Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr2g060475 Medicago truncatula HOM05D006809 ORTHO05D008609 9.9e-70 266.5 124 100.0
Cc11_g04700 Coffea canephora HOM05D006809 ORTHO05D008609 9.7e-49 196.8 105 79.0
Rhsim08G0143500 Rhododendron simsii HOM05D006809 ORTHO05D008609 2.2e-48 195.7 105 78.1
FAN08G0740 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.5e-46 189.5 104 75.0
Solyc12g038550.1 Solanum lycopersicum HOM05D006809 ORTHO05D008609 2.2e-45 185.7 116 69.8
EL10Ac5g11165 Beta vulgaris HOM05D006809 ORTHO05D008609 8.5e-45 183.7 105 72.4
ECA246G1387 Erigeron canadensis HOM05D006809 ORTHO05D008609 4.2e-44 181.4 104 74.0
CDE10G1173 Ceratophyllum demersum HOM05D006809 ORTHO05D008609 5.5e-44 181.0 96 80.2
Aa31LG11G2360 Aethionema arabicum HOM05D006809 ORTHO05D008609 7.2e-44 180.6 104 74.0
Hund09945 Selenicereus undatus HOM05D006809 ORTHO05D008609 7.9e-43 177.2 105 73.3
Ah.11g047550 Amaranthus hybridus HOM05D006809 ORTHO05D008609 3.9e-42 174.9 105 69.5
Pp3c18_4200 Physcomitrium patens HOM05D006809 ORTHO05D008609 5.1e-42 174.5 103 71.8
A03p46650 Brassica napus HOM05D006809 ORTHO05D008609 2.2e-40 169.1 105 70.5
BraA03t13789Z Brassica rapa HOM05D006809 ORTHO05D008609 2.2e-40 169.1 105 70.5
AagrBONN_evm.TU.Sc2ySwM_117.1929 Anthoceros agrestis HOM05D006809 ORTHO05D008609 2.8e-40 168.7 104 64.4
MD06G1203600 Malus domestica HOM05D006809 ORTHO05D008609 3.6e-35 151.8 104 65.4
Hma1.2p1_0060F.1_g032870 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 1.0e-34 150.2 104 64.4
AUR62039658 Chenopodium quinoa HOM05D006809 ORTHO05D008609 6.3e-32 141.0 105 59.0
Lsat_1_v5_gn_5_23620 Lactuca sativa HOM05D006809 ORTHO05D008609 8.2e-32 140.6 104 60.6
AUR62032115 Chenopodium quinoa HOM05D006809 ORTHO05D008609 9.1e-31 137.1 105 57.1
Medtr2g060520 Medicago truncatula HOM05D006809 ORTHO05D008609 1.9e-28 129.4 59 98.3
vmacro16181 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 3.6e-27 125.2 67 76.1
Ca_02916_v3 Cicer arietinum L. HOM05D006809 ORTHO05D008609 4.7e-27 124.8 57 94.7
Lj1g0027663 Lotus japonicus HOM05D006809 ORTHO05D008609 5.2e-26 121.3 148 42.6
arahy.Tifrunner.gnm1.ann1.23QZVI Arachis hypogaea HOM05D006809 ORTHO05D008609 6.7e-26 120.9 57 87.7
CANSAT11G1370 Cannabis sativa HOM05D006809 ORTHO05D008609 6.7e-26 120.9 146 40.4
VMungo1309G1606 Vigna mungo HOM05D006809 ORTHO05D008609 6.7e-26 120.9 56 91.1
Glyma.06G205000 Glycine max HOM05D006809 ORTHO05D008609 8.8e-26 120.6 56 89.3
COL.COLO4_24315 Corchorus olitorius HOM05D006809 ORTHO05D008609 2.0e-25 119.4 147 39.5
Thecc.03G104800 Theobroma cacao HOM05D006809 ORTHO05D008609 4.4e-25 118.2 147 39.5
Lalb_Chr07g0189231 Lupinus albus HOM05D006809 ORTHO05D008609 5.7e-25 117.9 57 87.7
Lj5A134T75 Lonicera japonica HOM05D006809 ORTHO05D008609 7.5e-25 117.5 146 39.7
TWI81G0697 Tripterygium wilfordii HOM05D006809 ORTHO05D008609 7.5e-25 117.5 146 39.7
Glyma.04G160301 Glycine max HOM05D006809 ORTHO05D008609 9.7e-25 117.1 55 87.3
Nitab4.5_0001723g0010 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.7e-24 116.3 62 77.4
Sp2g24250 Schrenkiella parvula HOM05D006809 ORTHO05D008609 1.7e-24 116.3 63 73.0
MELO3C002045.2 Cucumis melo HOM05D006809 ORTHO05D008609 2.2e-24 115.9 146 39.7
Oeu014424.1 Olea europaea HOM05D006809 ORTHO05D008609 2.2e-24 115.9 146 38.4
GSVIVG01008127001 Vitis vinifera HOM05D006809 ORTHO05D008609 2.8e-24 115.5 147 38.1
Ciclev10023968m.g Citrus clementina HOM05D006809 ORTHO05D008609 3.7e-24 115.2 147 38.8
RcHm_v2.0_Chr7g0183371 Rosa chinensis HOM05D006809 ORTHO05D008609 6.3e-24 114.4 146 39.0
QL10p020149 Quercus lobata HOM05D006809 ORTHO05D008609 8.2e-24 114.0 57 80.7
FAN13G1268 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.1e-23 113.6 146 37.7
PGSC0003DMG400023259 Solanum tuberosum HOM05D006809 ORTHO05D008609 1.1e-23 113.6 61 75.4
FvH4_5g13570 Fragaria vesca HOM05D006809 ORTHO05D008609 1.8e-23 112.8 146 38.4
FAN18G0725 Fragaria x ananassa HOM05D006809 ORTHO05D008609 1.8e-23 112.8 146 38.4
Nitab4.5_0001797g0090 Nicotiana tabacum HOM05D006809 ORTHO05D008609 1.8e-23 112.8 62 75.8
DCAR_010163 Daucus carota HOM05D006809 ORTHO05D008609 2.4e-23 112.5 146 39.7
Duzib205G0618 Durio zibethinus HOM05D006809 ORTHO05D008609 2.4e-23 112.5 57 77.2
Nn4g23476 Nelumbo nucifera HOM05D006809 ORTHO05D008609 2.4e-23 112.5 57 78.9
SalBow5G3990 Salvia bowleyana HOM05D006809 ORTHO05D008609 2.4e-23 112.5 148 37.8
Prupe.5G207700 Prunus persica HOM05D006809 ORTHO05D008609 3.1e-23 112.1 146 39.0
Sopen12g018840 Solanum pennellii HOM05D006809 ORTHO05D008609 3.1e-23 112.1 59 76.3
TAR629G2676 Trochodendron aralioides HOM05D006809 ORTHO05D008609 3.1e-23 112.1 57 77.2
CsaV3_1G006160 Cucumis sativus L. HOM05D006809 ORTHO05D008609 4.1e-23 111.7 56 82.1
Gorai.001G076000 Gossypium raimondii HOM05D006809 ORTHO05D008609 4.1e-23 111.7 57 77.2
Atru.chr9.503 Acer truncatum HOM05D006809 ORTHO05D008609 7.0e-23 110.9 57 71.9
Sed0027469 Sechium edule HOM05D006809 ORTHO05D008609 7.0e-23 110.9 146 38.4
Eucgr.K02539 Eucalyptus grandis HOM05D006809 ORTHO05D008609 9.1e-23 110.5 146 37.7
Gohir.A07G067300 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.2e-22 110.2 56 76.8
Gohir.D07G071900 Gossypium hirsutum HOM05D006809 ORTHO05D008609 1.2e-22 110.2 56 76.8
CSS0020904 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 1.6e-22 109.8 57 77.2
CiPaw.12G009200 Carya illinoinensis HOM05D006809 ORTHO05D008609 1.6e-22 109.8 57 78.9
HanXRQChr05g0154271 Helianthus annuus HOM05D006809 ORTHO05D008609 2.0e-22 109.4 56 78.6
Hma1.2p1_0060F.1_g032880 Hydrangea macrophylla HOM05D006809 ORTHO05D008609 2.0e-22 109.4 56 76.8
Manes.14G087700 Manihot esculenta HOM05D006809 ORTHO05D008609 2.0e-22 109.4 56 78.6
AT5G60940 Arabidopsis thaliana HOM05D006809 ORTHO05D008609 2.7e-22 109.0 60 73.3
CSS0043969 Camellia sinensis var. sinensis HOM05D006809 ORTHO05D008609 2.7e-22 109.0 57 77.2
Aqoxy3G03648 Aquilegia oxysepala HOM05D006809 ORTHO05D008609 3.5e-22 108.6 57 77.2
CARHR274620 Cardamine hirsuta HOM05D006809 ORTHO05D008609 3.5e-22 108.6 59 74.6
Haze_07749 Corylus avellana HOM05D006809 ORTHO05D008609 3.5e-22 108.6 57 75.4
Actinidia04809 Actinidia chinensis HOM05D006809 ORTHO05D008609 4.5e-22 108.2 57 77.2
Cfa019358 Carpinus fangiana HOM05D006809 ORTHO05D008609 4.5e-22 108.2 57 73.7
PGR044G2265 Punica granatum HOM05D006809 ORTHO05D008609 4.5e-22 108.2 57 73.7
Thhalv10004278m.g Eutrema salsugineum HOM05D006809 ORTHO05D008609 5.9e-22 107.8 57 77.2
vmacro17626 Vaccinium macrocarpon HOM05D006809 ORTHO05D008609 7.7e-22 107.5 126 40.5
Mapoly0118s0024 Marchantia polymorpha HOM05D006809 ORTHO05D008609 1.3e-21 106.7 146 34.2
SGA_v2.0_scaffold313G48281 Striga asiatica HOM05D006809 ORTHO05D008609 1.3e-21 106.7 72 56.9
PSO017G0895 Papaver somniferum HOM05D006809 ORTHO05D008609 2.9e-21 105.5 56 76.8
PSO478G2035 Papaver somniferum HOM05D006809 ORTHO05D008609 2.9e-21 105.5 56 76.8
Carub.0008s2163 Capsella rubella HOM05D006809 ORTHO05D008609 5.0e-21 104.8 57 73.7
MSTRG.11330 Avicennia marina HOM05D006809 ORTHO05D008609 8.5e-21 104.0 59 71.2
Sc12g0007330 Simmondsia chinensis HOM05D006809 ORTHO05D008609 8.5e-21 104.0 63 65.1
BcaC06g33207 Brassica carinata HOM05D006809 ORTHO05D008609 1.1e-20 103.6 59 74.6
ClCG04G011640 Citrullus lanatus HOM05D006809 ORTHO05D000432 1.5e-20 103.2 50 82.0
BolC7t44995H Brassica oleracea HOM05D006809 ORTHO05D008609 1.9e-20 102.8 58 75.9
BcaNung06908 Brassica carinata HOM05D006809 ORTHO05D008609 2.5e-20 102.4 58 75.9
C07p44720 Brassica napus HOM05D006809 ORTHO05D008609 2.5e-20 102.4 58 75.9
AL8G37560 Arabidopsis lyrata HOM05D006809 ORTHO05D008609 3.2e-20 102.1 58 70.7
Zm00001eb057630 Zea mays HOM05D006809 ORTHO05D008609 9.4e-20 100.5 146 33.6
ATR0827G115 Amborella trichopoda HOM05D006809 ORTHO05D008609 3.6e-19 98.6 51 70.6
Dinv22761 Davidia involucrata HOM05D006809 ORTHO05D008609 1.0e-18 97.1 138 36.2
Os03g0754900 Oryza sativa ssp. japonica HOM05D006809 ORTHO05D008609 6.8e-18 94.4 57 64.9
Cpa.g.sc94.80 Carica papaya HOM05D006809 ORTHO05D008609 1.5e-17 93.2 49 79.6
TPR.G23013 Trifolium pratense HOM05D007385 ORTHO05D009349 1.5e-17 93.2 90 52.2
CBR_g41384 Chara braunii HOM05D006809 ORTHO05D000002 2.4e-15 85.9 57 57.9
Phvul.009G203000 Phaseolus vulgaris HOM05D006809 ORTHO05D008609 2.2e-13 79.3 38 92.1
MD14G1214400 Malus domestica HOM05D006809 ORTHO05D008609 6.5e-13 77.8 38 78.9
Ah.11g047540 Amaranthus hybridus HOM05D006809 ORTHO05D008609 8.5e-13 77.4 48 60.4
SMO358G0618 Selaginella moellendorffii HOM05D006809 ORTHO05D008609 4.2e-12 75.1 54 50.0
MD14G1214500 Malus domestica HOM05D006809 ORTHO05D008609 6.1e-11 71.2 36 83.3
Haze_26316 Corylus avellana HOM05D006809 ORTHO05D008609 2.8e-08 62.4 69 36.2
Psat1g128360 Pisum sativum HOM05D006809 ORTHO05D008609 8.3e-08 60.8 27 100.0


User provided reference genes

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