Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g040975 Medicago truncatula HOM05D009226 ORTHO05D010767 5.6e-145 517.7 279 100.0
Medtr5g048720 Medicago truncatula HOM05D009226 ORTHO05D010767 3.4e-70 269.2 151 94.0
Medtr8g057120 Medicago truncatula HOM05D000107 ORTHO05D000062 6.3e-40 168.7 95 93.7
Medtr4g088560 Medicago truncatula HOM05D009226 ORTHO05D010767 4.3e-36 156.0 140 67.9
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.2e-34 149.1 153 56.9
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.5e-33 147.5 136 62.5
TPR.G33013 Trifolium pratense HOM05D009226 ORTHO05D010767 1.1e-31 141.4 128 60.2
TPR.G15912 Trifolium pratense HOM05D009226 ORTHO05D010767 1.2e-30 137.9 132 55.3
Ca_02603_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.8e-30 135.2 154 55.2
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.0e-29 134.8 142 57.0
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 2.9e-24 116.7 143 51.7
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 3.7e-24 116.3 143 51.0
Ca_14703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.4e-23 112.5 105 65.7
Psat0s1103g0040 Pisum sativum HOM05D009226 ORTHO05D010767 2.7e-22 110.2 106 60.4
Medtr4g014530 Medicago truncatula HOM05D009226 ORTHO05D010767 4.6e-22 109.4 69 92.8
Ca_14409_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 8.6e-21 105.1 107 62.6
Ca_25752_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.3e-20 102.1 100 64.0
Ca_13669_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.4e-18 97.8 104 60.6
Ca_19080_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.2e-18 95.9 99 55.6
Ca_02553_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.5e-17 92.0 91 61.5
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 7.5e-17 92.0 122 41.8
Ca_12564_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.9e-17 91.7 97 59.8
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 9.9e-17 91.7 184 37.5
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 6.4e-16 89.0 129 42.6
Ca_03865_v3 Cicer arietinum L. HOM05D002644 ORTHO05D010767 1.4e-15 87.8 108 55.6
Medtr5g004690 Medicago truncatula HOM05D009226 ORTHO05D267337 9.2e-15 85.1 73 65.8
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.2e-14 84.7 146 34.9
Psat0s2164g0040 Pisum sativum HOM05D000107 ORTHO05D010767 1.6e-14 84.3 86 59.3
Medtr0464s0010 Medicago truncatula HOM05D009226 ORTHO05D258110 1.7e-13 80.9 165 39.4
Ca_19703_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.9e-13 79.7 81 60.5
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 3.3e-12 76.6 129 39.5
Ca_26542_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.6e-12 75.9 74 66.2
Psat6g163120 Pisum sativum HOM05D009226 ORTHO05D010767 2.1e-11 73.9 109 46.8
Peaxi162Scf00603g00522 Petunia axillaris HOM05D002954 ORTHO05D003353 1.8e-10 70.9 86 43.0
Lj2g0001970 Lotus japonicus HOM05D003938 ORTHO05D004759 6.8e-10 68.9 122 33.6
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 6.8e-10 68.9 146 36.3
Ca_23003_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.0e-09 67.4 83 45.8
Ca_30084_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.0e-09 67.4 83 45.8
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 2.6e-09 67.0 133 34.6
Psat6g153520 Pisum sativum HOM05D009226 ORTHO05D010767 3.4e-09 66.6 70 57.1
Ca_05048_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 5.8e-09 65.9 66 60.6
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 5.8e-09 65.9 133 34.6
Ca_03135_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 9.9e-09 65.1 76 53.9
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.3e-08 64.7 114 38.6
Medtr4g013040 Medicago truncatula HOM05D000866 ORTHO05D000673 1.3e-08 64.7 48 68.8
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-08 64.7 111 36.0
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-08 64.7 111 36.0
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 2.9e-08 63.5 111 36.0
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 5.4e-07 59.3 127 29.9
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.2e-07 58.5 109 31.2
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 1.2e-06 58.2 84 35.7
Ca_20168_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.7e-06 57.0 62 59.7
TPR.G28307 Trifolium pratense HOM05D009226 ORTHO05D010767 2.7e-06 57.0 63 61.9
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 6.0e-06 55.8 128 28.1
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 7.8e-06 55.5 82 37.8


User provided reference genes

Program Settings