Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 2.2e-242 842.0 487 100.0
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 1.1e-188 663.7 494 76.1
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 6.0e-187 657.9 497 73.4
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 1.5e-185 653.3 550 66.0
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 4.4e-137 492.3 538 54.3
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 5.4e-127 458.8 486 57.2
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 4.5e-126 455.7 510 54.9
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 4.5e-126 455.7 496 57.3
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 1.3e-125 454.1 503 55.7
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 8.6e-101 371.7 529 45.9
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.7e-93 347.4 486 47.7
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 4.9e-80 302.8 239 70.7
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 3.4e-73 280.0 549 37.7
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 9.3e-71 271.9 623 35.6
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 4.6e-70 269.6 547 35.1
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 5.1e-69 266.2 417 42.0
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 8.7e-69 265.4 649 32.7
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 2.8e-67 260.4 317 49.2
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 3.7e-67 260.0 637 33.6
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 5.3e-66 256.1 618 34.5
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 5.3e-66 256.1 584 34.6
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 1.2e-65 255.0 669 32.6
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 1.5e-65 254.6 490 36.9
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 4.5e-65 253.1 550 37.3
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.3e-64 251.5 457 38.1
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.7e-64 251.1 311 49.2
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.7e-64 251.1 311 49.2
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 2.9e-64 250.4 584 35.4
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.9e-64 249.6 656 32.3
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 4.9e-64 249.6 528 36.6
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.4e-63 248.1 669 32.7
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.4e-63 248.1 656 32.8
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 1.4e-63 248.1 656 32.8
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 1.4e-63 248.1 312 47.1
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.9e-63 247.7 635 32.4
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 4.2e-63 246.5 645 33.6
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 5.5e-63 246.1 448 38.2
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.2e-62 245.0 448 37.9
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 1.2e-62 245.0 310 46.8
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 4.6e-62 243.0 450 37.8
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 4.6e-62 243.0 622 34.1
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.6e-62 243.0 655 32.2
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.0e-61 241.9 656 32.5
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 1.0e-61 241.9 439 39.2
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 2.1e-59 234.2 423 37.1
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 4.8e-59 233.0 658 32.1
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 4.0e-58 229.9 464 37.1
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 9.0e-58 228.8 320 46.9
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 9.0e-58 228.8 650 32.2
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 1.2e-57 228.4 665 30.8
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 2.0e-57 227.6 438 38.8
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 3.4e-57 226.9 308 44.8
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 3.4e-57 226.9 445 37.1
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 4.5e-57 226.5 312 43.9
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 5.8e-57 226.1 618 30.4
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 5.8e-57 226.1 426 38.5
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 1.0e-56 225.3 642 32.4
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.7e-56 224.6 318 45.3
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 1.1e-55 221.9 518 33.4
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 5.5e-55 219.5 628 32.3
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 7.1e-55 219.2 604 32.0
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 1.0e-53 215.3 430 36.5
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 1.0e-53 215.3 312 43.6
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 1.3e-53 214.9 595 31.4
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 2.3e-53 214.2 306 42.8
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 2.3e-53 214.2 631 31.2
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 2.3e-53 214.2 654 31.0
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 3.0e-53 213.8 412 38.3
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 5.1e-53 213.0 624 28.8
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 5.1e-53 213.0 414 38.2
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 1.9e-52 211.1 410 36.6
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 2.5e-52 210.7 462 33.8
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.3e-51 208.4 596 31.2
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.2e-51 207.6 594 31.1
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 2.2e-51 207.6 433 36.7
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 2.8e-51 207.2 618 29.4
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 3.7e-51 206.8 532 33.8
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 4.8e-51 206.5 685 28.6
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 8.2e-51 205.7 432 36.6
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 8.2e-51 205.7 318 41.2
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 3.1e-50 203.8 636 30.0
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 5.3e-50 203.0 219 52.1
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 6.9e-50 202.6 591 31.3
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 4.5e-49 199.9 544 31.1
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 7.6e-49 199.1 426 35.7
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 1.7e-48 198.0 249 45.8
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 3.8e-48 196.8 404 37.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 5.0e-48 196.4 616 29.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 1.1e-47 195.3 606 31.7
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 1.4e-47 194.9 638 29.5
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 7.2e-47 192.6 608 29.9
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 7.2e-47 192.6 608 29.9
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 1.8e-45 188.0 605 28.9
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 1.8e-45 188.0 605 28.9
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 1.8e-45 188.0 605 28.9
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 6.7e-45 186.0 570 30.5
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 2.5e-44 184.1 183 51.9
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 2.5e-44 184.1 680 28.8
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 5.7e-44 183.0 414 34.5
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 7.7e-41 172.6 596 29.2
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.8e-37 161.4 632 28.2
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 1.5e-36 158.3 173 49.7
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 4.8e-35 153.3 109 64.2
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 2.0e-33 147.9 108 63.9
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 8.5e-32 142.5 318 35.2
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 7.4e-28 129.4 445 29.7
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 7.0e-26 122.9 339 33.3
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 3.2e-23 114.0 192 37.5
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 4.7e-22 110.2 101 53.5
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.0e-21 109.0 81 61.7
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.8e-21 108.2 641 24.6
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.2e-17 95.5 113 46.0
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 4.4e-12 77.0 148 41.9
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 4.8e-11 73.6 126 42.1
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 9.1e-10 69.3 132 37.1
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.3e-08 65.5 83 37.3
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.8e-08 63.9 289 27.3
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 4.2e-07 60.5 139 39.6
QL04p005302 Quercus lobata HOM05D006280 ORTHO05D007876 5.5e-07 60.1 182 31.3
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 1.2e-06 58.9 109 37.6


User provided reference genes

Program Settings