Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 3.4e-74 281.6 143 100.0
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 4.1e-51 204.9 132 78.8
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.2e-50 203.4 122 81.1
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 1.7e-49 199.5 130 76.9
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 6.1e-47 191.0 114 80.7
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.5e-45 186.4 114 76.3
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 1.4e-43 179.9 118 72.0
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.8e-43 179.5 115 75.7
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 5.4e-43 177.9 116 73.3
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 2.7e-42 175.6 113 75.2
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 3.5e-42 175.3 114 72.8
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 5.9e-42 174.5 113 71.7
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 7.7e-42 174.1 114 71.9
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 1.0e-41 173.7 115 71.3
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 2.3e-41 172.6 114 72.8
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 3.8e-41 171.8 113 69.9
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 8.6e-41 170.6 113 72.6
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 8.6e-41 170.6 113 72.6
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 8.6e-41 170.6 113 72.6
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 8.6e-41 170.6 114 69.3
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.1e-40 170.2 114 72.8
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 1.9e-40 169.5 113 71.7
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 2.5e-40 169.1 128 63.3
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 4.2e-40 168.3 115 69.6
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 5.5e-40 167.9 120 68.3
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 9.5e-40 167.2 117 68.4
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 1.2e-39 166.8 115 69.6
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 1.2e-39 166.8 115 69.6
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.2e-39 166.8 113 70.8
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 2.1e-39 166.0 113 69.9
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 2.8e-39 165.6 112 70.5
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 3.6e-39 165.2 114 67.5
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 3.6e-39 165.2 114 68.4
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 1.0e-38 163.7 113 67.3
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.2e-38 161.4 115 67.0
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 8.9e-38 160.6 119 63.9
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 1.5e-37 159.8 113 66.4
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 4.4e-37 158.3 113 65.5
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 7.5e-37 157.5 130 60.0
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 9.8e-37 157.1 113 67.3
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 1.7e-36 156.4 105 72.4
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 1.7e-36 156.4 105 72.4
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 1.7e-36 156.4 114 66.7
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 1.7e-36 156.4 136 64.7
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 2.2e-36 156.0 148 54.7
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 2.2e-36 156.0 113 67.3
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 2.8e-36 155.6 113 66.4
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.7e-36 155.2 114 65.8
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 3.7e-36 155.2 120 63.3
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 6.3e-36 154.5 114 66.7
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 6.3e-36 154.5 118 62.7
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 1.1e-35 153.7 125 64.0
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 1.4e-35 153.3 104 71.2
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 2.4e-35 152.5 115 60.9
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 3.1e-35 152.1 118 64.4
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 4.1e-35 151.8 114 64.0
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 5.4e-35 151.4 119 60.5
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.2e-34 150.2 116 64.7
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 1.6e-34 149.8 122 65.6
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 3.5e-34 148.7 113 63.7
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 3.5e-34 148.7 130 59.2
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 7.8e-34 147.5 113 63.7
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 7.8e-34 147.5 113 63.7
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 1.0e-33 147.1 113 63.7
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 1.0e-33 147.1 113 63.7
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 1.0e-33 147.1 118 62.7
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 1.3e-33 146.7 121 62.0
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 1.3e-33 146.7 113 62.8
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 1.3e-33 146.7 113 62.8
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 1.3e-33 146.7 113 62.8
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 1.3e-33 146.7 113 62.8
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 2.3e-33 146.0 113 62.8
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 2.3e-33 146.0 113 62.8
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 2.3e-33 146.0 111 63.1
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 2.9e-33 145.6 113 62.8
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 2.9e-33 145.6 113 62.8
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 2.9e-33 145.6 113 62.8
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 2.9e-33 145.6 116 61.2
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 3.8e-33 145.2 105 65.7
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 5.0e-33 144.8 105 64.8
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 6.6e-33 144.4 113 61.9
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 6.6e-33 144.4 113 62.8
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 6.6e-33 144.4 114 59.6
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 8.6e-33 144.1 125 53.6
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 1.9e-32 142.9 113 61.1
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 1.9e-32 142.9 113 63.7
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 2.5e-32 142.5 128 56.2
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 4.3e-32 141.7 113 62.8
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 7.3e-32 141.0 114 62.3
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 2.8e-31 139.0 110 61.8
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 6.1e-31 137.9 120 61.7
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.4e-30 136.7 114 59.6
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.8e-30 136.3 114 61.4
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 2.3e-30 136.0 124 56.5
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 3.7e-28 128.6 101 60.4
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.1e-27 127.1 114 55.3
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 3.2e-27 125.6 117 53.8
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 1.2e-26 123.6 106 59.4
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 2.5e-24 115.9 109 56.9
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 4.7e-23 111.7 75 70.7
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 3.1e-22 109.0 109 56.0
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 7.5e-21 104.4 69 68.1
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 2.2e-20 102.8 155 44.5
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 2.9e-20 102.4 142 45.8
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 6.4e-20 101.3 109 44.0
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 6.0e-18 94.7 121 46.3
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 7.3e-16 87.8 107 44.9
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 2.8e-15 85.9 124 41.1
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-14 83.2 127 40.9
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 8.9e-14 80.9 132 35.6
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 1.5e-13 80.1 116 40.5
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-13 79.0 139 34.5
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-13 79.0 111 42.3
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-12 77.0 115 34.8
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 3.7e-12 75.5 117 35.9
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 4.1e-11 72.0 117 35.0
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 7.1e-11 71.2 111 40.5
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 9.2e-11 70.9 119 40.3
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-10 70.5 110 36.4
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 2.1e-10 69.7 91 40.7
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-10 69.3 116 39.7
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 3.5e-10 68.9 134 32.1
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 6.0e-10 68.2 126 34.1
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 1.7e-09 66.6 129 31.8
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 3.9e-09 65.5 119 40.3
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 5.1e-09 65.1 93 39.8
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 5.1e-09 65.1 38 78.9
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 1.9e-08 63.2 73 43.8
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.9e-08 63.2 113 34.5
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 4.3e-08 62.0 104 35.6
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 5.6e-08 61.6 64 54.7
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 7.3e-08 61.2 114 33.3
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 1.2e-07 60.5 75 41.3
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.6e-07 60.1 104 35.6
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 2.1e-07 59.7 122 30.3
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 8.1e-07 57.8 127 29.1
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 4.0e-06 55.5 81 37.0
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 5.2e-06 55.1 124 27.4


User provided reference genes

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