Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g098880 Medicago truncatula HOM05D000773 ORTHO05D000588 1.3e-165 586.3 288 100.0
Medtr7g067580 Medicago truncatula HOM05D000773 ORTHO05D000588 2.0e-81 306.6 211 73.9
Medtr7g066970 Medicago truncatula HOM05D000773 ORTHO05D000588 1.6e-70 270.4 207 68.1
TPR.G1578 Trifolium pratense HOM05D000773 ORTHO05D000588 1.3e-51 207.6 285 48.1
TPR.G1589 Trifolium pratense HOM05D000773 ORTHO05D000588 2.7e-41 173.3 288 38.5
Ca_05717_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 1.9e-39 167.2 150 54.0
Ca_07609_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 1.9e-39 167.2 150 54.0
Medtr7g066880 Medicago truncatula HOM05D000773 ORTHO05D000588 2.1e-38 163.7 286 35.3
Ca_07611_v3 Cicer arietinum L. HOM05D000773 ORTHO05D000588 4.7e-38 162.5 150 54.7
Psat6g094440 Pisum sativum HOM05D000773 ORTHO05D000588 5.7e-36 155.6 278 36.3
Psat3g131360 Pisum sativum HOM05D000773 ORTHO05D000588 9.8e-36 154.8 286 37.1
Psat6g094480 Pisum sativum HOM05D000773 ORTHO05D000588 2.7e-33 146.7 292 35.6
Psat0s2251g0080 Pisum sativum HOM05D000773 ORTHO05D000588 3.5e-33 146.4 295 34.9
Medtr7g066890 Medicago truncatula HOM05D000773 ORTHO05D000588 1.0e-29 134.8 292 31.8
TPR.G1568 Trifolium pratense HOM05D000773 ORTHO05D000588 1.4e-26 124.4 277 33.9
Phvul.008G107600 Phaseolus vulgaris HOM05D000773 ORTHO05D000588 5.9e-25 119.0 160 41.2
Glyma.07G145600 Glycine max HOM05D000773 ORTHO05D000588 7.8e-25 118.6 154 41.6
Medtr7g066920 Medicago truncatula HOM05D000773 ORTHO05D000588 7.8e-25 118.6 82 61.0
Lj4g0001914 Lotus japonicus HOM05D000773 ORTHO05D000588 7.3e-23 112.1 193 38.9
Lj4g0007126 Lotus japonicus HOM05D000773 ORTHO05D000588 1.6e-22 110.9 277 31.4
TPR.G16860 Trifolium pratense HOM05D004465 ORTHO05D005450 6.2e-22 109.0 150 46.0
Lalb_Chr03g0042181 Lupinus albus HOM05D000773 ORTHO05D000588 2.3e-21 107.1 307 29.6
Lalb_Chr19g0125361 Lupinus albus HOM05D000773 ORTHO05D000588 3.7e-19 99.8 188 35.1
TPR.G1571 Trifolium pratense HOM05D000773 ORTHO05D000588 1.3e-16 91.3 73 56.2
VMungo1383G0179 Vigna mungo HOM05D000773 ORTHO05D000588 3.6e-14 83.2 110 39.1
arahy.Tifrunner.gnm1.ann1.AG8GG0 Arachis hypogaea HOM05D000773 ORTHO05D000588 9.8e-12 75.1 131 32.1
arahy.Tifrunner.gnm1.ann1.BYNY5R Arachis hypogaea HOM05D000773 ORTHO05D000588 2.4e-10 70.5 215 27.0
Atru.chr8.2200 Acer truncatum HOM05D000773 ORTHO05D000588 1.7e-08 64.3 87 39.1
Dinv37083 Davidia involucrata HOM05D000773 ORTHO05D000588 1.5e-07 61.2 194 24.2
Oeu040795.1 Olea europaea HOM05D000773 ORTHO05D000588 1.5e-07 61.2 206 27.2
Sc21g0006200 Simmondsia chinensis HOM05D000773 ORTHO05D000588 2.5e-07 60.5 65 38.5
Solyc09g014170.3 Solanum lycopersicum HOM05D000773 ORTHO05D000588 7.3e-07 58.9 115 31.3
Sopen09g007050 Solanum pennellii HOM05D000773 ORTHO05D000588 7.3e-07 58.9 116 31.0
CSS0017948 Camellia sinensis var. sinensis HOM05D000773 ORTHO05D000588 9.5e-07 58.5 114 34.2
CSS0026255 Camellia sinensis var. sinensis HOM05D000773 ORTHO05D000588 9.5e-07 58.5 114 34.2
Oeu040796.1 Olea europaea HOM05D000773 ORTHO05D000588 9.5e-07 58.5 98 29.6
TWI74G0022 Tripterygium wilfordii HOM05D000773 ORTHO05D000588 9.5e-07 58.5 44 54.5
Ciclev10011958m.g Citrus clementina HOM05D000773 ORTHO05D000588 1.6e-06 57.8 115 31.3
Cfa017254 Carpinus fangiana HOM05D000773 ORTHO05D000588 2.8e-06 57.0 299 23.4
SalBow5G1897 Salvia bowleyana HOM05D000773 ORTHO05D000588 2.8e-06 57.0 50 42.0
Carub.0006s0306 Capsella rubella HOM05D003944 ORTHO05D005521 3.6e-06 56.6 46 54.3
DCAR_018728 Daucus carota HOM05D000773 ORTHO05D000588 3.6e-06 56.6 150 28.0
MD12G1160300 Malus domestica HOM05D000773 ORTHO05D000588 3.6e-06 56.6 322 24.5
Lj2P1076T6 Lonicera japonica HOM05D000773 ORTHO05D000588 4.7e-06 56.2 47 53.2
Migut.J00223 Erythranthe guttata HOM05D000773 ORTHO05D000588 6.2e-06 55.8 62 33.9
Nn2g11371 Nelumbo nucifera HOM05D000773 ORTHO05D000588 6.2e-06 55.8 144 31.2
PGSC0003DMG400020320 Solanum tuberosum HOM05D000773 ORTHO05D000588 6.2e-06 55.8 115 30.4
Dinv35511 Davidia involucrata HOM05D000773 ORTHO05D000588 8.1e-06 55.5 50 50.0


User provided reference genes

Program Settings