Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr6g007060 Medicago truncatula HOM05D001104 ORTHO05D006624 7.2e-31 136.7 75 100.0
Medtr6g007040 Medicago truncatula HOM05D001104 ORTHO05D006624 2.2e-11 72.0 42 71.4
TPR.G2265 Trifolium pratense HOM05D001104 ORTHO05D006624 4.8e-11 70.9 42 69.0
Ca_04192_v3 Cicer arietinum L. HOM05D001104 ORTHO05D006624 6.3e-11 70.5 42 69.0
MSTRG.15512 Avicennia marina HOM05D001104 ORTHO05D006624 7.2e-07 57.0 42 54.8
CSS0012459 Camellia sinensis var. sinensis HOM05D001104 ORTHO05D006624 1.2e-06 56.2 42 52.4
Nn4g22776 Nelumbo nucifera HOM05D001104 ORTHO05D006624 1.2e-06 56.2 42 54.8
QL02p076349 Quercus lobata HOM05D001104 ORTHO05D006624 1.2e-06 56.2 42 52.4
TAR374G1405 Trochodendron aralioides HOM05D001104 ORTHO05D006624 1.2e-06 56.2 42 52.4
Oeu062922.1 Olea europaea HOM05D001104 ORTHO05D006624 1.6e-06 55.8 42 52.4
SGA_v2.0_scaffold135G34875 Striga asiatica HOM05D001104 ORTHO05D006624 1.6e-06 55.8 42 54.8
Dinv33487 Davidia involucrata HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
Dinv35069 Davidia involucrata HOM05D001104 ORTHO05D006624 2.1e-06 55.5 40 55.0
Hma1.2p1_0993F.1_g245480 Hydrangea macrophylla HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
Lj7C592G4 Lonicera japonica HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
MD17G1034200 Malus domestica HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
Prupe.3G285400 Prunus persica HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
Rhsim08G0054100 Rhododendron simsii HOM05D001104 ORTHO05D006285 2.1e-06 55.5 42 52.4
Rhsim10G0021500 Rhododendron simsii HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
SalBow1G5303 Salvia bowleyana HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
vmacro05831 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
vmacro18250 Vaccinium macrocarpon HOM05D001104 ORTHO05D006624 2.1e-06 55.5 42 52.4
CAN.G973.9 Capsicum annuum HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
MD09G1032600 Malus domestica HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
Nitab4.5_0001125g0070 Nicotiana tabacum HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
Nitab4.5_0001709g0040 Nicotiana tabacum HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
Solyc02g067740.4 Solanum lycopersicum HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
Sopen02g016860 Solanum pennellii HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
PGSC0003DMG400006955 Solanum tuberosum HOM05D001104 ORTHO05D006624 2.7e-06 55.1 42 52.4
Actinidia35743 Actinidia chinensis HOM05D001104 ORTHO05D006624 3.6e-06 54.7 42 52.4
Aqoxy3G01030 Aquilegia oxysepala HOM05D001104 ORTHO05D006624 3.6e-06 54.7 42 52.4
Cc07_g02180 Coffea canephora HOM05D001104 ORTHO05D006624 3.6e-06 54.7 42 52.4
Potri.001G348700 Populus trichocarpa HOM05D001104 ORTHO05D006624 3.6e-06 54.7 42 52.4
TWI12G0063 Tripterygium wilfordii HOM05D001104 ORTHO05D006624 3.6e-06 54.7 42 52.4
Cfa007422 Carpinus fangiana HOM05D001104 ORTHO05D006624 4.7e-06 54.3 42 50.0
CiPaw.03G038600 Carya illinoinensis HOM05D001104 ORTHO05D006624 4.7e-06 54.3 42 50.0
Migut.H00115 Erythranthe guttata HOM05D001104 ORTHO05D006624 4.7e-06 54.3 42 50.0
unitig_899.g15491 Utricularia gibba HOM05D000928 ORTHO05D001186 4.7e-06 54.3 50 48.0
GSVIVG01032469001 Vitis vinifera HOM05D001104 ORTHO05D006624 4.7e-06 54.3 42 50.0
arahy.Tifrunner.gnm1.ann1.PA6DSG Arachis hypogaea HOM05D001104 ORTHO05D006624 6.1e-06 53.9 42 50.0
arahy.Tifrunner.gnm1.ann1.S5BZSG Arachis hypogaea HOM05D001104 ORTHO05D006624 6.1e-06 53.9 42 50.0
Cpa.g.sc215.8 Carica papaya HOM05D001104 ORTHO05D006624 8.0e-06 53.5 42 50.0
Haze_14675 Corylus avellana HOM05D001104 ORTHO05D006624 8.0e-06 53.5 42 50.0
THA.LOC104825337 Tarenaya hassleriana HOM05D001104 ORTHO05D006624 8.0e-06 53.5 42 45.2


User provided reference genes

Program Settings