Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00360 Erythranthe guttata HOM05D008192 ORTHO05D010301 2.3e-73 278.9 148 100.0
MSTRG.11783 Avicennia marina HOM05D008192 ORTHO05D010301 2.3e-25 119.4 178 46.6
SGA_v2.0_scaffold147G36345 Striga asiatica HOM05D008192 ORTHO05D010301 6.8e-25 117.9 158 44.9
SalBow4G3126 Salvia bowleyana HOM05D008192 ORTHO05D010301 1.7e-23 113.2 152 50.7
COL.COLO4_18958 Corchorus olitorius HOM05D003327 ORTHO05D010301 7.3e-19 97.8 161 41.0
Dinv08187 Davidia involucrata HOM05D008192 ORTHO05D010301 7.3e-19 97.8 171 43.9
Duzib187G1399 Durio zibethinus HOM05D008192 ORTHO05D010301 7.3e-19 97.8 167 39.5
Cfa013043 Carpinus fangiana HOM05D008192 ORTHO05D010301 1.6e-18 96.7 172 43.0
Haze_21404 Corylus avellana HOM05D008192 ORTHO05D010301 2.3e-17 92.8 172 42.4
Duzib168G0610 Durio zibethinus HOM05D008192 ORTHO05D010301 2.3e-17 92.8 169 39.1
Actinidia10524 Actinidia chinensis HOM05D008192 ORTHO05D010301 6.8e-17 91.3 159 39.0
Hma1.2p1_0389F.1_g142520 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 6.8e-17 91.3 172 40.1
Oeu021912.1 Olea europaea HOM05D008192 ORTHO05D010301 8.9e-17 90.9 168 44.0
Hma1.2p1_1685F.1_g297470 Hydrangea macrophylla HOM05D008192 ORTHO05D010301 4.4e-16 88.6 172 39.5
FAN15G3555 Fragaria x ananassa HOM05D002088 ORTHO05D002204 1.3e-15 87.0 147 40.1
FvH4_2g41181 Fragaria vesca HOM05D008192 ORTHO05D010301 1.7e-15 86.7 151 39.1
FAN20G1545 Fragaria x ananassa HOM05D008192 ORTHO05D010301 6.4e-15 84.7 147 40.8
CSS0005628 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 8.3e-15 84.3 179 38.0
CSS0017566 Camellia sinensis var. sinensis HOM05D008192 ORTHO05D010301 8.3e-15 84.3 179 38.0
Prupe.1G394700 Prunus persica HOM05D008192 ORTHO05D010301 8.3e-15 84.3 144 41.7
Cc04_g10610 Coffea canephora HOM05D008192 ORTHO05D010301 1.1e-14 84.0 163 36.2
Thecc.09G015000 Theobroma cacao HOM05D008192 ORTHO05D010301 1.1e-14 84.0 168 38.7
Ciclev10009717m.g Citrus clementina HOM05D008192 ORTHO05D010301 4.1e-14 82.0 155 39.4
RcHm_v2.0_Chr6g0299341 Rosa chinensis HOM05D008192 ORTHO05D010301 4.1e-14 82.0 161 37.9
Gohir.A05G060200 Gossypium hirsutum HOM05D008192 ORTHO05D010301 7.1e-14 81.3 168 36.3
Gohir.A06G102100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 7.1e-14 81.3 156 40.4
Atru.chr7.2557 Acer truncatum HOM05D008192 ORTHO05D010301 2.1e-13 79.7 150 41.3
Oeu032512.1 Olea europaea HOM05D008192 ORTHO05D010301 2.1e-13 79.7 76 59.2
QL02p018787 Quercus lobata HOM05D008192 ORTHO05D010301 2.7e-13 79.3 168 35.7
Dinv13414 Davidia involucrata HOM05D008192 ORTHO05D010301 4.6e-13 78.6 73 58.9
EL10Ac2g02493 Beta vulgaris HOM05D008192 ORTHO05D010301 1.3e-12 77.0 154 35.7
Gorai.009G063500 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.7e-12 76.6 168 35.1
Actinidia22286 Actinidia chinensis HOM05D008192 ORTHO05D010301 3.0e-12 75.9 69 59.4
Sabra06G0207000 Salix brachista HOM05D008192 ORTHO05D010301 5.1e-12 75.1 160 36.2
Manes.03G008000 Manihot esculenta HOM05D008192 ORTHO05D010301 6.6e-12 74.7 122 39.3
Nitab4.5_0010499g0010 Nicotiana tabacum HOM05D008192 ORTHO05D010301 6.6e-12 74.7 153 36.6
AUR62032421 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.9e-11 73.2 153 35.9
CiPaw.07G230700 Carya illinoinensis HOM05D008192 ORTHO05D010301 2.5e-11 72.8 141 37.6
GSVIVG01035976001 Vitis vinifera HOM05D008192 ORTHO05D010301 2.5e-11 72.8 180 36.7
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 5.6e-11 71.6 196 32.1
Glyma.17G223700 Glycine max HOM05D008192 ORTHO05D010301 7.3e-11 71.2 147 37.4
Peaxi162Scf01286g00122 Petunia axillaris HOM05D008192 ORTHO05D010301 9.5e-11 70.9 132 37.1
Duzib150G1248 Durio zibethinus HOM05D008192 ORTHO05D010301 1.2e-10 70.5 167 33.5
Gorai.010G119200 Gossypium raimondii HOM05D008192 ORTHO05D010301 1.2e-10 70.5 146 39.7
AUR62024800 Chenopodium quinoa HOM05D008192 ORTHO05D010301 1.6e-10 70.1 154 35.1
Sed0007247 Sechium edule HOM05D008192 ORTHO05D010301 2.1e-10 69.7 76 48.7
Gohir.D06G104100 Gossypium hirsutum HOM05D008192 ORTHO05D010301 2.8e-10 69.3 146 39.7
Manes.16G130300 Manihot esculenta HOM05D008192 ORTHO05D010301 8.1e-10 67.8 121 42.1
VMungo0647G0321 Vigna mungo HOM05D008192 ORTHO05D010301 8.1e-10 67.8 148 34.5
MD08G1055700 Malus domestica HOM05D008192 ORTHO05D010301 1.1e-09 67.4 162 36.4
Nitab4.5_0000264g0200 Nicotiana tabacum HOM05D008192 ORTHO05D010301 1.1e-09 67.4 107 43.9
Sc09g0010700 Simmondsia chinensis HOM05D008192 ORTHO05D010301 1.4e-09 67.0 149 38.9
Gohir.D05G062401 Gossypium hirsutum HOM05D008192 ORTHO05D010301 1.8e-09 66.6 76 47.4
Solyc08g006760.4 Solanum lycopersicum HOM05D008192 ORTHO05D010301 1.8e-09 66.6 161 35.4
Ah.10g025590 Amaranthus hybridus HOM05D008192 ORTHO05D010301 2.4e-09 66.2 156 34.6
FAN27G3331 Fragaria x ananassa HOM05D002088 ORTHO05D002204 2.4e-09 66.2 111 35.1
Hund25618 Selenicereus undatus HOM05D008192 ORTHO05D010301 2.4e-09 66.2 88 43.2
Sopen08g002700 Solanum pennellii HOM05D008192 ORTHO05D010301 2.4e-09 66.2 161 34.8
Cpa.g.sc148.20 Carica papaya HOM05D008192 ORTHO05D010301 4.0e-09 65.5 75 48.0
arahy.Tifrunner.gnm1.ann1.D8U9UB Arachis hypogaea HOM05D008192 ORTHO05D010301 6.8e-09 64.7 140 32.1
DCAR_022864 Daucus carota HOM05D008192 ORTHO05D010301 8.9e-09 64.3 98 45.9
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 2.0e-08 63.2 189 33.9
MD15G1041800 Malus domestica HOM05D008192 ORTHO05D010301 2.6e-08 62.8 122 34.4
Potri.006G264900 Populus trichocarpa HOM05D008192 ORTHO05D010301 2.6e-08 62.8 80 45.0
Peaxi162Scf00045g02027 Petunia axillaris HOM05D008192 ORTHO05D010301 3.4e-08 62.4 102 43.1
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 4.4e-08 62.0 78 46.2
PGSC0003DMG400026278 Solanum tuberosum HOM05D008192 ORTHO05D010301 4.4e-08 62.0 77 46.8
Dinv41366 Davidia involucrata HOM05D003759 ORTHO05D004149 7.6e-08 61.2 88 43.2
arahy.Tifrunner.gnm1.ann1.XVGB1U Arachis hypogaea HOM05D008192 ORTHO05D010301 1.3e-07 60.5 181 30.4
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 1.7e-07 60.1 118 34.7
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 2.2e-07 59.7 74 44.6
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 2.2e-07 59.7 74 44.6
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 2.2e-07 59.7 82 42.7
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.2e-07 59.7 202 32.7
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 4.9e-07 58.5 101 37.6
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 6.4e-07 58.2 110 36.4
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.4e-07 58.2 83 39.8
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 8.4e-07 57.8 81 45.7
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 1.1e-06 57.4 140 31.4
CAN.G1198.1 Capsicum annuum HOM05D008192 ORTHO05D010301 1.4e-06 57.0 107 36.4
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.4e-06 57.0 61 49.2
CANSAT25G1276 Cannabis sativa HOM05D008192 ORTHO05D010301 4.2e-06 55.5 107 35.5
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 4.2e-06 55.5 124 32.3
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 4.2e-06 55.5 109 36.7
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 5.4e-06 55.1 101 38.6
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 5.4e-06 55.1 99 37.4
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 5.4e-06 55.1 101 37.6
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 5.4e-06 55.1 65 43.1
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 7.1e-06 54.7 101 36.6
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 7.1e-06 54.7 108 35.2
Sed0003883 Sechium edule HOM05D003759 ORTHO05D004149 7.1e-06 54.7 61 45.9
Actinidia01426 Actinidia chinensis HOM05D003759 ORTHO05D004149 9.2e-06 54.3 60 46.7
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 9.2e-06 54.3 54 51.9
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 9.2e-06 54.3 83 38.6
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 9.2e-06 54.3 132 31.1


User provided reference genes

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