Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 2.1e-81 306.2 225 100.0
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 5.3e-61 238.4 227 88.1
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 9.6e-55 217.6 226 82.7
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 1.6e-54 216.9 226 84.1
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 4.0e-53 212.2 226 80.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 4.0e-53 212.2 225 82.2
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 9.0e-53 211.1 226 81.4
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.2e-52 210.7 226 80.1
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 1.0e-48 197.6 230 78.7
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 1.0e-48 197.6 230 77.8
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.5e-47 193.7 184 89.7
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 7.6e-44 181.4 184 84.2
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 7.6e-44 181.4 220 75.5
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 2.2e-43 179.9 226 74.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 2.2e-43 179.9 198 80.3
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.2e-43 179.9 222 72.1
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 4.9e-43 178.7 227 74.0
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.4e-42 177.2 216 70.8
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.4e-42 177.2 168 83.9
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.5e-42 176.4 220 75.0
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 2.5e-42 176.4 225 73.8
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 5.5e-42 175.3 184 81.0
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 7.1e-42 174.9 184 80.4
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 7.1e-42 174.9 217 75.6
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 1.2e-41 174.1 172 86.0
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 2.1e-41 173.3 176 83.5
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 3.5e-41 172.6 184 82.1
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 7.9e-41 171.4 200 78.5
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 7.9e-41 171.4 205 77.1
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-40 171.0 184 79.3
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.3e-40 170.6 229 73.8
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.3e-40 170.6 177 83.1
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.8e-40 170.2 215 72.6
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.1e-40 168.7 225 73.3
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 5.1e-40 168.7 223 72.6
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 6.7e-40 168.3 180 77.2
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 8.7e-40 167.9 225 72.0
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 1.9e-39 166.8 226 72.1
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.5e-39 166.4 180 72.2
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 2.5e-39 166.4 206 78.2
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 2.5e-39 166.4 212 73.1
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 4.3e-39 165.6 229 74.2
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 7.4e-39 164.9 226 71.7
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 1.6e-38 163.7 218 75.7
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 2.1e-38 163.3 210 73.3
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 3.7e-38 162.5 225 71.6
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 4.8e-38 162.2 171 81.9
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 4.8e-38 162.2 221 68.8
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.8e-38 162.2 229 69.4
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 6.3e-38 161.8 229 69.4
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.4e-37 160.6 225 71.6
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.1e-37 159.5 229 69.0
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 4.1e-37 159.1 220 69.5
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 4.1e-37 159.1 219 70.8
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 9.0e-37 157.9 209 69.9
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.2e-36 157.5 171 81.3
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.2e-36 157.5 207 73.9
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.2e-36 157.5 202 73.3
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 3.4e-36 156.0 204 72.1
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.3e-35 154.1 206 75.2
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.7e-35 153.7 224 64.3
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 2.2e-35 153.3 229 68.1
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 8.4e-35 151.4 229 60.3
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.1e-34 151.0 222 70.3
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.4e-34 150.6 111 80.2
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 2.5e-34 149.8 183 78.7
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 5.5e-34 148.7 240 50.4
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 5.5e-34 148.7 196 70.4
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 9.3e-34 147.9 165 83.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.2e-33 147.5 222 68.9
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.2e-33 147.5 246 63.0
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 2.1e-33 146.7 225 64.0
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 2.1e-33 146.7 225 64.0
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 2.1e-33 146.7 225 64.0
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.0e-32 144.4 229 69.4
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 1.9e-31 140.2 169 79.3
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 3.3e-31 139.4 224 65.6
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 4.3e-31 139.0 221 66.1
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 9.7e-31 137.9 203 70.9
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 1.3e-30 137.5 142 91.5
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 4.8e-30 135.6 204 69.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 6.3e-30 135.2 212 68.4
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.1e-29 134.4 216 66.2
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.4e-29 134.0 144 88.9
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.8e-29 133.7 174 74.1
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 2.4e-29 133.3 225 60.9
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.4e-29 133.3 204 70.6
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 3.1e-29 132.9 225 61.3
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 5.3e-29 132.1 225 61.3
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 1.5e-28 130.6 229 61.1
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.2e-27 126.7 228 53.5
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.1e-26 124.4 169 75.1
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.9e-26 123.6 230 61.7
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 4.2e-26 122.5 174 71.3
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 4.2e-26 122.5 167 73.1
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 2.7e-25 119.8 165 68.5
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.7e-22 110.5 57 89.5
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 3.7e-22 109.4 193 58.0
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 2.6e-20 103.2 234 47.4
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 3.4e-20 102.8 126 89.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 2.9e-19 99.8 102 60.8
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 3.8e-19 99.4 147 75.5
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 6.5e-19 98.6 102 60.8
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 2.5e-18 96.7 51 88.2
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 1.6e-17 94.0 111 59.5
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.8e-16 90.5 166 68.1
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 3.9e-16 89.4 64 71.9
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 3.3e-15 86.3 95 56.8
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 4.1e-13 79.3 173 65.9
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.6e-12 77.4 71 63.4
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 3.5e-12 76.3 38 89.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.8e-11 72.8 38 84.2
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 5.0e-11 72.4 105 43.8
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 2.3e-08 63.5 56 57.1
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 3.0e-08 63.2 40 70.0
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 1.5e-07 60.8 71 47.9


User provided reference genes

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