Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g033930 Medicago truncatula HOM05D014499 ORTHO05D016229 5.9e-59 230.7 121 100.0
Medtr1g033790 Medicago truncatula HOM05D014499 ORTHO05D016229 5.0e-50 201.1 121 88.4
Medtr1g033370 Medicago truncatula HOM05D014499 ORTHO05D016229 2.3e-39 165.6 121 76.0
Psat6g130760 Pisum sativum HOM05D014499 ORTHO05D016229 1.2e-16 90.1 102 50.0
Psat6g095800 Pisum sativum HOM05D014499 ORTHO05D016229 2.8e-16 89.0 115 44.3
Psat0s1986g0040 Pisum sativum HOM05D014499 ORTHO05D016229 4.7e-16 88.2 102 49.0
Ca_10447_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 1.2e-14 83.6 94 51.1
Medtr1g084950 Medicago truncatula HOM05D000307 ORTHO05D000166 2.4e-12 75.9 93 45.2
TPR.G18737 Trifolium pratense HOM05D014499 ORTHO05D016229 4.1e-12 75.1 101 47.5
Medtr5g047580 Medicago truncatula HOM05D000307 ORTHO05D000166 7.1e-12 74.3 93 46.2
Psat6g172880 Pisum sativum HOM05D000307 ORTHO05D000166 7.1e-12 74.3 94 46.8
Psat6g095840 Pisum sativum HOM05D014499 ORTHO05D016229 9.2e-12 73.9 106 41.5
TPR.G31436 Trifolium pratense HOM05D000307 ORTHO05D000166 2.7e-11 72.4 97 43.3
Ca_10207_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 4.6e-11 71.6 90 46.7
Medtr1g090697 Medicago truncatula HOM05D000307 ORTHO05D000166 6.0e-11 71.2 94 46.8
TPR.G34895 Trifolium pratense HOM05D000307 ORTHO05D000166 7.8e-11 70.9 94 43.6
Medtr1g077320 Medicago truncatula HOM05D000307 ORTHO05D000166 1.7e-10 69.7 99 41.4
TPR.G37817 Trifolium pratense HOM05D000307 ORTHO05D000166 1.7e-10 69.7 94 46.8
TPR.G37782 Trifolium pratense HOM05D000307 ORTHO05D000166 2.3e-10 69.3 96 42.7
Ca_12469_v3 Cicer arietinum L. HOM05D014499 ORTHO05D016229 3.9e-10 68.6 111 38.7
Medtr7g011950 Medicago truncatula HOM05D000307 ORTHO05D000166 3.9e-10 68.6 99 41.4
TPR.G11133 Trifolium pratense HOM05D014499 ORTHO05D016229 6.6e-10 67.8 114 38.6
Medtr4g028720 Medicago truncatula HOM05D000307 ORTHO05D000166 2.5e-09 65.9 99 40.4
Lj5g0013862 Lotus japonicus HOM05D000307 ORTHO05D000166 3.3e-09 65.5 89 44.9
TPR.G19679 Trifolium pratense HOM05D000307 ORTHO05D000166 3.3e-09 65.5 97 38.1
Medtr1g090783 Medicago truncatula HOM05D000307 ORTHO05D000166 4.3e-09 65.1 93 41.9
Medtr5g047560 Medicago truncatula HOM05D000307 ORTHO05D000166 7.3e-09 64.3 93 43.0
Psat6g156920 Pisum sativum HOM05D000307 ORTHO05D000166 9.5e-09 63.9 90 41.1
Glyma.10G142900 Glycine max HOM05D000307 ORTHO05D000166 3.6e-08 62.0 90 38.9
Lalb_Chr21g0310031 Lupinus albus HOM05D000307 ORTHO05D000166 3.6e-08 62.0 95 36.8
Ca_12462_v3 Cicer arietinum L. HOM05D000307 ORTHO05D016229 6.2e-08 61.2 103 36.9
Lj6g0013084 Lotus japonicus HOM05D000307 ORTHO05D000166 6.2e-08 61.2 77 41.6
Medtr1g077390 Medicago truncatula HOM05D000307 ORTHO05D000166 8.1e-08 60.8 94 37.2
Lj4g0012393 Lotus japonicus HOM05D000307 ORTHO05D000166 1.1e-07 60.5 77 42.9
ECA232G4799 Erigeron canadensis HOM05D000307 ORTHO05D000166 1.8e-07 59.7 77 44.2
Lj4g0004882 Lotus japonicus HOM05D000307 ORTHO05D000166 2.3e-07 59.3 85 38.8
Lj4g0012176 Lotus japonicus HOM05D000307 ORTHO05D000166 2.3e-07 59.3 85 38.8
Lj4g0018608 Lotus japonicus HOM05D000307 ORTHO05D000166 2.3e-07 59.3 85 38.8
Lj4g0023178 Lotus japonicus HOM05D000307 ORTHO05D000166 2.3e-07 59.3 83 38.6
Lj4g0025943 Lotus japonicus HOM05D000307 ORTHO05D000166 2.3e-07 59.3 85 38.8
Medtr1g090710 Medicago truncatula HOM05D000307 ORTHO05D000166 2.3e-07 59.3 94 39.4
Psat5g149040 Pisum sativum HOM05D000307 ORTHO05D000166 2.3e-07 59.3 72 38.9
Potri.005G002400 Populus trichocarpa HOM05D000307 ORTHO05D000166 2.3e-07 59.3 76 42.1
TPR.G7598 Trifolium pratense HOM05D000307 ORTHO05D000166 2.3e-07 59.3 94 35.1
Lj4g0013065 Lotus japonicus HOM05D000307 ORTHO05D000166 3.1e-07 58.9 79 41.8
AT5G26630 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 4.0e-07 58.5 102 33.3
Lj4g0006124 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 79 41.8
Lj4g0006740 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 77 41.6
Lj4g0007237 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 79 41.8
Lj4g0021048 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 79 41.8
Lj4g0021083 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 82 39.0
Lj4g0024546 Lotus japonicus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 79 41.8
Lalb_Chr02g0147511 Lupinus albus HOM05D000307 ORTHO05D000166 4.0e-07 58.5 94 35.1
VMungo0720G2131 Vigna mungo HOM05D000307 ORTHO05D000166 4.0e-07 58.5 94 34.0
Lj4g0017653 Lotus japonicus HOM05D000307 ORTHO05D000166 5.2e-07 58.2 76 42.1
Lj6g0002018 Lotus japonicus HOM05D000307 ORTHO05D000166 5.2e-07 58.2 85 40.0
VMungo0720G2095 Vigna mungo HOM05D000307 ORTHO05D000166 5.2e-07 58.2 94 37.2
CDE11G0692 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 6.8e-07 57.8 97 36.1
Lj6g0013413 Lotus japonicus HOM05D000307 ORTHO05D000166 6.8e-07 57.8 85 38.8
Lj6g0024616 Lotus japonicus HOM05D000307 ORTHO05D000166 6.8e-07 57.8 77 39.0
Lalb_Chr15g0085891 Lupinus albus HOM05D000307 ORTHO05D000166 6.8e-07 57.8 70 40.0
Oeu062795.1 Olea europaea HOM05D000307 ORTHO05D000166 8.9e-07 57.4 77 44.2
Phvul.007G205700 Phaseolus vulgaris HOM05D000307 ORTHO05D000166 8.9e-07 57.4 94 37.2
DCAR_017625 Daucus carota HOM05D000307 ORTHO05D000166 1.2e-06 57.0 75 44.0
MD08G1200100 Malus domestica HOM05D000307 ORTHO05D000166 1.2e-06 57.0 78 39.7
arahy.Tifrunner.gnm1.ann1.TW1RKA Arachis hypogaea HOM05D000307 ORTHO05D000166 2.0e-06 56.2 82 42.7
Lj6g0006298 Lotus japonicus HOM05D000307 ORTHO05D000166 2.0e-06 56.2 85 38.8
CDE05G1214 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 2.6e-06 55.8 97 35.1
Lj6g0016185 Lotus japonicus HOM05D000307 ORTHO05D000166 2.6e-06 55.8 85 37.6
Lalb_Chr15g0086371 Lupinus albus HOM05D000307 ORTHO05D000166 2.6e-06 55.8 70 38.6
Psat7g120000 Pisum sativum HOM05D000307 ORTHO05D000166 2.6e-06 55.8 77 39.0
Lj3g0000804 Lotus japonicus HOM05D000307 ORTHO05D000166 3.4e-06 55.5 117 35.0
Carub.0194s0001 Capsella rubella HOM05D000307 ORTHO05D000166 4.4e-06 55.1 103 32.0
CDE05G0068 Ceratophyllum demersum HOM05D000307 ORTHO05D000166 4.4e-06 55.1 77 39.0
Ca_15048_v3 Cicer arietinum L. HOM05D000307 ORTHO05D000166 7.6e-06 54.3 72 36.1
ECA246G5209 Erigeron canadensis HOM05D000307 ORTHO05D000166 7.6e-06 54.3 77 40.3
HanXRQChr02g0058811 Helianthus annuus HOM05D000307 ORTHO05D000166 7.6e-06 54.3 76 39.5
HanXRQChr10g0296361 Helianthus annuus HOM05D000307 ORTHO05D000166 7.6e-06 54.3 76 39.5
HanXRQChr15g0479321 Helianthus annuus HOM05D000307 ORTHO05D000166 7.6e-06 54.3 76 39.5
Lalb_Chr02g0148031 Lupinus albus HOM05D000307 ORTHO05D000166 7.6e-06 54.3 77 37.7
Medtr2g035590 Medicago truncatula HOM05D000307 ORTHO05D000166 7.6e-06 54.3 77 31.2
Sc17g0006780 Simmondsia chinensis HOM05D000307 ORTHO05D000166 7.6e-06 54.3 76 36.8
HanXRQChr15g0479311 Helianthus annuus HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 39.5
Nitab4.5_0000001g0130 Nicotiana tabacum HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 43.4
Nitab4.5_0000001g0140 Nicotiana tabacum HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 43.4
Nitab4.5_0000009g0060 Nicotiana tabacum HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 43.4
Peaxi162Scf00194g00005 Petunia axillaris HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 44.7
Peaxi162Scf00222g00046 Petunia axillaris HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 44.7
Peaxi162Scf00222g00424 Petunia axillaris HOM05D000307 ORTHO05D000166 9.9e-06 53.9 76 44.7


User provided reference genes

Program Settings