Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g080310 Medicago truncatula HOM05D001200 ORTHO05D002731 6.7e-63 243.8 121 100.0
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.5e-35 151.8 132 62.9
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 5.9e-35 151.0 132 62.9
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 6.1e-32 141.0 132 58.3
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 7.0e-28 127.5 137 51.1
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 9.2e-28 127.1 138 50.7
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 9.2e-28 127.1 138 50.7
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 9.2e-28 127.1 138 50.7
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 9.2e-28 127.1 138 50.7
HanXRQChr08g0211961 Helianthus annuus HOM05D001200 ORTHO05D002731 7.3e-25 117.5 104 58.7
HanXRQChr03g0073101 Helianthus annuus HOM05D001200 ORTHO05D002731 1.8e-23 112.8 129 51.2
arahy.Tifrunner.gnm1.ann1.USFH3V Arachis hypogaea HOM05D001200 ORTHO05D009713 4.9e-21 104.8 113 49.6
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 7.0e-20 100.9 58 87.9
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 2.7e-19 99.0 63 73.0
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.3e-18 96.7 109 50.5
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-18 96.3 70 67.1
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 6.6e-18 94.4 98 53.1
CsaV3_6G032290 Cucumis sativus L. HOM05D001200 ORTHO05D002731 4.3e-17 91.7 65 66.2
Lalb_Chr13g0292821 Lupinus albus HOM05D001200 ORTHO05D002731 9.5e-17 90.5 56 80.4
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.1e-16 89.4 63 65.1
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.8e-16 89.0 99 49.5
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.8e-16 89.0 99 49.5
Hund28851 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.8e-16 89.0 99 49.5
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.8e-16 89.0 99 49.5
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 2.8e-16 89.0 99 49.5
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.1e-15 87.0 62 67.7
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.5e-14 83.2 65 60.0
SalBow2G1265 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.5e-14 83.2 65 60.0
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 4.4e-14 81.6 57 64.9
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 5.8e-14 81.3 56 71.4
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 5.8e-14 81.3 56 71.4
RcHm_v2.0_CPg0502791 Rosa chinensis HOM05D001200 ORTHO05D002731 5.8e-14 81.3 56 71.4
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 7.5e-14 80.9 63 60.3
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 6.4e-13 77.8 55 67.3
CAN.G127.8 Capsicum annuum HOM05D001200 ORTHO05D002731 1.4e-12 76.6 55 67.3
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.4e-12 76.6 55 65.5
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 7.1e-12 74.3 56 67.9
BolC2t10594H Brassica oleracea HOM05D001200 ORTHO05D002731 9.2e-12 73.9 56 62.5
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 9.2e-12 73.9 56 62.5
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 9.2e-12 73.9 56 62.5
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 9.2e-12 73.9 56 62.5
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 9.2e-12 73.9 56 62.5
Lalb_Chr19g0127741 Lupinus albus HOM05D001200 ORTHO05D002731 3.9e-10 68.6 62 61.3
Nn031s41613 Nelumbo nucifera HOM05D001200 ORTHO05D002731 4.3e-09 65.1 39 71.8
MBI10_g47590_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 4.0e-07 58.5 39 71.8
MBI10_g47593_MAGBIO Magnolia biondii HOM05D001200 ORTHO05D002731 4.0e-07 58.5 39 71.8
Migut.D01254 Erythranthe guttata HOM05D001200 ORTHO05D002731 6.8e-07 57.8 38 71.1
GSVIVG01023756001 Vitis vinifera HOM05D001200 ORTHO05D002731 2.0e-06 56.2 38 63.2
C04p22670 Brassica napus HOM05D001200 ORTHO05D009713 3.4e-06 55.5 30 80.0
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 3.4e-06 55.5 110 35.5
HanXRQChr13g0388461 Helianthus annuus HOM05D001200 ORTHO05D009713 5.8e-06 54.7 37 62.2
ATCG01060 Arabidopsis thaliana HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 9.9e-06 53.9 30 76.7
C09p40340 Brassica napus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC29t60505H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC29t60545H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC35t60693H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC35t60703H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC37t60792H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC44t60821H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC45t60910H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC46t60959H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BolSC49t61142H Brassica oleracea HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BraSC103t45428Z Brassica rapa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BraSC143t45661Z Brassica rapa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BraSC179t45775Z Brassica rapa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BraSC25t45909Z Brassica rapa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
BraSC59t46550Z Brassica rapa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
CAN.G1526.3 Capsicum annuum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
CAN.G1526.8 Capsicum annuum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
CAN.G278.4 Capsicum annuum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
CAN.G965.7 Capsicum annuum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
CARHR282430 Cardamine hirsuta HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
DCAR_032537 Daucus carota HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Migut.D01253 Erythranthe guttata HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Gohir.1Z049631 Gossypium hirsutum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Gohir.A02G134400 Gossypium hirsutum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Gohir.A09G017925 Gossypium hirsutum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 73.3
Gohir.A09G046200 Gossypium hirsutum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Gorai.009G377500 Gossypium raimondii HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
HanXRQChr00c0336g0573651 Helianthus annuus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
HanXRQChr00c0504g0575301 Helianthus annuus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
HanXRQChr09g0244731 Helianthus annuus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
HanXRQChr09g0246671 Helianthus annuus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
HanXRQChr17g0569731 Helianthus annuus HOM05D001200 ORTHO05D009778 9.9e-06 53.9 30 76.7
Hma1.2p1_0382F.1_g140210 Hydrangea macrophylla HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 9.9e-06 53.9 30 76.7
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Nn064s42211 Nelumbo nucifera HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Nn3g20217 Nelumbo nucifera HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
PSO548G0036 Papaver somniferum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
PGR111G0008 Punica granatum HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
RcHm_v2.0_Chr5g0017221 Rosa chinensis HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
RcHm_v2.0_Chr5g0043041 Rosa chinensis HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
RcHm_v2.0_CPg0502781 Rosa chinensis HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
SabraPtG0005600 Salix brachista HOM05D000533 ORTHO05D006151 9.9e-06 53.9 30 76.7
Hund27630 Selenicereus undatus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Hund28597 Selenicereus undatus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 9.9e-06 53.9 30 76.7


User provided reference genes

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