 52.3
Lsat_1_v5_gn_9_118200 Lactuca sativa HOM05D004087 ORTHO05D004787 6.0e-08 62.0 102 49.0
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 2.3e-07 60.1 67 49.3
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 1.1e-06 57.8 52 53.8
Cpa.g.sc106.30 Carica papaya HOM05D004087 ORTHO05D004787 1.5e-06 57.4 81 54.3
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 4.3e-06 55.8 72 44.4


User provided reference genes

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