Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g099540 Medicago truncatula HOM05D000533 ORTHO05D001069 3.0e-40 167.9 77 100.0
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 6.0e-33 143.7 71 91.5
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 6.0e-33 143.7 71 91.5
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 1.8e-32 142.1 71 90.1
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 1.8e-32 142.1 71 90.1
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 1.8e-32 142.1 71 90.1
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 7.4e-31 136.7 71 84.5
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 7.4e-31 136.7 71 84.5
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.6e-30 135.6 71 83.1
Lalb_Chr20g0116591 Lupinus albus HOM05D000533 ORTHO05D001069 2.1e-30 135.2 71 83.1
Nn1g08631 Nelumbo nucifera HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
Solyc00g500280.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.8e-30 134.8 71 85.9
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 3.7e-30 134.4 71 84.5
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 4.8e-30 134.0 71 83.1
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BolSC45t60905H Brassica oleracea HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BraSC138t45531Z Brassica rapa HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BraSC59t46530Z Brassica rapa HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 8.1e-30 133.3 71 80.3
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 1.1e-29 132.9 71 83.1
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 1.1e-29 132.9 71 84.5
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 1.4e-29 132.5 71 83.1
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 1.4e-29 132.5 71 83.1
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 1.4e-29 132.5 71 83.1
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 3.1e-29 131.3 71 81.7
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 3.1e-29 131.3 71 81.7
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 3.1e-29 131.3 71 81.7
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr00c0504g0575331 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 70 82.9
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr17g0557731 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 83.1
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 4.0e-29 131.0 71 81.7
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 5.3e-29 130.6 71 80.3
Lsat_1_v5_gn_8_137301 Lactuca sativa HOM05D000533 ORTHO05D001069 5.3e-29 130.6 71 80.3
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 5.3e-29 130.6 71 80.3
Lsat_1_v5_gn_9_49240 Lactuca sativa HOM05D000533 ORTHO05D001069 5.3e-29 130.6 71 80.3
Lj2C1238G31 Lonicera japonica HOM05D000533 ORTHO05D001069 6.9e-29 130.2 71 81.7
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 6.9e-29 130.2 71 81.7
RhsimPtG0005000 Rhododendron simsii HOM05D000533 ORTHO05D001069 6.9e-29 130.2 71 81.7
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 6.9e-29 130.2 71 81.7
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 6.9e-29 130.2 71 81.7
Ah.10g027020 Amaranthus hybridus HOM05D000533 ORTHO05D001069 9.0e-29 129.8 71 81.7
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 9.0e-29 129.8 71 81.7
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 9.0e-29 129.8 71 81.7
Migut.D01248 Erythranthe guttata HOM05D000533 ORTHO05D001069 9.0e-29 129.8 71 83.1
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 1.2e-28 129.4 71 77.5
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 1.2e-28 129.4 71 80.3
Sed0015694 Sechium edule HOM05D000533 ORTHO05D001069 1.2e-28 129.4 71 80.3
GSVIVG01012613001 Vitis vinifera HOM05D000533 ORTHO05D001069 2.0e-28 128.6 71 80.3
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 2.6e-28 128.3 71 78.9
arahy.Tifrunner.gnm1.ann1.RF9S3R Arachis hypogaea HOM05D000533 ORTHO05D001069 3.4e-28 127.9 71 78.9
BolSC49t61147H Brassica oleracea HOM05D000533 ORTHO05D001069 4.5e-28 127.5 72 77.8
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 4.5e-28 127.5 71 78.9
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.5e-28 127.5 71 78.9
SEGI_41539 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.5e-28 127.5 71 78.9
Lalb_Chr25g0284051 Lupinus albus HOM05D000533 ORTHO05D001069 7.6e-28 126.7 71 78.9
BolC2t08926H Brassica oleracea HOM05D000533 ORTHO05D001069 1.3e-27 125.9 73 74.0
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 4.9e-27 124.0 71 76.1
arahy.Tifrunner.gnm1.ann1.N9T5J4 Arachis hypogaea HOM05D000533 ORTHO05D001069 8.4e-27 123.2 70 78.6
SEGI_11816 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.1e-26 122.9 71 74.6
Hund30658 Selenicereus undatus HOM05D000533 ORTHO05D001069 1.2e-25 119.4 63 82.5
Gorai.003G071300 Gossypium raimondii HOM05D000533 ORTHO05D001069 1.6e-25 119.0 70 78.6
BolC9t56912H Brassica oleracea HOM05D000533 ORTHO05D001069 2.7e-25 118.2 65 76.9
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-24 115.5 64 79.7
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 2.3e-24 115.2 65 75.4
Gohir.1Z050466 Gossypium hirsutum HOM05D000533 ORTHO05D001069 5.1e-24 114.0 71 76.1
Peaxi162Scf00133g00521 Petunia axillaris HOM05D000533 ORTHO05D001069 1.5e-23 112.5 65 80.0
CAN.G965.3 Capsicum annuum HOM05D000533 ORTHO05D001069 1.9e-23 112.1 61 80.3
ClCG07G012690 Citrullus lanatus HOM05D000533 ORTHO05D001069 6.3e-22 107.1 57 80.7
Nitab4.5_0006409g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 6.3e-22 107.1 64 76.6
Mapoly0048s0044 Marchantia polymorpha HOM05D000533 ORTHO05D001069 1.1e-21 106.3 53 86.8
Peaxi162Scf00080g00525 Petunia axillaris HOM05D000533 ORTHO05D001069 9.0e-21 103.2 59 76.3
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 1.1e-18 96.3 69 63.8
Medtr1g051590 Medicago truncatula HOM05D000533 ORTHO05D001069 4.2e-18 94.4 55 76.4
Solyc01g011410.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 5.5e-18 94.0 50 82.0
EL10Ac8g19820 Beta vulgaris HOM05D000533 ORTHO05D001069 7.9e-17 90.1 46 87.0
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.8e-16 89.0 50 76.0
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 3.9e-16 87.8 63 66.7
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 1.1e-15 86.3 45 84.4
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.3e-15 84.7 48 79.2
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.3e-14 82.8 45 82.2
Nitab4.5_0001783g0050 Nicotiana tabacum HOM05D000388 ORTHO05D000473 4.1e-13 77.8 47 78.7
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 9.1e-13 76.6 44 72.7
Nn1g00561 Nelumbo nucifera HOM05D000533 ORTHO05D001069 1.5e-12 75.9 48 68.8
Nitab4.5_0001313g0080 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.6e-12 75.1 71 57.7
Psat7g199400 Pisum sativum HOM05D000533 ORTHO05D001069 2.6e-12 75.1 37 83.8
Lsat_1_v5_gn_4_118061 Lactuca sativa HOM05D000533 ORTHO05D001069 2.9e-11 71.6 40 80.0
Eucgr.B00847 Eucalyptus grandis HOM05D000533 ORTHO05D001069 7.2e-10 67.0 39 71.8
Glyma.18G155701 Glycine max HOM05D000533 ORTHO05D001069 2.1e-09 65.5 33 87.9
Solyc11g021237.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.6e-09 64.7 33 87.9
TPR.G15418 Trifolium pratense HOM05D000533 ORTHO05D001069 3.6e-09 64.7 34 85.3
Ca_29118_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 6.1e-09 63.9 71 45.1
RcHm_v2.0_Chr3g0470811 Rosa chinensis HOM05D000533 ORTHO05D001069 3.0e-08 61.6 33 81.8
BolSC35t60688H Brassica oleracea HOM05D000533 ORTHO05D001069 6.7e-08 60.5 31 80.6
Medtr6g011030 Medicago truncatula HOM05D000533 ORTHO05D001069 1.1e-07 59.7 40 72.5
BolC9t56921H Brassica oleracea HOM05D000533 ORTHO05D001069 2.6e-07 58.5 29 82.8
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 2.6e-07 58.5 70 35.7
Medtr1g041540 Medicago truncatula HOM05D000533 ORTHO05D001069 3.3e-07 58.2 32 81.2
Oeu035377.1 Olea europaea HOM05D000533 ORTHO05D001069 3.7e-06 54.7 36 69.4
Aqoxy84s002 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 8.2e-06 53.5 67 38.8
Solyc02g011810.3 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.2e-06 53.5 42 66.7


User provided reference genes

Program Settings