Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g085100 Medicago truncatula HOM05D001200 ORTHO05D002731 9.3e-30 132.9 67 100.0
Medtr2g048620 Medicago truncatula HOM05D001200 ORTHO05D002731 2.3e-20 101.7 58 84.5
Medtr1g081540 Medicago truncatula HOM05D001200 ORTHO05D002731 1.1e-19 99.4 52 92.3
Medtr3g082380 Medicago truncatula HOM05D001200 ORTHO05D002731 6.2e-18 93.6 53 86.8
Medtr7g108460 Medicago truncatula HOM05D001200 ORTHO05D002731 4.5e-16 87.4 51 82.4
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 3.8e-15 84.3 54 77.8
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 1.9e-14 82.0 54 75.9
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 1.9e-14 82.0 54 75.9
Medtr7g075220 Medicago truncatula HOM05D000504 ORTHO05D002731 2.4e-14 81.6 51 76.5
Medtr7g086590 Medicago truncatula HOM05D001200 ORTHO05D002731 2.1e-13 78.6 43 86.0
Medtr3g073110 Medicago truncatula HOM05D001200 ORTHO05D002731 4.6e-13 77.4 49 77.6
Medtr4g080900 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-12 75.5 47 78.7
Medtr3g071600 Medicago truncatula HOM05D001200 ORTHO05D002731 3.0e-12 74.7 53 71.7
Medtr3g008330 Medicago truncatula HOM05D001200 ORTHO05D002731 8.7e-12 73.2 44 75.0
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 1.1e-11 72.8 47 72.3
Medtr7g012690 Medicago truncatula HOM05D001200 ORTHO05D002731 2.5e-11 71.6 38 86.8
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 4.3e-11 70.9 46 76.1
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-11 70.5 53 62.3
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 5.6e-11 70.5 54 64.8
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 7.4e-11 70.1 50 66.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
HanXRQChr08g0211971 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 9.6e-11 69.7 54 63.0
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 1.3e-10 69.3 54 66.7
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.3e-10 69.3 54 66.7
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 1.3e-10 69.3 54 63.0
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 1.3e-10 69.3 46 71.7
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 1.6e-10 68.9 54 64.8
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.6e-10 68.9 54 66.7
Lalb_Chr23g0274791 Lupinus albus HOM05D001200 ORTHO05D002731 1.6e-10 68.9 54 66.7
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.6e-10 68.9 54 63.0
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 2.1e-10 68.6 54 64.8
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 2.8e-10 68.2 54 63.0
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 2.8e-10 68.2 54 63.0
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 2.8e-10 68.2 54 63.0
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
BolSC29t60544H Brassica oleracea HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
Ciclev10010880m.g Citrus clementina HOM05D001200 ORTHO05D002731 4.8e-10 67.4 54 63.0
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 63.0
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 63.0
BolSC44t60820H Brassica oleracea HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 63.0
BolSC46t60960H Brassica oleracea HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 63.0
BolSC47t61066H Brassica oleracea HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 63.0
Medtr2g103350 Medicago truncatula HOM05D001200 ORTHO05D002731 6.2e-10 67.0 39 84.6
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 6.2e-10 67.0 54 64.8
BraSC59t46528Z Brassica rapa HOM05D001200 ORTHO05D002731 8.2e-10 66.6 61 59.0
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 8.2e-10 66.6 54 64.8
RcHm_v2.0_CPg0502801 Rosa chinensis HOM05D001200 ORTHO05D002731 8.2e-10 66.6 54 64.8
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 1.1e-09 66.2 46 69.6
BolC2t08908H Brassica oleracea HOM05D001200 ORTHO05D002731 1.1e-09 66.2 54 61.1
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 1.1e-09 66.2 54 61.1
Ciclev10013969m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-09 66.2 46 69.6
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-09 66.2 46 69.6
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 1.1e-09 66.2 46 69.6
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 1.1e-09 66.2 46 69.6
CsaV3_UNG210140 Cucumis sativus L. HOM05D001200 ORTHO05D002731 1.4e-09 65.9 51 66.7
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.4e-09 65.9 51 60.8
Medtr4g106580 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-09 65.5 42 78.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.4e-09 65.1 54 63.0
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 2.4e-09 65.1 54 63.0
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 3.1e-09 64.7 48 64.6
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 3.1e-09 64.7 54 59.3
Medtr2g102090 Medicago truncatula HOM05D001200 ORTHO05D002731 6.9e-09 63.5 33 87.9
Medtr7g045000 Medicago truncatula HOM05D001200 ORTHO05D261551 6.9e-09 63.5 33 87.9
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 1.2e-08 62.8 48 64.6
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 1.2e-08 62.8 42 69.0
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 1.5e-08 62.4 56 57.1
CSS0038532 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 2.0e-08 62.0 46 67.4
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 2.0e-08 62.0 44 65.9
CSS0005564 Camellia sinensis var. sinensis HOM05D001200 ORTHO05D002731 4.5e-08 60.8 46 65.2
Hund08793 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund12716 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund12843 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund23968 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund27631 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund27678 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund27755 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund27831 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28438 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28448 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28536 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28587 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28596 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28613 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28850 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28880 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28937 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28946 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28951 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28954 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28961 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28974 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund28979 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29026 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29089 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29109 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29179 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29186 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29244 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29247 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29251 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29254 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29261 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29273 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29277 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29281 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29285 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29288 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29316 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29434 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29438 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29453 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29499 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29654 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29713 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29755 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29814 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund29818 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30036 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30039 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30120 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30177 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30365 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Hund30388 Selenicereus undatus HOM05D001200 ORTHO05D002731 4.5e-08 60.8 53 56.6
Pp3c2_10430 Physcomitrium patens HOM05D001200 ORTHO05D002731 6.5e-07 57.0 44 54.5
Medtr5g089040 Medicago truncatula HOM05D001200 ORTHO05D002731 8.4e-07 56.6 33 81.8
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 1.4e-06 55.8 33 75.8
Medtr2g042860 Medicago truncatula HOM05D001200 ORTHO05D002731 1.9e-06 55.5 33 78.8
Ciclev10006660m.g Citrus clementina HOM05D001200 ORTHO05D002731 2.5e-06 55.1 40 67.5
Medtr3g109440 Medicago truncatula HOM05D001200 ORTHO05D002731 3.2e-06 54.7 27 88.9


User provided reference genes

Program Settings