Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g106970 Medicago truncatula HOM05D002457 ORTHO05D008732 8.7e-51 203.4 105 100.0
TPR.G34450 Trifolium pratense HOM05D002457 ORTHO05D008732 2.4e-32 142.1 96 81.2
Psat3g026960 Pisum sativum HOM05D002457 ORTHO05D008732 1.3e-30 136.3 96 75.0
arahy.Tifrunner.gnm1.ann1.3292NE Arachis hypogaea HOM05D002457 ORTHO05D008732 5.0e-30 134.4 96 72.9
Ciclev10011486m.g Citrus clementina HOM05D002457 ORTHO05D008732 6.5e-30 134.0 80 78.8
Glyma.19G202600 Glycine max HOM05D002457 ORTHO05D008732 6.5e-30 134.0 96 72.9
arahy.Tifrunner.gnm1.ann1.V1YZ1K Arachis hypogaea HOM05D002457 ORTHO05D008732 1.1e-29 133.3 96 71.9
Phvul.001G198700 Phaseolus vulgaris HOM05D002457 ORTHO05D008732 1.1e-29 133.3 96 71.9
Lj1g0003374 Lotus japonicus HOM05D002457 ORTHO05D008732 1.9e-29 132.5 96 71.9
VMungo0331G0446 Vigna mungo HOM05D002457 ORTHO05D008732 4.2e-29 131.3 96 74.0
Atru.chr8.1279 Acer truncatum HOM05D002457 ORTHO05D008732 5.5e-29 131.0 96 69.8
MELO3C009577.2 Cucumis melo HOM05D002457 ORTHO05D008732 2.1e-28 129.0 96 69.8
Prupe.7G089800 Prunus persica HOM05D002457 ORTHO05D008732 3.6e-28 128.3 80 77.5
Lalb_Chr25g0287831 Lupinus albus HOM05D002457 ORTHO05D008732 8.0e-28 127.1 96 68.8
CSS0042077 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D008732 1.0e-27 126.7 80 77.5
CsaV3_3G038350 Cucumis sativus L. HOM05D002457 ORTHO05D008732 1.0e-27 126.7 96 68.8
MD12G1046300 Malus domestica HOM05D002457 ORTHO05D008732 1.0e-27 126.7 96 68.8
Duzib106G1729 Durio zibethinus HOM05D002457 ORTHO05D008732 1.4e-27 126.3 96 66.7
Peaxi162Scf00203g00029 Petunia axillaris HOM05D002457 ORTHO05D008732 1.8e-27 125.9 80 77.5
Hma1.2p1_0127F.1_g059733 Hydrangea macrophylla HOM05D002457 ORTHO05D008732 2.3e-27 125.6 79 75.9
Potri.016G065400 Populus trichocarpa HOM05D002457 ORTHO05D008732 3.0e-27 125.2 96 65.6
QL07p026269 Quercus lobata HOM05D002457 ORTHO05D008732 3.0e-27 125.2 95 69.5
Thecc.05G183800 Theobroma cacao HOM05D002457 ORTHO05D008732 3.0e-27 125.2 96 68.8
Cpa.g.sc222.11 Carica papaya HOM05D002457 ORTHO05D008732 4.0e-27 124.8 80 75.0
Nitab4.5_0000721g0010 Nicotiana tabacum HOM05D002457 ORTHO05D008732 4.0e-27 124.8 80 76.2
ClCG10G017940 Citrullus lanatus HOM05D002457 ORTHO05D008732 5.2e-27 124.4 96 66.7
Duzib128G0929 Durio zibethinus HOM05D002457 ORTHO05D008732 5.2e-27 124.4 96 66.7
Migut.L01840 Erythranthe guttata HOM05D002457 ORTHO05D008732 5.2e-27 124.4 80 75.0
Sed0004577 Sechium edule HOM05D002457 ORTHO05D008732 5.2e-27 124.4 96 66.7
COL.COLO4_29483 Corchorus olitorius HOM05D002457 ORTHO05D008732 6.7e-27 124.0 96 65.6
Dinv11900 Davidia involucrata HOM05D002457 ORTHO05D008732 6.7e-27 124.0 80 75.0
TAR369G1073 Trochodendron aralioides HOM05D002457 ORTHO05D008732 6.7e-27 124.0 96 66.7
MSTRG.26594 Avicennia marina HOM05D002457 ORTHO05D008732 8.8e-27 123.6 80 73.8
CSS0024523 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D008732 8.8e-27 123.6 80 76.2
CAN.G128.166 Capsicum annuum HOM05D002457 ORTHO05D008732 1.1e-26 123.2 80 77.5
ECA233G1363 Erigeron canadensis HOM05D002457 ORTHO05D008732 1.1e-26 123.2 80 75.0
Sabra16G0066900 Salix brachista HOM05D002457 ORTHO05D008732 1.5e-26 122.9 96 64.6
SGA_v2.0_scaffold184G40036 Striga asiatica HOM05D002457 ORTHO05D008732 1.5e-26 122.9 80 73.8
Nitab4.5_0012842g0010 Nicotiana tabacum HOM05D002457 ORTHO05D008732 2.6e-26 122.1 80 75.0
RcHm_v2.0_Chr3g0477431 Rosa chinensis HOM05D002457 ORTHO05D008732 4.4e-26 121.3 79 74.7
CiPaw.11G082000 Carya illinoinensis HOM05D002457 ORTHO05D008732 5.7e-26 120.9 96 64.6
DCAR_020678 Daucus carota HOM05D002457 ORTHO05D008732 5.7e-26 120.9 80 73.8
Solyc10g081630.2 Solanum lycopersicum HOM05D002457 ORTHO05D008732 5.7e-26 120.9 80 75.0
Sopen10g032140 Solanum pennellii HOM05D002457 ORTHO05D008732 5.7e-26 120.9 80 75.0
PGSC0003DMG400028132 Solanum tuberosum HOM05D002457 ORTHO05D008732 5.7e-26 120.9 80 73.8
Eucgr.A02541 Eucalyptus grandis HOM05D002457 ORTHO05D008732 9.7e-26 120.2 96 65.6
FvH4_6g21050 Fragaria vesca HOM05D002457 ORTHO05D008732 1.7e-25 119.4 79 73.4
FAN14G2045 Fragaria x ananassa HOM05D002457 ORTHO05D008732 1.7e-25 119.4 79 73.4
MBI05_g40563_MAGBIO Magnolia biondii HOM05D002457 ORTHO05D008732 2.8e-25 118.6 80 70.0
Cc06_g06990 Coffea canephora HOM05D002457 ORTHO05D008732 3.7e-25 118.2 80 68.8
GSVIVG01022515001 Vitis vinifera HOM05D002457 ORTHO05D008732 3.7e-25 118.2 80 70.0
FAN05G0800 Fragaria x ananassa HOM05D002457 ORTHO05D008732 4.8e-25 117.9 79 73.4
FAN05G1163 Fragaria x ananassa HOM05D002457 ORTHO05D008732 4.8e-25 117.9 79 73.4
TWI74G1304 Tripterygium wilfordii HOM05D002457 ORTHO05D008732 6.3e-25 117.5 97 62.9
CANSAT64G0706 Cannabis sativa HOM05D002457 ORTHO05D008732 1.8e-24 115.9 79 68.4
FAN02G0971 Fragaria x ananassa HOM05D002457 ORTHO05D008732 1.8e-24 115.9 79 70.9
Rhsim05G0230700 Rhododendron simsii HOM05D002457 ORTHO05D008732 1.8e-24 115.9 80 70.0
HanXRQChr13g0398791 Helianthus annuus HOM05D002457 ORTHO05D008732 3.1e-24 115.2 80 70.0
Aa31sc167G30 Aethionema arabicum HOM05D002457 ORTHO05D008732 9.1e-24 113.6 97 60.8
Lsat_1_v5_gn_2_121640 Lactuca sativa HOM05D002457 ORTHO05D008732 9.1e-24 113.6 80 68.8
PGR004G0672 Punica granatum HOM05D002457 ORTHO05D008732 9.1e-24 113.6 96 60.4
THA.LOC104799263 Tarenaya hassleriana HOM05D002457 ORTHO05D008732 1.6e-23 112.8 96 59.4
unitig_8.g4735 Utricularia gibba HOM05D002457 ORTHO05D008732 3.5e-23 111.7 80 68.8
HPP92_011039 Vanilla planifolia HOM05D002457 ORTHO05D008732 4.5e-23 111.3 79 67.1
Lj1C1061G4 Lonicera japonica HOM05D002457 ORTHO05D008732 7.7e-23 110.5 81 65.4
Sc07g0006360 Simmondsia chinensis HOM05D002457 ORTHO05D008732 1.0e-22 110.2 96 58.3
Thhalv10013290m.g Eutrema salsugineum HOM05D002457 ORTHO05D008732 1.3e-22 109.8 97 58.8
PSO384G3383 Papaver somniferum HOM05D002457 ORTHO05D008732 1.7e-22 109.4 79 67.1
Sp6g36310 Schrenkiella parvula HOM05D002457 ORTHO05D008732 1.7e-22 109.4 97 58.8
PSO339G5312 Papaver somniferum HOM05D002457 ORTHO05D008732 2.9e-22 108.6 79 67.1
Gorai.009G395600 Gossypium raimondii HOM05D002457 ORTHO05D008732 3.8e-22 108.2 80 67.5
BcaNung06692 Brassica carinata HOM05D002457 ORTHO05D008732 6.5e-22 107.5 97 57.7
A10p29850 Brassica napus HOM05D002457 ORTHO05D008732 6.5e-22 107.5 97 57.7
C09p70220 Brassica napus HOM05D002457 ORTHO05D008732 6.5e-22 107.5 97 57.7
BraA10t45023Z Brassica rapa HOM05D002457 ORTHO05D008732 6.5e-22 107.5 97 57.7
Gohir.D04G093400 Gossypium hirsutum HOM05D002457 ORTHO05D008732 8.5e-22 107.1 80 67.5
Aqoxy1G00581 Aquilegia oxysepala HOM05D002457 ORTHO05D008732 1.5e-21 106.3 79 65.8
Ah.02g116080 Amaranthus hybridus HOM05D002457 ORTHO05D008732 2.5e-21 105.5 94 59.6
BcaC06g32561 Brassica carinata HOM05D002457 ORTHO05D008732 2.5e-21 105.5 97 56.7
BolC9t59766H Brassica oleracea HOM05D002457 ORTHO05D008732 2.5e-21 105.5 97 55.7
AUR62038417 Chenopodium quinoa HOM05D002457 ORTHO05D008732 3.2e-21 105.1 95 57.9
AUR62044676 Chenopodium quinoa HOM05D002457 ORTHO05D008732 3.2e-21 105.1 95 57.9
EL10Ac5g11804 Beta vulgaris HOM05D002457 ORTHO05D008732 5.5e-21 104.4 96 58.3
AUR62036308 Chenopodium quinoa HOM05D002457 ORTHO05D008732 9.4e-21 103.6 95 57.9
ATR0697G006 Amborella trichopoda HOM05D002457 ORTHO05D008732 1.6e-20 102.8 96 54.2
Gohir.A04G056100 Gossypium hirsutum HOM05D002457 ORTHO05D008732 6.1e-20 100.9 80 65.0
Os11g0572800 Oryza sativa ssp. japonica HOM05D002457 ORTHO05D008732 1.8e-19 99.4 97 53.6
CDE07G0411 Ceratophyllum demersum HOM05D002457 ORTHO05D008732 3.0e-19 98.6 81 59.3
Ca_09083_v3 Cicer arietinum L. HOM05D002457 ORTHO05D008732 4.0e-19 98.2 71 74.6
CARHR206650 Cardamine hirsuta HOM05D002457 ORTHO05D008732 1.2e-18 96.7 98 58.2
AagrBONN_evm.TU.Sc2ySwM_368.1680 Anthoceros agrestis HOM05D002457 ORTHO05D008732 2.6e-18 95.5 81 59.3
Zm00001eb200180 Zea mays HOM05D002457 ORTHO05D008732 3.4e-18 95.1 97 52.6
AL6G16640 Arabidopsis lyrata HOM05D002457 ORTHO05D008732 4.4e-18 94.7 80 61.2
Carub.0006s0543 Capsella rubella HOM05D002457 ORTHO05D008732 4.4e-18 94.7 97 54.6
AT5G06550 Arabidopsis thaliana HOM05D002457 ORTHO05D008732 1.7e-17 92.8 80 60.0
ATR0361G001 Amborella trichopoda HOM05D002457 ORTHO05D008732 1.1e-16 90.1 71 57.7
Pp3c23_15970 Physcomitrium patens HOM05D002457 ORTHO05D008732 1.2e-15 86.7 81 49.4
CAN.G128.168 Capsicum annuum HOM05D002457 ORTHO05D008732 2.2e-14 82.4 54 68.5
Haze_20131 Corylus avellana HOM05D002457 ORTHO05D008732 2.2e-14 82.4 63 65.1
Mapoly0061s0019 Marchantia polymorpha HOM05D002457 ORTHO05D008732 2.2e-14 82.4 82 50.0
CBR_g29587 Chara braunii HOM05D002457 ORTHO05D008732 3.6e-12 75.1 83 48.2
SMO361G0478 Selaginella moellendorffii HOM05D002457 ORTHO05D008732 4.7e-12 74.7 78 48.7


User provided reference genes

Program Settings