Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.7e-210 736.1 475 100.0
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 4.2e-92 342.8 272 70.6
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 8.7e-90 335.1 409 51.8
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 2.1e-88 330.5 268 69.4
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 1.2e-86 324.7 400 55.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 1.0e-85 321.6 255 71.4
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 2.3e-82 310.5 289 65.4
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 1.1e-79 301.6 271 63.1
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 9.0e-79 298.5 272 62.5
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.9e-77 293.5 275 62.9
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 2.1e-75 287.3 272 61.0
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 1.3e-74 284.6 274 61.7
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 7.4e-73 278.9 269 60.6
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 2.7e-67 260.4 263 58.9
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 2.3e-66 257.3 275 54.9
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.5e-65 254.6 275 54.2
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 2.0e-62 244.2 317 48.9
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.0e-61 241.9 273 50.9
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 2.9e-61 240.4 258 53.5
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 8.5e-61 238.8 268 53.0
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.1e-60 238.4 260 50.0
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.5e-60 237.3 274 52.6
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.2e-59 235.0 260 50.0
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 2.1e-59 234.2 272 52.6
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 8.0e-59 232.3 334 46.7
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 6.7e-58 229.2 291 49.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 8.8e-58 228.8 267 50.9
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.5e-57 228.0 285 51.2
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.5e-57 228.0 267 49.8
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 3.3e-57 226.9 272 50.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.4e-57 226.5 270 46.7
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 4.4e-57 226.5 269 48.7
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.3e-56 224.9 257 50.2
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.3e-56 224.9 347 41.5
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.7e-56 224.6 272 48.5
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.8e-56 223.8 257 50.2
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 4.8e-56 223.0 271 47.6
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 8.2e-56 222.2 271 50.9
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 1.8e-55 221.1 278 48.6
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 2.4e-55 220.7 277 51.3
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 2.4e-55 220.7 263 47.9
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 5.3e-55 219.5 282 49.6
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 5.3e-55 219.5 271 48.0
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.2e-54 218.4 279 47.0
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.6e-54 217.2 282 50.0
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.0e-53 215.3 260 50.8
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 1.3e-53 214.9 269 45.4
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.3e-53 214.9 258 50.8
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 2.2e-53 214.2 271 49.1
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 2.2e-53 214.2 266 48.1
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 2.9e-53 213.8 274 47.4
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.9e-53 213.8 286 45.8
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 5.0e-53 213.0 265 49.4
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 1.1e-52 211.8 269 47.2
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 2.5e-52 210.7 263 48.3
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 2.5e-52 210.7 277 46.9
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 3.2e-52 210.3 275 48.7
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 3.2e-52 210.3 272 50.0
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 4.2e-52 209.9 278 48.9
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 4.2e-52 209.9 291 45.0
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 4.2e-52 209.9 268 48.1
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 7.2e-52 209.1 277 46.2
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.6e-51 208.0 282 47.5
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 3.6e-51 206.8 276 47.8
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.0e-51 205.7 291 45.0
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 1.4e-50 204.9 262 47.7
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.8e-50 204.5 277 48.7
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.2e-50 203.0 276 48.2
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 6.7e-50 202.6 274 48.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 6.7e-50 202.6 283 43.8
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.5e-49 201.4 250 50.0
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 2.0e-49 201.1 274 44.2
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 2.6e-49 200.7 270 45.9
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 2.6e-49 200.7 278 43.9
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.3e-49 200.3 280 45.0
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 2.2e-48 197.6 260 46.9
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 4.8e-48 196.4 266 45.5
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.1e-47 195.3 276 44.2
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 1.4e-47 194.9 263 46.4
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 3.1e-47 193.7 269 44.2
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 5.3e-47 193.0 284 40.5
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 5.3e-47 193.0 258 46.5
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 7.0e-47 192.6 257 45.1
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 9.1e-47 192.2 258 46.5
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.2e-46 191.8 271 45.4
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 1.6e-46 191.4 264 46.2
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 1.0e-45 188.7 256 48.0
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 5.0e-45 186.4 236 48.7
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.9e-44 184.5 201 51.2
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 9.4e-44 182.2 321 39.3
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 8.0e-43 179.1 480 32.5
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 6.8e-42 176.0 245 44.5
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 8.8e-42 175.6 268 41.0
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 2.6e-41 174.1 262 45.0
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 5.7e-41 172.9 276 40.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 3.7e-40 170.2 273 42.5
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 4.8e-40 169.9 261 41.4
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 6.3e-40 169.5 259 42.5
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 8.3e-40 169.1 326 37.7
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.1e-36 158.7 284 38.0
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.2e-35 155.2 318 35.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 5.2e-34 149.8 285 37.2
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 1.3e-32 145.2 266 38.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 8.3e-32 142.5 253 34.8
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 5.4e-31 139.8 188 47.3
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 7.0e-31 139.4 263 38.4
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 2.0e-30 137.9 142 54.2
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 1.7e-29 134.8 207 39.1
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 9.5e-28 129.0 162 44.4
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 7.5e-25 119.4 204 40.7
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.4e-23 115.2 247 33.6
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 2.8e-19 100.9 280 31.4
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.6e-17 94.4 167 35.9
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 4.4e-17 93.6 281 29.2
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 5.8e-17 93.2 92 55.4
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.9e-16 90.9 76 59.2
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.7e-14 84.3 174 33.3
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 3.9e-13 80.5 272 29.8
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 5.6e-12 76.6 79 54.4
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 6.0e-06 56.6 194 32.0


User provided reference genes

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