Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 9.3e-99 363.6 193 100.0
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 9.0e-86 320.5 192 88.0
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 1.8e-65 253.1 193 73.6
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 8.8e-65 250.8 192 75.0
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 5.7e-64 248.1 195 71.8
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 2.0e-61 239.6 194 70.6
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.9e-60 235.7 192 71.4
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 1.5e-59 233.4 193 71.0
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 5.7e-56 221.5 198 65.7
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 6.3e-55 218.0 198 64.6
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 2.4e-54 216.1 194 67.5
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 8.8e-49 197.6 124 85.5
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.1e-43 180.6 193 60.1
Medtr0065s0080 Medicago truncatula HOM05D004087 ORTHO05D004787 1.5e-43 180.3 99 92.9
Medtr3g040420 Medicago truncatula HOM05D004087 ORTHO05D004787 4.7e-42 175.3 99 90.9
Medtr1g116050 Medicago truncatula HOM05D004087 ORTHO05D004787 1.5e-40 170.2 98 87.8
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 1.5e-40 170.2 136 66.2
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 2.6e-40 169.5 138 66.7
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 7.5e-40 167.9 189 55.6
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 2.2e-39 166.4 136 70.6
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 1.8e-38 163.3 186 55.4
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 9.1e-38 161.0 140 65.0
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 2.0e-37 159.8 135 66.7
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.3e-36 157.1 140 64.3
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.3e-36 157.1 155 58.7
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 1.3e-36 157.1 155 58.7
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 3.8e-36 155.6 126 68.3
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 5.5e-35 151.8 196 52.6
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 7.2e-35 151.4 189 54.5
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 4.7e-34 148.7 101 75.2
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 8.0e-34 147.9 128 67.2
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.3e-33 146.4 127 65.4
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 4.0e-33 145.6 101 76.2
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 8.9e-33 144.4 134 61.9
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 4.4e-32 142.1 170 54.1
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 7.5e-32 141.4 198 49.0
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 9.8e-32 141.0 111 65.8
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 1.1e-30 137.5 153 52.9
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 1.1e-30 137.5 101 66.3
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 2.4e-30 136.3 141 53.2
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 5.4e-30 135.2 187 51.3
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 9.2e-30 134.4 151 53.0
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 4.6e-29 132.1 171 48.0
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 3.9e-28 129.0 125 56.8
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 3.9e-28 129.0 125 56.8
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 1.9e-27 126.7 93 69.9
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 2.5e-27 126.3 157 50.3
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 3.3e-27 125.9 189 46.0
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 5.6e-27 125.2 93 68.8
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 5.6e-27 125.2 197 43.7
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 5.6e-27 125.2 177 45.8
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 7.3e-27 124.8 87 72.4
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 1.6e-26 123.6 126 56.3
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 3.6e-26 122.5 180 45.0
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 1.0e-25 120.9 95 65.3
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 1.8e-25 120.2 129 53.5
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 8.9e-25 117.9 127 54.3
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 6.4e-23 111.7 146 47.3
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 3.0e-20 102.8 150 52.0
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.5e-19 100.5 163 39.3
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 4.3e-19 99.0 115 47.8
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 7.3e-19 98.2 105 46.7
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 7.3e-19 98.2 96 52.1
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 1.6e-18 97.1 89 52.8
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.1e-18 96.7 100 50.0
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 2.1e-18 96.7 89 53.9
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 2.1e-18 96.7 91 54.9
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 4.7e-18 95.5 112 47.3
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 6.2e-18 95.1 196 41.3
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 6.2e-18 95.1 108 46.3
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 8.1e-18 94.7 89 52.8
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 1.1e-17 94.4 89 51.7
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 1.4e-17 94.0 89 52.8
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 1.8e-17 93.6 195 36.4
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 1.8e-17 93.6 91 52.7
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 1.8e-17 93.6 89 55.1
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.8e-17 93.6 89 55.1
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.8e-17 93.6 89 55.1
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.8e-17 93.6 87 51.7
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 2.3e-17 93.2 91 52.7
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 2.3e-17 93.2 91 52.7
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 4.0e-17 92.4 91 50.5
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 4.0e-17 92.4 180 37.2
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 4.0e-17 92.4 89 53.9
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.0e-17 92.4 109 46.8
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 5.2e-17 92.0 105 45.7
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 5.2e-17 92.0 87 52.9
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 5.2e-17 92.0 91 53.8
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 5.2e-17 92.0 89 52.8
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 5.2e-17 92.0 89 51.7
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 6.8e-17 91.7 104 46.2
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 6.8e-17 91.7 87 50.6
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 8.9e-17 91.3 90 50.0
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 8.9e-17 91.3 91 49.5
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 8.9e-17 91.3 115 43.5
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 8.9e-17 91.3 89 51.7
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 1.2e-16 90.9 154 35.7
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 1.5e-16 90.5 154 35.7
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 1.5e-16 90.5 103 47.6
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 2.0e-16 90.1 89 50.6
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 2.0e-16 90.1 102 45.1
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 2.0e-16 90.1 170 35.9
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 2.6e-16 89.7 105 44.8
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 2.6e-16 89.7 92 48.9
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 3.4e-16 89.4 89 49.4
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.4e-16 89.4 89 49.4
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 3.4e-16 89.4 85 51.8
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 3.4e-16 89.4 90 52.2
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 3.4e-16 89.4 110 43.6
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 3.4e-16 89.4 87 51.7
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 4.4e-16 89.0 92 47.8
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 5.8e-16 88.6 90 50.0
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 5.8e-16 88.6 90 50.0
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 5.8e-16 88.6 90 50.0
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 5.8e-16 88.6 90 50.0
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 5.8e-16 88.6 90 50.0
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 5.8e-16 88.6 87 49.4
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 5.8e-16 88.6 89 49.4
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 7.5e-16 88.2 87 50.6
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 9.8e-16 87.8 92 46.7
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 9.8e-16 87.8 92 46.7
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 9.8e-16 87.8 92 46.7
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 1.3e-15 87.4 90 47.8
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.3e-15 87.4 89 50.6
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 1.7e-15 87.0 110 43.6
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 1.7e-15 87.0 128 42.2
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 1.7e-15 87.0 200 40.0
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.2e-15 86.7 154 39.6
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 3.7e-15 85.9 193 34.2
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 3.7e-15 85.9 89 48.3
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 3.7e-15 85.9 198 34.8
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 4.9e-15 85.5 91 47.3
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 6.4e-15 85.1 193 35.8
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 1.1e-14 84.3 183 33.9
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 1.4e-14 84.0 110 42.7
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 1.4e-14 84.0 87 48.3
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 1.9e-14 83.6 87 48.3
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.9e-14 83.6 108 43.5
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 9.2e-14 81.3 185 34.6
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 1.6e-13 80.5 144 35.4
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 2.1e-13 80.1 179 35.2
TWI36G1524 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 3.9e-12 75.9 100 52.0
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 8.6e-12 74.7 84 46.4
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.5e-11 73.9 73 52.1
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 4.3e-11 72.4 91 45.1
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 5.6e-11 72.0 91 45.1
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 5.6e-11 72.0 69 55.1
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 1.2e-10 70.9 112 41.1
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 1.2e-10 70.9 80 46.2
Gohir.A04G096700 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.6e-10 70.5 93 47.3
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 8.1e-10 68.2 73 45.2
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 4.0e-09 65.9 112 33.0
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 6.8e-09 65.1 109 37.6
Nitab4.5_0013199g0010 Nicotiana tabacum HOM05D004087 ORTHO05D004787 6.8e-09 65.1 140 37.9
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 6.8e-09 65.1 144 36.8
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 4.4e-08 62.4 80 47.5
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 4.4e-08 62.4 59 55.9
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 9.9e-08 61.2 70 45.7
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 1.3e-07 60.8 60 51.7
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 1.3e-07 60.8 74 43.2
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 2.2e-07 60.1 60 51.7
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 2.2e-07 60.1 60 48.3
CSS0038746 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 2.4e-06 56.6 127 40.2


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