Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g064190 Medicago truncatula HOM05D000104 ORTHO05D266340 2.3e-63 245.4 122 100.0
arahy.Tifrunner.gnm1.ann1.EUAM8L Arachis hypogaea HOM05D000104 ORTHO05D005891 2.4e-12 75.9 92 51.1
arahy.Tifrunner.gnm1.ann1.JJI54I Arachis hypogaea HOM05D000104 ORTHO05D005891 2.4e-12 75.9 92 51.1
TPR.G19660 Trifolium pratense HOM05D000104 ORTHO05D005891 3.5e-11 72.0 92 48.9
Lalb_Chr01g0017271 Lupinus albus HOM05D000104 ORTHO05D005891 4.6e-11 71.6 72 58.3
Ca_12259_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005891 6.0e-11 71.2 43 81.4
Psat6g121600 Pisum sativum HOM05D000104 ORTHO05D005891 7.9e-11 70.9 43 81.4
Glyma.03G133700 Glycine max HOM05D000104 ORTHO05D005891 1.3e-10 70.1 65 63.1
Glyma.19G136000 Glycine max HOM05D000104 ORTHO05D005891 1.3e-10 70.1 65 63.1
Sed0023310 Sechium edule HOM05D000104 ORTHO05D005891 1.1e-09 67.0 87 47.1
TPR.G18256 Trifolium pratense HOM05D000104 ORTHO05D005891 7.4e-09 64.3 67 59.7
ClCG04G003710 Citrullus lanatus HOM05D000104 ORTHO05D005891 1.3e-08 63.5 64 59.4
TWI74G1174 Tripterygium wilfordii HOM05D000104 ORTHO05D005891 1.3e-08 63.5 62 58.1
VMungo1383G1381 Vigna mungo HOM05D000104 ORTHO05D005891 1.3e-08 63.5 64 57.8
Lj1g0026239 Lotus japonicus HOM05D000104 ORTHO05D005891 1.6e-08 63.2 43 72.1
Phvul.001G129200 Phaseolus vulgaris HOM05D000104 ORTHO05D005891 1.6e-08 63.2 43 72.1
Thecc.05G148000 Theobroma cacao HOM05D000104 ORTHO05D005891 6.2e-08 61.2 64 56.2
Lalb_Chr25g0287091 Lupinus albus HOM05D000104 ORTHO05D005891 8.1e-08 60.8 64 57.8
CsaV3_4G027520 Cucumis sativus L. HOM05D000104 ORTHO05D005891 1.1e-07 60.5 41 73.2
Eucgr.A02310 Eucalyptus grandis HOM05D000104 ORTHO05D005891 1.1e-07 60.5 84 46.4
Atru.chr1.1229 Acer truncatum HOM05D000104 ORTHO05D005891 1.4e-07 60.1 43 69.8
Glyma.10G106500 Glycine max HOM05D000104 ORTHO05D005891 1.4e-07 60.1 43 67.4
Haze_19788 Corylus avellana HOM05D000104 ORTHO05D005891 2.4e-07 59.3 51 60.8
Haze_19790 Corylus avellana HOM05D000104 ORTHO05D005891 2.4e-07 59.3 51 60.8
MELO3C026332.2 Cucumis melo HOM05D000104 ORTHO05D005891 2.4e-07 59.3 41 73.2
Potri.016G043500 Populus trichocarpa HOM05D000104 ORTHO05D005891 2.4e-07 59.3 64 53.1
Cfa016778 Carpinus fangiana HOM05D000104 ORTHO05D005891 3.1e-07 58.9 51 60.8
Duzib106G2014 Durio zibethinus HOM05D000104 ORTHO05D005891 3.1e-07 58.9 61 57.4
Lalb_Chr21g0316591 Lupinus albus HOM05D000104 ORTHO05D005891 3.1e-07 58.9 43 72.1
arahy.Tifrunner.gnm1.ann1.NU01L9 Arachis hypogaea HOM05D000104 ORTHO05D005891 6.9e-07 57.8 43 69.8
QL07p003748 Quercus lobata HOM05D000104 ORTHO05D005891 6.9e-07 57.8 51 58.8
arahy.Tifrunner.gnm1.ann1.KD6P16 Arachis hypogaea HOM05D000104 ORTHO05D005891 9.0e-07 57.4 43 69.8
Dinv39659 Davidia involucrata HOM05D000104 ORTHO05D005891 1.2e-06 57.0 47 59.6
Gohir.A09G121000 Gossypium hirsutum HOM05D000104 ORTHO05D005891 1.2e-06 57.0 43 65.1
Gorai.006G135500 Gossypium raimondii HOM05D000104 ORTHO05D005891 1.2e-06 57.0 43 65.1
Manes.09G018100 Manihot esculenta HOM05D000104 ORTHO05D005891 1.2e-06 57.0 51 58.8
Carub.0001s3808 Capsella rubella HOM05D000104 ORTHO05D005891 1.5e-06 56.6 76 46.1
Psat3g074520 Pisum sativum HOM05D000104 ORTHO05D005891 1.5e-06 56.6 46 65.2
C08p32710 Brassica napus HOM05D000104 ORTHO05D005891 2.0e-06 56.2 67 47.8
BolC8t50882H Brassica oleracea HOM05D000104 ORTHO05D005891 2.0e-06 56.2 67 47.8
CiPaw.10G035500 Carya illinoinensis HOM05D000104 ORTHO05D005891 2.0e-06 56.2 50 60.0
THA.LOC104801997 Tarenaya hassleriana HOM05D000104 ORTHO05D005891 2.0e-06 56.2 68 50.0
TWI53G0966 Tripterygium wilfordii HOM05D000104 ORTHO05D005891 2.0e-06 56.2 41 68.3
CARHR167500 Cardamine hirsuta HOM05D000104 ORTHO05D005891 2.6e-06 55.8 90 41.1
CiPaw.09G040400 Carya illinoinensis HOM05D000104 ORTHO05D005891 3.4e-06 55.5 51 58.8
Medtr7g090960 Medicago truncatula HOM05D000104 ORTHO05D005891 3.4e-06 55.5 46 63.0
Ca_08427_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005891 4.5e-06 55.1 46 63.0
Dinv18670 Davidia involucrata HOM05D000104 ORTHO05D005891 5.8e-06 54.7 51 52.9
Gohir.D09G117100 Gossypium hirsutum HOM05D000104 ORTHO05D005891 5.8e-06 54.7 42 64.3
Sed0002389 Sechium edule HOM05D000104 ORTHO05D005891 5.8e-06 54.7 40 67.5
A04p03200 Brassica napus HOM05D000104 ORTHO05D005891 7.6e-06 54.3 76 44.7
BraA04t16042Z Brassica rapa HOM05D000104 ORTHO05D005891 7.6e-06 54.3 76 44.7
Ciclev10004142m.g Citrus clementina HOM05D000104 ORTHO05D005891 7.6e-06 54.3 43 62.8
Aa31LG10G12170 Aethionema arabicum HOM05D000104 ORTHO05D005891 1.0e-05 53.9 67 49.3


User provided reference genes

Program Settings