Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 8.7e-185 650.2 337 100.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 3.2e-163 578.6 324 92.3
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.6e-162 576.2 338 88.8
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 9.4e-155 550.4 326 86.8
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.0e-149 532.7 343 82.2
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.4e-147 526.6 327 83.2
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.5e-144 516.5 341 79.8
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.5e-144 516.5 340 79.1
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 2.2e-143 512.7 324 81.8
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.8e-142 509.6 326 80.7
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.6e-133 479.2 334 74.3
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.7e-132 476.5 319 76.5
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.5e-131 472.6 332 73.8
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.8e-129 466.5 324 76.9
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.3e-127 460.3 334 72.2
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 2.2e-127 459.5 321 73.5
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 2.8e-127 459.1 318 74.8
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 5.4e-126 454.9 320 72.8
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.2e-125 453.8 336 71.1
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.5e-125 451.8 323 71.8
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 5.9e-125 451.4 321 71.7
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.0e-124 450.7 323 71.2
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.3e-124 450.3 327 68.5
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.2e-124 449.5 323 68.7
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.2e-124 449.5 321 70.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.8e-124 448.7 321 70.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.0e-124 448.4 321 71.3
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 5.0e-124 448.4 336 69.0
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 6.5e-124 448.0 323 69.7
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.1e-123 447.2 322 68.9
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.9e-123 446.4 322 69.3
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.5e-123 446.0 321 70.7
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 4.2e-123 445.3 333 68.2
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 4.2e-123 445.3 328 69.8
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 9.4e-123 444.1 318 70.8
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.1e-122 443.0 319 70.8
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.6e-122 442.2 326 67.5
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 3.6e-122 442.2 326 67.5
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.0e-122 441.0 319 70.5
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.0e-121 440.7 319 70.5
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 7.5e-120 434.5 330 68.8
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 1.3e-119 433.7 322 66.8
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.7e-119 433.3 321 68.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.7e-119 432.2 323 67.5
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 6.3e-119 431.4 322 66.5
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 8.3e-119 431.0 326 68.1
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.1e-118 430.6 321 67.9
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.4e-118 430.3 321 67.6
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.4e-118 429.5 323 66.9
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.4e-118 429.5 325 65.8
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.2e-117 427.2 307 70.4
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.7e-117 426.0 323 65.9
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 2.7e-117 426.0 327 63.9
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.3e-116 423.7 323 65.6
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 5.0e-116 421.8 321 64.5
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 5.0e-116 421.8 321 64.5
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 5.0e-116 421.8 319 69.9
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 8.6e-116 421.0 323 64.4
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 1.5e-115 420.2 330 67.3
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 4.2e-115 418.7 323 66.6
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.6e-114 416.8 335 62.7
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.4e-113 413.7 304 69.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.8e-113 413.3 304 68.4
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 5.7e-112 408.3 327 64.5
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 5.7e-112 408.3 320 65.0
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.2e-111 406.4 323 64.1
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 3.7e-111 405.6 330 61.2
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.4e-110 403.7 321 65.1
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.4e-110 402.9 323 64.1
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 4.1e-110 402.1 331 63.4
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 4.6e-109 398.7 335 62.1
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 7.8e-109 397.9 339 61.4
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.3e-108 397.1 341 61.6
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 1.7e-108 396.7 291 68.4
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 7.3e-107 391.3 319 63.3
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 3.6e-106 389.0 332 62.0
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 1.4e-105 387.1 271 70.8
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.8e-105 386.7 325 60.3
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 1.2e-104 384.0 322 61.8
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.5e-104 383.6 320 61.2
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 3.7e-103 379.0 342 64.9
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 4.9e-103 378.6 330 59.4
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 3.2e-102 375.9 321 58.9
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.9e-99 366.7 331 58.0
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 7.3e-99 364.8 325 58.2
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.9e-95 352.8 267 68.2
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 4.1e-94 349.0 238 73.5
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 1.0e-92 344.4 327 56.3
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 5.8e-88 328.6 281 59.4
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 3.0e-84 316.2 324 52.8
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.1e-82 310.1 321 55.1
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 4.9e-79 298.9 325 50.2
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 3.2e-78 296.2 318 50.3
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.3e-76 290.8 324 50.0
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 8.1e-74 281.6 331 48.6
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.2e-71 273.5 320 45.9
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 7.4e-67 258.5 324 46.3
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 2.1e-66 256.9 230 61.3
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.5e-64 250.8 188 66.5
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.8e-63 246.1 201 63.2
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 8.4e-63 245.0 188 64.4
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 6.7e-60 235.3 163 75.5
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 4.9e-55 219.2 199 56.8
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 3.2e-46 189.9 254 44.1
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.2e-38 162.2 108 72.2
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 9.4e-38 161.8 108 72.2
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-30 138.3 90 74.4
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.5e-27 127.9 269 29.7
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 1.9e-22 110.9 113 55.8
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.5e-19 101.3 122 45.9
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.2e-14 83.2 84 57.1
MCO05G070 Micromonas commoda HOM05D002465 ORTHO05D008860 1.8e-12 77.8 245 25.7
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.7e-08 63.9 81 49.4


User provided reference genes

Program Settings