Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 1.9e-234 815.5 418 100.0
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 2.9e-206 721.8 424 88.9
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.6e-196 689.5 430 84.2
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.4e-192 675.6 421 83.6
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 1.7e-166 589.7 428 75.9
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 1.5e-165 586.6 412 76.0
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.1e-160 570.5 424 74.1
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 5.4e-160 568.2 422 73.0
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 3.5e-159 565.5 424 71.9
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 1.7e-158 563.1 427 73.8
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 2.1e-156 556.2 347 81.6
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.4e-155 553.5 347 81.3
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 2.0e-138 496.5 377 67.6
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 4.9e-137 491.9 414 64.7
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 6.0e-135 485.0 406 64.3
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 6.0e-135 485.0 377 68.4
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 2.3e-134 483.0 382 66.8
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.9e-134 482.3 366 69.7
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 8.6e-134 481.1 366 69.4
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 1.1e-133 480.7 381 66.4
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 1.5e-133 480.3 371 66.3
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 1.5e-133 480.3 413 63.0
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 4.3e-133 478.8 375 65.6
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 2.1e-132 476.5 371 67.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 2.8e-132 476.1 451 59.4
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 6.2e-132 474.9 366 69.1
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 6.9e-131 471.5 382 66.2
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 1.5e-130 470.3 371 65.2
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 5.8e-130 468.4 427 61.4
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.7e-129 466.8 382 64.1
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.7e-129 466.8 364 65.1
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 2.9e-129 466.1 397 63.7
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 6.4e-129 464.9 342 69.3
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 1.4e-128 463.8 429 59.0
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 4.2e-128 462.2 355 67.6
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 1.2e-127 460.7 424 60.8
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 3.5e-127 459.1 376 64.4
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 3.5e-127 459.1 378 64.3
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 6.0e-127 458.4 436 58.3
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 6.0e-127 458.4 343 70.0
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 7.8e-127 458.0 377 64.2
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 3.0e-126 456.1 344 68.9
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 3.9e-126 455.7 436 58.3
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 6.6e-126 454.9 364 65.9
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 8.7e-126 454.5 436 58.3
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 1.9e-125 453.4 398 60.6
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.6e-125 451.8 438 58.0
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 7.3e-125 451.4 377 63.4
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.3e-124 450.7 344 67.7
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 1.6e-124 450.3 375 63.2
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 2.1e-124 449.9 377 62.3
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 2.1e-124 449.9 371 63.9
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 2.8e-124 449.5 386 63.7
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 3.6e-124 449.1 381 63.5
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 8.1e-124 448.0 369 63.1
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 1.1e-123 447.6 394 61.9
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 4.0e-123 445.7 364 62.9
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 6.9e-123 444.9 382 61.5
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 6.9e-123 444.9 426 58.0
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.2e-122 444.1 376 62.5
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.4e-122 442.6 375 62.4
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 4.5e-122 442.2 345 67.8
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 5.8e-122 441.8 430 57.4
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 7.6e-122 441.4 376 62.8
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 7.6e-122 441.4 399 59.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.3e-121 440.7 344 65.4
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.7e-121 440.3 414 60.1
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.2e-121 439.9 370 62.4
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.1e-120 437.6 344 65.1
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 1.9e-120 436.8 383 61.6
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 9.3e-120 434.5 423 55.8
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 1.2e-119 434.1 330 67.9
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.6e-119 433.7 449 55.0
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 4.6e-119 432.2 308 70.5
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 1.0e-118 431.0 424 57.8
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 5.1e-118 428.7 334 66.8
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.5e-117 427.2 338 63.9
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 1.5e-117 427.2 367 58.0
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.9e-117 426.8 363 61.4
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.3e-117 426.0 340 66.8
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 5.6e-117 425.2 407 56.0
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 7.4e-117 424.9 340 64.7
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 9.6e-117 424.5 353 62.0
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 4.8e-116 422.2 377 59.4
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 5.3e-115 418.7 377 60.5
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 6.9e-115 418.3 377 61.0
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 1.7e-113 413.7 366 60.4
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 2.2e-113 413.3 261 81.2
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 6.4e-113 411.8 390 58.7
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 1.9e-112 410.2 337 61.4
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.6e-111 407.1 382 58.1
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 5.6e-109 398.7 366 59.6
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 6.9e-99 365.2 294 63.9
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 5.9e-98 362.1 241 76.3
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 7.4e-93 345.1 438 49.3
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 6.5e-89 332.0 386 51.8
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 1.0e-86 324.7 363 51.5
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 2.3e-86 323.6 406 46.1
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 7.4e-85 318.5 230 72.2
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 2.2e-81 307.0 213 74.2
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.9e-72 277.3 203 70.0
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 3.2e-72 276.6 210 71.0
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 4.0e-70 269.6 340 44.1
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 6.7e-70 268.9 341 43.4
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 5.3e-67 259.2 343 46.4
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.8e-57 226.5 342 40.1
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 5.2e-54 216.1 223 51.6
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 7.0e-43 179.1 187 51.3
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 3.0e-33 147.1 102 74.5
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 9.5e-32 142.1 178 46.6
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 1.6e-31 141.4 243 35.8
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 4.4e-21 106.7 112 50.9
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 7.6e-21 105.9 115 53.9
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 5.4e-19 99.8 346 27.5
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.2e-18 98.6 146 46.6
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 2.7e-18 97.4 103 52.4
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 6.6e-17 92.8 342 27.5
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 5.6e-16 89.7 94 53.2
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 1.3e-07 62.0 36 75.0


User provided reference genes

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