Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.1e-243 846.3 436 100.0
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 2.5e-168 595.9 444 71.8
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 8.4e-164 580.9 440 72.3
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 5.3e-142 508.4 447 62.2
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 9.0e-142 507.7 437 62.9
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 4.5e-141 505.4 440 63.2
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.0e-140 504.2 444 62.8
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.0e-140 504.2 438 62.3
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 2.2e-140 503.1 438 62.1
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.1e-139 500.7 448 60.7
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.6e-138 496.9 337 75.1
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 2.1e-135 486.5 454 60.4
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 9.0e-134 481.1 369 67.5
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 3.4e-133 479.2 440 61.8
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 7.6e-133 478.0 409 61.6
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 3.8e-132 475.7 438 59.6
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 4.9e-132 475.3 370 66.2
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 3.2e-131 472.6 396 63.1
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 3.2e-131 472.6 413 61.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 1.3e-129 467.2 432 59.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 2.3e-129 466.5 443 58.7
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 7.4e-128 461.5 384 64.6
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 4.8e-127 458.8 428 59.1
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 6.3e-127 458.4 429 59.0
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 8.2e-127 458.0 380 64.7
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.4e-126 457.2 391 62.4
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.8e-126 456.8 461 56.0
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.1e-126 455.7 371 63.9
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 2.0e-125 453.4 379 63.3
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 2.6e-125 453.0 417 60.4
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 3.4e-125 452.6 344 69.2
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 4.5e-125 452.2 441 56.2
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 5.9e-125 451.8 369 64.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 7.7e-125 451.4 375 65.9
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.3e-124 450.7 374 62.6
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.7e-124 450.3 525 51.6
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.8e-124 449.1 369 64.8
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 1.9e-123 446.8 369 64.8
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 3.2e-123 446.0 429 58.0
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 3.2e-123 446.0 354 67.5
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 7.2e-123 444.9 375 65.1
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 1.2e-122 444.1 385 62.9
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 2.1e-122 443.4 378 62.2
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 2.1e-122 443.4 394 61.4
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 3.6e-122 442.6 444 57.9
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 4.6e-122 442.2 347 64.8
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 6.1e-122 441.8 411 57.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 6.1e-122 441.8 333 67.3
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 6.1e-122 441.8 432 58.8
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 7.9e-122 441.4 386 60.4
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 1.8e-121 440.3 384 61.2
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.0e-121 439.5 355 63.4
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 3.0e-121 439.5 347 64.8
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 3.0e-121 439.5 370 64.3
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 3.3e-120 436.0 397 59.4
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 4.3e-120 435.6 436 58.3
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 5.7e-120 435.3 372 64.0
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.3e-119 434.1 449 57.5
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.3e-119 434.1 396 61.1
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 3.7e-119 432.6 381 60.6
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 6.3e-119 431.8 374 61.8
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.4e-118 430.6 372 61.8
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.4e-118 430.6 375 62.4
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 1.8e-118 430.3 373 62.2
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 2.4e-118 429.9 345 64.6
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 2.4e-118 429.9 373 61.4
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 3.1e-118 429.5 376 62.2
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 9.1e-118 427.9 366 61.5
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.5e-117 427.2 404 59.4
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 2.6e-117 426.4 346 65.6
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 4.5e-117 425.6 450 56.2
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.7e-116 423.7 373 61.4
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.7e-116 423.7 354 63.3
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 6.5e-116 421.8 450 55.6
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 6.5e-116 421.8 438 55.9
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.1e-115 421.0 354 62.1
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 1.1e-115 421.0 385 60.0
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.4e-115 420.6 348 63.2
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 1.9e-115 420.2 367 61.9
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 3.2e-115 419.5 347 64.0
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.5e-115 418.7 333 64.3
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 7.2e-115 418.3 403 57.3
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 9.4e-115 417.9 391 57.5
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 9.4e-115 417.9 344 63.4
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 3.6e-114 416.0 368 60.6
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.6e-114 416.0 366 60.4
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 3.7e-111 406.0 308 67.9
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.5e-109 400.6 387 57.1
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.6e-109 399.8 335 62.1
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.8e-108 396.0 343 62.4
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.9e-107 393.7 369 58.3
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 4.1e-102 375.9 296 66.6
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.2e-90 337.8 395 51.9
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 2.7e-90 336.7 444 47.5
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 1.3e-87 327.8 384 49.0
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.4e-86 324.3 241 68.9
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.0e-84 318.2 363 50.1
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 8.0e-82 308.5 229 69.4
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 6.8e-81 305.4 265 63.0
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 7.3e-75 285.4 204 70.6
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 6.8e-73 278.9 213 66.7
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 1.7e-68 264.2 210 67.6
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 5.2e-65 252.7 346 42.2
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 2.6e-64 250.4 361 41.6
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 6.4e-63 245.7 362 39.5
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 3.1e-57 226.9 223 58.7
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 6.8e-57 225.7 220 52.3
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.7e-55 219.9 343 39.7
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 9.3e-38 162.2 219 47.5
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 2.1e-26 124.4 101 66.3
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 4.8e-26 123.2 100 66.0
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 8.1e-26 122.5 249 34.1
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 6.5e-23 112.8 93 61.3
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 5.7e-19 99.8 101 51.5
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.4e-17 95.1 157 40.1
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 1.9e-14 84.7 347 26.2
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 5.5e-14 83.2 113 44.2
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 1.2e-13 82.0 343 24.8
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 4.3e-11 73.6 139 36.7


User provided reference genes

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