Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g094720 Medicago truncatula HOM05D004349 ORTHO05D005097 3.1e-90 335.1 169 100.0
Medtr6g471120 Medicago truncatula HOM05D004349 ORTHO05D005097 9.0e-90 333.6 169 99.4
Psat5g280400 Pisum sativum HOM05D004349 ORTHO05D005097 5.5e-87 324.3 169 95.3
Ca_01401_v3 Cicer arietinum L. HOM05D004349 ORTHO05D005097 7.9e-86 320.5 169 94.1
Phvul.010G156700 Phaseolus vulgaris HOM05D004349 ORTHO05D005097 1.8e-85 319.3 169 92.3
TPR.G11586 Trifolium pratense HOM05D004349 ORTHO05D005097 2.3e-85 318.9 169 94.1
Glyma.08G213500 Glycine max HOM05D004349 ORTHO05D005097 5.1e-85 317.8 169 91.7
Glyma.07G029300 Glycine max HOM05D004349 ORTHO05D005097 6.7e-85 317.4 169 91.7
arahy.Tifrunner.gnm1.ann1.9IE653 Arachis hypogaea HOM05D004349 ORTHO05D005097 2.8e-83 312.0 166 92.8
arahy.Tifrunner.gnm1.ann1.FMT65J Arachis hypogaea HOM05D004349 ORTHO05D005097 8.2e-83 310.5 166 91.6
Haze_20078 Corylus avellana HOM05D004349 ORTHO05D005097 1.8e-82 309.3 169 89.3
Cfa020113 Carpinus fangiana HOM05D004349 ORTHO05D005097 5.3e-82 307.8 169 88.8
LjContig00564g0000037 Lotus japonicus HOM05D004349 ORTHO05D005097 1.5e-81 306.2 169 89.9
CiPaw.09G026100 Carya illinoinensis HOM05D004349 ORTHO05D005097 3.4e-81 305.1 169 87.0
COL.COLO4_29437 Corchorus olitorius HOM05D004349 ORTHO05D005097 7.7e-81 303.9 167 88.6
Duzib093G0127 Durio zibethinus HOM05D004349 ORTHO05D005097 7.7e-81 303.9 169 88.2
QL11p005722 Quercus lobata HOM05D004349 ORTHO05D005097 2.2e-80 302.4 168 86.9
ClCG10G017820 Citrullus lanatus HOM05D004349 ORTHO05D005097 2.9e-80 302.0 169 87.6
TPR.G23269 Trifolium pratense HOM05D004349 ORTHO05D005097 2.9e-80 302.0 169 88.2
MELO3C009592.2 Cucumis melo HOM05D004349 ORTHO05D005097 8.5e-80 300.4 169 86.4
Gohir.D11G331900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 8.5e-80 300.4 169 86.4
Gorai.007G362800 Gossypium raimondii HOM05D004349 ORTHO05D005097 8.5e-80 300.4 169 86.4
Sed0001935 Sechium edule HOM05D004349 ORTHO05D005097 8.5e-80 300.4 169 87.0
TWI74G1533 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 8.5e-80 300.4 169 85.8
Dinv25025 Davidia involucrata HOM05D004349 ORTHO05D005097 1.4e-79 299.7 168 86.9
Sed0019694 Sechium edule HOM05D004349 ORTHO05D005097 2.5e-79 298.9 169 87.0
Ciclev10012936m.g Citrus clementina HOM05D004349 ORTHO05D005097 7.2e-79 297.4 169 86.4
arahy.Tifrunner.gnm1.ann1.2RRL5Q Arachis hypogaea HOM05D004349 ORTHO05D005097 9.4e-79 297.0 194 79.4
Prupe.7G086000 Prunus persica HOM05D004349 ORTHO05D005097 1.6e-78 296.2 166 85.5
Atru.chr8.1222 Acer truncatum HOM05D004349 ORTHO05D005097 2.1e-78 295.8 169 84.0
QL05p072253 Quercus lobata HOM05D004349 ORTHO05D005097 2.1e-78 295.8 168 84.5
Actinidia01590 Actinidia chinensis HOM05D004349 ORTHO05D005097 3.6e-78 295.0 168 86.3
CsaV3_7G005510 Cucumis sativus L. HOM05D004349 ORTHO05D005097 7.9e-78 293.9 169 85.8
FvH4_6g21430 Fragaria vesca HOM05D004349 ORTHO05D005097 7.9e-78 293.9 166 86.7
FAN05G0412 Fragaria x ananassa HOM05D004349 ORTHO05D005097 7.9e-78 293.9 166 86.7
FAN05G3233 Fragaria x ananassa HOM05D004349 ORTHO05D005097 7.9e-78 293.9 166 86.7
RcHm_v2.0_Chr4g0406251 Rosa chinensis HOM05D004349 ORTHO05D005097 7.9e-78 293.9 166 86.7
FAN02G1450 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.4e-77 293.1 166 86.7
TWI77G0543 Tripterygium wilfordii HOM05D004349 ORTHO05D005097 1.4e-77 293.1 168 84.5
Aqoxy1G00443 Aquilegia oxysepala HOM05D004349 ORTHO05D005097 5.1e-77 291.2 168 83.3
Solyc04g081430.3 Solanum lycopersicum HOM05D004349 ORTHO05D005097 6.7e-77 290.8 169 82.8
Sopen04g035040 Solanum pennellii HOM05D004349 ORTHO05D005097 6.7e-77 290.8 169 82.8
THA.LOC104821832 Tarenaya hassleriana HOM05D004349 ORTHO05D005097 1.1e-76 290.0 169 82.8
Potri.016G062800 Populus trichocarpa HOM05D004349 ORTHO05D005097 2.0e-76 289.3 169 82.2
Hma1.2p1_0516F.1_g170550 Hydrangea macrophylla HOM05D004349 ORTHO05D005097 2.5e-76 288.9 168 83.3
Nitab4.5_0001874g0080 Nicotiana tabacum HOM05D004349 ORTHO05D005097 2.5e-76 288.9 169 82.2
GSVIVG01033427001 Vitis vinifera HOM05D004349 ORTHO05D005097 3.3e-76 288.5 169 82.8
EL10Ac2g02766 Beta vulgaris HOM05D004349 ORTHO05D005097 4.3e-76 288.1 167 82.6
Manes.08G039900 Manihot esculenta HOM05D004349 ORTHO05D005097 4.3e-76 288.1 169 82.8
MD14G1049500 Malus domestica HOM05D004349 ORTHO05D005097 5.7e-76 287.7 166 83.7
PSO528G0119 Papaver somniferum HOM05D004349 ORTHO05D005097 7.4e-76 287.3 169 81.7
PSO170G4263 Papaver somniferum HOM05D004349 ORTHO05D005097 1.3e-75 286.6 169 81.7
VMungo0331G0313 Vigna mungo HOM05D004349 ORTHO05D005097 1.7e-75 286.2 147 93.9
Cc09_g02100 Coffea canephora HOM05D004349 ORTHO05D005097 2.2e-75 285.8 169 83.4
Rhsim04G0092400 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.2e-75 285.8 168 82.1
Rhsim04G0092200 Rhododendron simsii HOM05D004349 ORTHO05D005097 2.8e-75 285.4 168 81.5
Peaxi162Scf00463g00127 Petunia axillaris HOM05D004349 ORTHO05D005097 4.8e-75 284.6 169 80.5
MD12G1050700 Malus domestica HOM05D004349 ORTHO05D005097 6.3e-75 284.3 166 82.5
Lalb_Chr23g0277751 Lupinus albus HOM05D004349 ORTHO05D005097 8.2e-75 283.9 169 82.2
ECA240G0294 Erigeron canadensis HOM05D004349 ORTHO05D005097 1.4e-74 283.1 169 83.4
AL6G12510 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 2.4e-74 282.3 169 79.9
Sp6g39510 Schrenkiella parvula HOM05D004349 ORTHO05D005097 2.4e-74 282.3 169 79.9
Thhalv10021663m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 3.1e-74 282.0 169 79.3
FAN09G4703 Fragaria x ananassa HOM05D004349 ORTHO05D005097 4.1e-74 281.6 183 78.1
Ah.13g075520 Amaranthus hybridus HOM05D004349 ORTHO05D005097 5.3e-74 281.2 169 80.5
Cpa.g.sc85.16 Carica papaya HOM05D004349 ORTHO05D005097 5.3e-74 281.2 169 81.7
FAN14G0676 Fragaria x ananassa HOM05D004349 ORTHO05D005097 5.3e-74 281.2 183 78.1
FAN14G3215 Fragaria x ananassa HOM05D004349 ORTHO05D005097 5.3e-74 281.2 183 78.1
Migut.L01584 Erythranthe guttata HOM05D004349 ORTHO05D005097 6.9e-74 280.8 169 81.1
MSTRG.10496 Avicennia marina HOM05D004349 ORTHO05D005097 1.2e-73 280.0 169 80.5
CANSAT54G2032 Cannabis sativa HOM05D004349 ORTHO05D005097 1.2e-73 280.0 169 79.9
Lalb_Chr19g0125421 Lupinus albus HOM05D004349 ORTHO05D005097 1.2e-73 280.0 169 79.3
Thhalv10014853m.g Eutrema salsugineum HOM05D004349 ORTHO05D005097 1.5e-73 279.6 169 79.3
DCAR_018883 Daucus carota HOM05D004349 ORTHO05D005097 2.6e-73 278.9 182 75.8
Aa31LG1G21860 Aethionema arabicum HOM05D004349 ORTHO05D005097 3.4e-73 278.5 169 78.1
AT5G03220 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 4.5e-73 278.1 169 78.7
AL6G12940 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 7.7e-73 277.3 167 79.0
PGSC0003DMG401009863 Solanum tuberosum HOM05D004349 ORTHO05D005097 7.7e-73 277.3 186 74.7
Nn2g15821 Nelumbo nucifera HOM05D004349 ORTHO05D005097 1.3e-72 276.6 167 82.0
Thecc.05G180500 Theobroma cacao HOM05D004349 ORTHO05D005097 2.2e-72 275.8 149 88.6
Carub.0006s0201 Capsella rubella HOM05D004349 ORTHO05D005097 3.8e-72 275.0 169 77.5
TAR623G1044 Trochodendron aralioides HOM05D004349 ORTHO05D005097 5.0e-72 274.6 169 81.7
AT5G03500 Arabidopsis thaliana HOM05D004349 ORTHO05D005097 6.5e-72 274.2 169 77.5
Eucgr.A02508 Eucalyptus grandis HOM05D004349 ORTHO05D005097 1.9e-71 272.7 149 87.9
SGA_v2.0_scaffold21G09532 Striga asiatica HOM05D004349 ORTHO05D005097 1.9e-71 272.7 169 79.3
Nitab4.5_0000571g0040 Nicotiana tabacum HOM05D004349 ORTHO05D005097 5.5e-71 271.2 192 72.4
CARHR210130 Cardamine hirsuta HOM05D004349 ORTHO05D005097 7.2e-71 270.8 169 76.3
ECA248G3305 Erigeron canadensis HOM05D004349 ORTHO05D005097 1.6e-70 269.6 169 78.7
CARHR040500 Cardamine hirsuta HOM05D004349 ORTHO05D005097 2.1e-70 269.2 169 75.1
SHI30021 Sapria himalayana HOM05D004349 ORTHO05D005097 7.9e-70 267.3 167 75.4
Sabra06G0151800 Salix brachista HOM05D004349 ORTHO05D005097 1.0e-69 266.9 150 84.0
SEGI_10501 Sequoiadendron giganteum HOM05D004349 ORTHO05D005097 1.4e-69 266.5 168 73.8
BcaC03g13019 Brassica carinata HOM05D004349 ORTHO05D005097 1.8e-69 266.2 169 76.3
Hund26707 Selenicereus undatus HOM05D004349 ORTHO05D005097 1.8e-69 266.2 207 66.2
Gohir.A11G314900 Gossypium hirsutum HOM05D004349 ORTHO05D005097 3.0e-69 265.4 143 88.1
BolC2t06089H Brassica oleracea HOM05D004349 ORTHO05D005097 3.9e-69 265.0 169 75.7
TAR623G0936 Trochodendron aralioides HOM05D004349 ORTHO05D005097 6.7e-69 264.2 149 83.9
Lj2C360G6 Lonicera japonica HOM05D004349 ORTHO05D005097 8.8e-69 263.8 149 84.6
AUR62015286 Chenopodium quinoa HOM05D004349 ORTHO05D005097 2.0e-68 262.7 149 83.9
HPP92_013495 Vanilla planifolia HOM05D004349 ORTHO05D005097 2.0e-68 262.7 158 81.6
Rhsim10G0130900 Rhododendron simsii HOM05D004349 ORTHO05D005097 4.4e-68 261.5 214 64.0
Lsat_1_v5_gn_1_58740 Lactuca sativa HOM05D004349 ORTHO05D005097 5.7e-68 261.2 145 86.9
HPP92_026048 Vanilla planifolia HOM05D004349 ORTHO05D005097 1.7e-67 259.6 158 81.0
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 1.4e-66 256.5 150 80.7
ATR0580G353 Amborella trichopoda HOM05D004349 ORTHO05D005097 7.0e-66 254.2 146 82.2
CSS0044984 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 7.0e-66 254.2 153 81.7
Mapoly0052s0099 Marchantia polymorpha HOM05D004349 ORTHO05D005097 2.6e-65 252.3 168 70.2
MBI18_g03872_MAGBIO Magnolia biondii HOM05D004349 ORTHO05D005097 3.5e-65 251.9 166 74.1
CDE02G3593 Ceratophyllum demersum HOM05D000001 ORTHO05D000424 4.5e-65 251.5 154 78.6
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 4.5e-65 251.5 169 72.8
Os04g0661800 Oryza sativa ssp. japonica HOM05D004349 ORTHO05D005097 5.9e-65 251.1 169 75.1
Prupe.6G266300 Prunus persica HOM05D004349 ORTHO05D005097 5.0e-64 248.1 177 72.9
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 1.1e-63 246.9 149 79.9
Zm00001eb067450 Zea mays HOM05D004349 ORTHO05D005097 5.5e-63 244.6 168 73.2
vmacro17893 Vaccinium macrocarpon HOM05D004349 ORTHO05D005097 7.2e-63 244.2 239 56.5
arahy.Tifrunner.gnm1.ann1.UX8DIM Arachis hypogaea HOM05D004349 ORTHO05D005097 1.2e-62 243.4 166 78.9
PGR004G2245 Punica granatum HOM05D004349 ORTHO05D005097 2.3e-61 239.2 126 86.5
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 5.7e-60 234.6 149 75.8
CAN.G311.28 Capsicum annuum HOM05D004349 ORTHO05D005097 1.1e-58 230.3 124 85.5
Prupe.1G181600 Prunus persica HOM05D004349 ORTHO05D005097 1.1e-58 230.3 156 75.6
Zm00001eb432780 Zea mays HOM05D004349 ORTHO05D005097 1.1e-58 230.3 167 70.7
Carub.0006s2456 Capsella rubella HOM05D004349 ORTHO05D005097 2.4e-58 229.2 170 70.0
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 3.1e-58 228.8 149 74.5
BcaNung06685 Brassica carinata HOM05D004349 ORTHO05D005097 2.2e-56 222.6 152 71.7
Sc13g0002530 Simmondsia chinensis HOM05D004349 ORTHO05D005097 1.2e-54 216.9 123 82.1
AL3G38450 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 2.3e-53 212.6 132 76.5
BolC9t60086H Brassica oleracea HOM05D004349 ORTHO05D005097 3.0e-53 212.2 168 64.9
Prupe.8G249100 Prunus persica HOM05D004349 ORTHO05D005097 2.0e-52 209.5 166 68.1
HanXRQChr01g0024771 Helianthus annuus HOM05D004349 ORTHO05D005097 3.3e-52 208.8 124 84.7
SMO340G0091 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 7.5e-52 207.6 155 65.2
CBR_g46752 Chara braunii HOM05D004349 ORTHO05D005097 9.7e-52 207.2 188 55.3
Prupe.1G300700 Prunus persica HOM05D004349 ORTHO05D005097 1.1e-50 203.8 121 84.3
Prupe.7G024200 Prunus persica HOM05D004349 ORTHO05D005097 1.1e-50 203.8 121 84.3
Prupe.1G547000 Prunus persica HOM05D004349 ORTHO05D005097 1.4e-50 203.4 121 83.5
HanXRQChr03g0090511 Helianthus annuus HOM05D004349 ORTHO05D005097 2.4e-50 202.6 124 80.6
Prupe.3G021700 Prunus persica HOM05D004349 ORTHO05D005097 2.4e-50 202.6 121 83.5
Dinv24030 Davidia involucrata HOM05D004349 ORTHO05D005097 4.5e-49 198.4 124 82.3
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 5.9e-49 198.0 155 67.7
Prupe.1G035300 Prunus persica HOM05D004349 ORTHO05D005097 1.0e-48 197.2 123 79.7
CSS0033717 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 1.5e-47 193.4 141 71.6
ATR0564G039 Amborella trichopoda HOM05D004349 ORTHO05D005097 4.7e-46 188.3 146 69.2
SMO358G0681 Selaginella moellendorffii HOM05D004349 ORTHO05D005097 1.4e-45 186.8 134 65.7
RcHm_v2.0_Chr3g0478001 Rosa chinensis HOM05D004349 ORTHO05D005097 9.1e-42 174.1 106 84.0
Oeu057599.1 Olea europaea HOM05D004349 ORTHO05D005097 9.5e-39 164.1 90 81.1
Prupe.2G085900 Prunus persica HOM05D004349 ORTHO05D005097 1.2e-38 163.7 90 88.9
FAN05G0350 Fragaria x ananassa HOM05D004349 ORTHO05D005097 9.8e-36 154.1 94 85.1
Sabra16G0064800 Salix brachista HOM05D004349 ORTHO05D005097 3.3e-31 139.0 83 81.9
Pp3c5_20850 Physcomitrium patens HOM05D004349 ORTHO05D005097 1.8e-29 133.3 115 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2767 Anthoceros agrestis HOM05D004349 ORTHO05D005097 2.2e-27 126.3 87 69.0
AagrBONN_evm.TU.Sc2ySwM_362.1623 Anthoceros agrestis HOM05D004349 ORTHO05D005097 1.4e-26 123.6 100 61.0
CARHR099790 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.2e-25 120.6 81 70.4
RcHm_v2.0_Chr3g0478061 Rosa chinensis HOM05D004349 ORTHO05D005097 1.7e-24 116.7 103 62.1
Rhsim04G0093300 Rhododendron simsii HOM05D004349 ORTHO05D005097 3.0e-24 115.9 73 79.5
CSS0042444 Camellia sinensis var. sinensis HOM05D004349 ORTHO05D005097 6.6e-24 114.8 75 76.0
AL6G12900 Arabidopsis lyrata HOM05D004349 ORTHO05D005097 1.2e-22 110.5 78 66.7
CARHR251030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 1.1e-21 107.5 74 67.6
CARHR218030 Cardamine hirsuta HOM05D004349 ORTHO05D005097 6.4e-19 98.2 64 71.9
CARHR258920 Cardamine hirsuta HOM05D004349 ORTHO05D005097 4.6e-17 92.0 64 71.9
MCO10G402 Micromonas commoda HOM05D004349 ORTHO05D005097 6.6e-16 88.2 160 36.2
PRCOL_00002553 Prasinoderma coloniale HOM05D004349 ORTHO05D005097 6.6e-16 88.2 130 40.8
RcHm_v2.0_Chr3g0478211 Rosa chinensis HOM05D004349 ORTHO05D005097 6.2e-14 81.6 49 83.7
RcHm_v2.0_Chr3g0478341 Rosa chinensis HOM05D004349 ORTHO05D005097 6.2e-14 81.6 49 83.7
Rhsim04G0093100 Rhododendron simsii HOM05D004349 ORTHO05D005097 1.2e-12 77.4 44 75.0
RcHm_v2.0_Chr3g0478621 Rosa chinensis HOM05D004349 ORTHO05D005097 2.0e-12 76.6 108 49.1
FAN04G2473 Fragaria x ananassa HOM05D004349 ORTHO05D005097 1.1e-10 70.9 38 81.6
Cre01.g062902 Chlamydomonas reinhardtii HOM05D004349 ORTHO05D005097 4.1e-10 68.9 150 34.0


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