Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 6.5e-290 1000.0 487 100.0
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 6.4e-205 717.6 498 71.9
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 7.1e-204 714.1 496 71.8
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 4.3e-201 704.9 487 72.9
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.7e-194 682.9 497 69.2
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 3.8e-181 638.6 501 63.9
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.9e-181 638.3 496 63.7
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 5.1e-178 628.2 494 63.6
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 5.1e-178 628.2 494 63.6
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.9e-177 626.3 487 63.9
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 5.6e-177 624.8 498 61.6
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.2e-174 617.1 493 62.5
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 3.4e-174 615.5 495 63.4
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.5e-174 615.1 490 62.4
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 3.8e-173 612.1 479 63.7
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 3.8e-173 612.1 489 63.0
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 3.8e-173 612.1 482 63.1
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.1e-172 610.5 496 62.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.4e-172 610.1 478 63.0
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 2.7e-171 605.9 476 62.6
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 3.5e-171 605.5 488 62.7
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.5e-171 605.5 480 62.7
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 4.6e-171 605.1 481 62.0
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 6.0e-171 604.7 476 62.0
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.3e-170 602.8 496 60.7
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 9.6e-169 597.4 476 62.8
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 9.6e-169 597.4 492 61.2
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 9.6e-169 597.4 485 62.1
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 9.6e-169 597.4 498 61.2
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 9.6e-169 597.4 490 62.2
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.1e-168 596.3 479 62.6
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.4e-167 593.6 482 61.4
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.4e-167 592.8 471 63.1
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 3.1e-167 592.4 491 60.9
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 4.1e-167 592.0 492 60.2
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.6e-166 589.3 476 62.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 2.6e-166 589.3 475 60.0
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 5.9e-166 588.2 484 61.8
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 5.9e-166 588.2 519 56.1
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.0e-165 587.4 493 60.6
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.3e-165 587.0 493 60.0
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 2.2e-165 586.3 484 61.6
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 3.8e-165 585.5 479 59.3
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 4.2e-164 582.0 486 59.9
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 7.2e-164 581.3 474 61.0
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.7e-163 579.3 527 57.9
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 3.6e-163 578.9 458 62.2
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 6.1e-163 578.2 489 59.7
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 5.1e-162 575.1 486 59.7
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 8.7e-162 574.3 488 59.2
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.7e-162 574.3 455 63.1
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.9e-161 573.2 513 56.9
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.1e-159 567.4 468 62.0
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 1.8e-159 566.6 507 56.8
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 5.3e-159 565.1 478 59.4
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.2e-158 563.9 419 66.6
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.5e-158 562.0 416 66.8
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 7.7e-158 561.2 492 58.3
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.0e-157 560.8 490 58.6
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.3e-157 560.5 495 58.0
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 1.7e-157 560.1 462 61.7
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 6.5e-157 558.1 492 57.7
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 8.5e-157 557.8 479 58.2
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 8.5e-157 557.8 479 58.2
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.4e-156 557.0 489 58.3
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 1.4e-156 557.0 492 57.9
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 5.5e-156 555.1 485 58.1
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.6e-155 553.5 479 58.2
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.6e-155 553.5 509 56.0
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.1e-155 553.1 488 57.8
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 3.6e-155 552.4 476 58.8
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 6.1e-155 551.6 482 58.5
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 7.9e-155 551.2 494 56.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 1.4e-154 550.4 484 57.9
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 3.9e-154 548.9 479 58.5
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 2.6e-153 546.2 488 57.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 4.4e-153 545.4 486 58.4
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 5.7e-153 545.0 524 53.2
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 2.2e-152 543.1 470 57.7
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 4.8e-152 542.0 460 57.8
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.4e-151 539.7 450 58.7
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 6.9e-151 538.1 505 55.0
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.2e-150 537.3 479 57.2
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.0e-150 536.6 499 57.5
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.4e-150 535.8 413 62.7
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 4.5e-150 535.4 489 55.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 5.0e-149 531.9 482 57.9
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 6.7e-146 521.5 493 54.0
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 2.6e-142 509.6 474 56.1
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 2.2e-141 506.5 510 52.5
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 3.8e-141 505.8 507 54.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 5.5e-140 501.9 454 56.6
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.3e-138 496.5 498 52.4
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 9.1e-135 484.6 485 53.4
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.7e-134 483.0 522 50.6
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 2.7e-134 483.0 522 50.6
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.3e-122 443.4 475 47.8
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 9.2e-119 431.4 552 44.9
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.5e-118 429.1 313 67.7
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.9e-116 423.7 432 53.5
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 5.6e-116 422.2 544 43.4
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 2.8e-115 419.9 478 50.4
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.4e-114 417.5 396 54.5
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.1e-103 381.3 463 45.1
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.9e-103 380.6 356 56.2
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 4.6e-102 375.9 405 50.4
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 8.3e-96 355.1 274 63.9
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 8.1e-91 338.6 489 42.9
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.1e-90 336.7 350 53.4
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 8.7e-77 292.0 280 53.2
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 7.6e-65 252.3 143 79.7
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 2.3e-61 240.7 327 38.8
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.4e-58 231.5 306 46.4
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.7e-56 224.6 409 32.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.9e-47 194.5 826 24.0
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.1e-42 176.8 149 60.4
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.4e-37 161.8 338 31.7
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.0e-33 147.9 95 72.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.0e-29 134.0 77 79.2
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 3.0e-29 134.0 138 54.3
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.8e-13 81.6 144 36.1
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.8e-10 71.6 60 55.0


User provided reference genes

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