Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g040395 Medicago truncatula HOM05D008718 ORTHO05D010957 1.2e-85 319.7 156 100.0
Medtr1g056190 Medicago truncatula HOM05D008718 ORTHO05D010957 4.2e-17 92.0 67 65.7
Medtr4g064720 Medicago truncatula HOM05D008718 ORTHO05D010957 9.4e-17 90.9 67 64.2
Medtr5g080880 Medicago truncatula HOM05D001009 ORTHO05D000829 6.3e-13 78.2 66 56.1
Medtr6g024185 Medicago truncatula HOM05D007995 ORTHO05D001819 1.8e-12 76.6 115 42.6
Medtr7g059235 Medicago truncatula HOM05D008718 ORTHO05D010957 7.0e-12 74.7 117 35.0
TPR.G2407 Trifolium pratense HOM05D008718 ORTHO05D010957 2.6e-11 72.8 67 56.7
Medtr3g040090 Medicago truncatula HOM05D002112 ORTHO05D005830 2.9e-10 69.3 124 34.7
Medtr7g052220 Medicago truncatula HOM05D008718 ORTHO05D010957 3.8e-10 68.9 67 49.3
Medtr4g052790 Medicago truncatula HOM05D008718 ORTHO05D010957 5.5e-09 65.1 45 62.2
COL.COLO4_30280 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.0e-07 60.8 109 35.8
Hma1.2p1_0333F.1_g128210 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-07 60.8 66 45.5
Hma1.2p1_3263F.1_g334663 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-07 60.8 66 45.5
Hma1.2p1_3263F.1_g334666 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 1.0e-07 60.8 66 45.5
Medtr1g009970 Medicago truncatula HOM05D008161 ORTHO05D010957 4.0e-07 58.9 54 51.9
COL.COLO4_01560 Corchorus olitorius HOM05D022577 ORTHO05D010957 5.2e-07 58.5 63 44.4
COL.COLO4_02464 Corchorus olitorius HOM05D022577 ORTHO05D010957 5.2e-07 58.5 63 44.4
COL.COLO4_03155 Corchorus olitorius HOM05D022577 ORTHO05D010957 5.2e-07 58.5 63 44.4
COL.COLO4_03198 Corchorus olitorius HOM05D022577 ORTHO05D010957 5.2e-07 58.5 63 44.4
Lj9P217T13 Lonicera japonica HOM05D000003 ORTHO05D000022 5.2e-07 58.5 76 42.1
vmacro08191 Vaccinium macrocarpon HOM05D000548 ORTHO05D000987 1.2e-06 57.4 62 43.5
arahy.Tifrunner.gnm1.ann1.WYFF13 Arachis hypogaea HOM05D000155 ORTHO05D000022 2.0e-06 56.6 49 51.0
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-06 56.6 73 42.5
CSS0049818 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.0e-06 56.6 90 40.0
COL.COLO4_00348 Corchorus olitorius HOM05D000003 ORTHO05D025138 2.6e-06 56.2 90 38.9
TPR.G33526 Trifolium pratense HOM05D000155 ORTHO05D000022 2.6e-06 56.2 67 44.8
Medtr1g018515 Medicago truncatula HOM05D008718 ORTHO05D010957 3.3e-06 55.8 47 51.1
Medtr2g086830 Medicago truncatula HOM05D008718 ORTHO05D010957 3.3e-06 55.8 59 45.8
arahy.Tifrunner.gnm1.ann1.3ZGA1D Arachis hypogaea HOM05D000155 ORTHO05D000022 4.4e-06 55.5 51 51.0
Medtr8g045220 Medicago truncatula HOM05D007838 ORTHO05D010957 4.4e-06 55.5 68 42.6
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.7e-06 55.1 73 41.1
Medtr4g051668 Medicago truncatula HOM05D014162 ORTHO05D016238 5.7e-06 55.1 45 51.1
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.5e-06 54.7 73 41.1
SHI15778 Sapria himalayana HOM05D004990 ORTHO05D000022 9.7e-06 54.3 83 41.0
TPR.G10331 Trifolium pratense HOM05D008718 ORTHO05D000022 9.7e-06 54.3 54 48.1


User provided reference genes

Program Settings