Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr4g064720 Medicago truncatula HOM05D008718 ORTHO05D010957 3.6e-70 268.1 132 100.0
Medtr1g056190 Medicago truncatula HOM05D008718 ORTHO05D010957 1.5e-20 103.2 68 70.6
Medtr1g040395 Medicago truncatula HOM05D008718 ORTHO05D010957 8.0e-17 90.9 67 64.2
Medtr4g052790 Medicago truncatula HOM05D008718 ORTHO05D010957 1.1e-15 87.0 46 84.8
TPR.G2407 Trifolium pratense HOM05D008718 ORTHO05D010957 1.2e-12 77.0 67 55.2
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 1.6e-12 76.6 68 50.0
Medtr7g052220 Medicago truncatula HOM05D008718 ORTHO05D010957 2.6e-12 75.9 63 55.6
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 5.9e-12 74.7 72 51.4
Medtr7g059235 Medicago truncatula HOM05D008718 ORTHO05D010957 8.5e-11 70.9 60 48.3
Medtr5g080880 Medicago truncatula HOM05D001009 ORTHO05D000829 3.6e-09 65.5 66 42.4
Medtr1g009970 Medicago truncatula HOM05D008161 ORTHO05D010957 1.4e-08 63.5 52 55.8
Medtr2g086830 Medicago truncatula HOM05D008718 ORTHO05D010957 1.8e-08 63.2 59 49.2
TPR.G5368 Trifolium pratense HOM05D008718 ORTHO05D000022 1.8e-08 63.2 63 50.8
TPR.G544 Trifolium pratense HOM05D008718 ORTHO05D010957 1.8e-08 63.2 61 49.2
Medtr8g063800 Medicago truncatula HOM05D008718 ORTHO05D010957 2.3e-08 62.8 60 51.7
Medtr7g083135 Medicago truncatula HOM05D008718 ORTHO05D010957 4.0e-08 62.0 57 50.9
Medtr4g051668 Medicago truncatula HOM05D014162 ORTHO05D016238 5.2e-08 61.6 52 51.9
Medtr8g045220 Medicago truncatula HOM05D007838 ORTHO05D010957 5.2e-08 61.6 68 47.1
TPR.G2830 Trifolium pratense HOM05D008718 ORTHO05D010957 5.2e-08 61.6 61 47.5
TPR.G34821 Trifolium pratense HOM05D008718 ORTHO05D010957 5.2e-08 61.6 61 47.5
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 1.2e-07 60.5 62 46.8
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.6e-07 59.3 68 44.1
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.6e-07 59.3 68 44.1
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 2.6e-07 59.3 68 44.1
TPR.G17895 Trifolium pratense HOM05D000003 ORTHO05D000022 2.6e-07 59.3 63 47.6
Medtr1g018515 Medicago truncatula HOM05D008718 ORTHO05D010957 3.3e-07 58.9 47 57.4
Hma1.2p1_0931F.1_g238170 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 7.5e-07 57.8 68 39.7
Lj1P723T10 Lonicera japonica HOM05D016027 ORTHO05D010957 9.7e-07 57.4 67 40.3
Medtr6g086670 Medicago truncatula HOM05D008718 ORTHO05D010957 9.7e-07 57.4 57 47.4
QL03p010769 Quercus lobata HOM05D000155 ORTHO05D000022 9.7e-07 57.4 67 40.3
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 1.3e-06 57.0 65 40.0
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 1.3e-06 57.0 52 51.9
TPR.G21331 Trifolium pratense HOM05D000003 ORTHO05D000022 1.3e-06 57.0 63 46.0
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.7e-06 56.6 65 41.5
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-06 56.2 66 40.9
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-06 55.8 66 40.9
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.8e-06 55.8 66 40.9
Ca_11781_v3 Cicer arietinum L. HOM05D000155 ORTHO05D000022 3.7e-06 55.5 113 37.2
TPR.G36503 Trifolium pratense HOM05D008718 ORTHO05D010957 3.7e-06 55.5 63 46.0
CSS0032088 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.8e-06 55.1 66 39.4
TPR.G33526 Trifolium pratense HOM05D000155 ORTHO05D000022 6.3e-06 54.7 63 47.6
Atru.chr11.82 Acer truncatum HOM05D000003 ORTHO05D000022 8.2e-06 54.3 67 40.3
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 8.2e-06 54.3 66 40.9


User provided reference genes

Program Settings