Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 8.8e-145 516.9 258 100.0
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 4.3e-75 285.4 196 76.5
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 1.3e-74 283.9 158 89.2
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 2.0e-72 276.6 196 74.5
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 2.6e-72 276.2 195 73.8
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 3.8e-71 272.3 196 73.5
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 4.9e-63 245.4 159 75.5
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 3.5e-61 239.2 162 72.2
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 2.3e-60 236.5 162 71.6
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 1.5e-59 233.8 158 70.9
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 3.7e-50 202.6 150 66.0
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 3.7e-50 202.6 150 66.0
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 1.9e-46 190.3 165 54.5
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 4.2e-46 189.1 150 60.7
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 5.5e-46 188.7 151 60.3
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 2.1e-45 186.8 150 61.3
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 6.1e-45 185.3 152 57.9
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 1.8e-44 183.7 155 56.8
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 5.1e-44 182.2 118 77.1
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 6.7e-44 181.8 190 50.0
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 4.3e-43 179.1 165 54.5
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 9.7e-43 177.9 150 56.0
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.3e-42 177.6 154 57.1
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 6.3e-42 175.3 151 55.6
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 8.2e-42 174.9 150 55.3
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 1.1e-41 174.5 154 55.2
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 1.4e-41 174.1 185 50.3
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 5.9e-40 168.7 152 51.3
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 2.9e-39 166.4 150 56.0
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 3.8e-39 166.0 132 60.6
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 3.8e-39 166.0 153 52.3
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 3.8e-39 166.0 150 56.0
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 3.8e-39 166.0 153 51.6
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 3.8e-39 166.0 154 53.9
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 6.5e-39 165.2 154 53.9
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.4e-38 164.1 149 57.0
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 2.5e-38 163.3 151 55.6
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 3.2e-38 162.9 154 55.8
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 3.2e-38 162.9 152 50.7
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 4.2e-38 162.5 154 55.8
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.2e-37 161.0 153 51.0
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 1.6e-37 160.6 154 53.2
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.1e-37 160.2 153 49.7
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 4.6e-37 159.1 164 49.4
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 4.6e-37 159.1 188 47.3
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 6.1e-37 158.7 153 49.7
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 1.0e-36 157.9 154 52.6
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 3.9e-36 156.0 154 51.9
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 5.1e-36 155.6 156 51.3
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 6.7e-36 155.2 154 51.9
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 6.7e-36 155.2 182 45.6
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 8.8e-36 154.8 153 49.7
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 2.0e-35 153.7 137 57.7
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 2.0e-35 153.7 185 42.2
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 2.5e-35 153.3 154 50.6
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 2.5e-35 153.3 154 50.6
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 2.5e-35 153.3 154 50.6
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 4.3e-35 152.5 150 46.7
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 4.3e-35 152.5 185 43.2
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 5.7e-35 152.1 150 50.0
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 5.7e-35 152.1 150 50.7
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 5.7e-35 152.1 150 50.7
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 2.2e-34 150.2 131 53.4
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 2.2e-34 150.2 149 50.3
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 3.7e-34 149.4 150 49.3
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 1.4e-33 147.5 150 50.0
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 4.1e-33 146.0 153 49.0
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 5.3e-33 145.6 121 57.0
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 6.9e-33 145.2 160 48.1
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 9.1e-33 144.8 136 51.5
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 5.9e-32 142.1 151 48.3
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 1.1e-30 137.9 150 47.3
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 1.1e-30 137.9 153 47.1
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 1.4e-30 137.5 121 54.5
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 1.6e-29 134.0 149 47.7
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 4.7e-29 132.5 113 57.5
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 4.7e-29 132.5 154 44.2
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-28 131.3 128 53.1
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 1.0e-28 131.3 128 53.1
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 3.0e-28 129.8 147 41.5
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 3.0e-28 129.8 147 42.2
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 3.9e-28 129.4 118 56.8
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 6.7e-28 128.6 176 39.8
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 3.3e-27 126.3 150 44.0
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 7.4e-27 125.2 125 47.2
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 1.4e-25 120.9 122 50.8
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 5.3e-25 119.0 111 52.3
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 1.6e-24 117.5 145 45.5
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 7.7e-24 115.2 111 53.2
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 1.7e-23 114.0 185 36.2
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 1.4e-20 104.4 106 42.5
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 7.5e-19 98.6 102 47.1
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 9.7e-19 98.2 125 44.0
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 1.7e-18 97.4 99 46.5
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 6.3e-18 95.5 107 48.6
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 4.5e-16 89.4 92 46.7
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 2.9e-15 86.7 93 45.2
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 3.6e-13 79.7 96 43.8
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 4.4e-11 72.8 110 40.0


User provided reference genes

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