Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0057s0040 Medicago truncatula HOM05D000096 ORTHO05D000045 4.8e-70 267.7 134 100.0
Medtr2g016390 Medicago truncatula HOM05D000096 ORTHO05D000045 8.9e-32 140.6 136 54.4
Medtr5g087830 Medicago truncatula HOM05D000096 ORTHO05D000045 1.6e-28 129.8 124 54.0
Medtr3g055445 Medicago truncatula HOM05D000096 ORTHO05D000045 1.0e-27 127.1 136 52.9
Medtr4g076760 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-27 126.3 141 49.6
Medtr7g050355 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-24 117.1 135 48.9
TPR.G20668 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-24 116.7 128 50.8
Medtr5g032840 Medicago truncatula HOM05D000096 ORTHO05D000045 1.2e-23 113.6 135 48.1
Medtr0296s0010 Medicago truncatula HOM05D000096 ORTHO05D000045 2.6e-23 112.5 136 46.3
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 3.4e-23 112.1 135 46.7
Psat7g091600 Pisum sativum HOM05D000096 ORTHO05D000045 1.9e-21 106.3 116 49.1
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 5.4e-21 104.8 136 41.9
Medtr4g062370 Medicago truncatula HOM05D000096 ORTHO05D000045 1.6e-20 103.2 135 44.4
TPR.G9555 Trifolium pratense HOM05D000096 ORTHO05D000045 1.6e-20 103.2 136 41.9
Medtr3g085530 Medicago truncatula HOM05D000096 ORTHO05D000045 7.8e-20 100.9 107 49.5
TPR.G24036 Trifolium pratense HOM05D000096 ORTHO05D009933 1.9e-18 96.3 135 40.7
Medtr8g022960 Medicago truncatula HOM05D000096 ORTHO05D000045 4.7e-17 91.7 123 41.5
Lj3g0000363 Lotus japonicus HOM05D000096 ORTHO05D000045 8.1e-17 90.9 135 38.5
Medtr6g024030 Medicago truncatula HOM05D008036 ORTHO05D000174 1.1e-16 90.5 57 70.2
TPR.G29029 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-16 90.1 113 44.2
TPR.G29994 Trifolium pratense HOM05D000096 ORTHO05D000045 4.0e-16 88.6 126 42.1
TPR.G27063 Trifolium pratense HOM05D000096 ORTHO05D000045 5.2e-16 88.2 100 50.0
Medtr1g045920 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-15 86.3 57 68.4
Medtr5g071700 Medicago truncatula HOM05D000096 ORTHO05D000045 3.4e-15 85.5 135 36.3
Medtr4g050743 Medicago truncatula HOM05D000096 ORTHO05D000045 4.4e-15 85.1 55 67.3
TPR.G15700 Trifolium pratense HOM05D000096 ORTHO05D000045 5.8e-15 84.7 106 44.3
Medtr2g047010 Medicago truncatula HOM05D000096 ORTHO05D000045 1.3e-14 83.6 55 65.5
TPR.G325 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-14 81.6 113 42.5
TPR.G21836 Trifolium pratense HOM05D000096 ORTHO05D000045 6.4e-14 81.3 98 45.9
Medtr7g070715 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-13 80.5 122 38.5
A01p15630 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-13 79.7 124 37.1
TPR.G7958 Trifolium pratense HOM05D000096 ORTHO05D000045 1.9e-13 79.7 58 65.5
ECA248G3651 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.1e-13 78.6 135 34.1
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.1e-12 76.3 137 35.0
ECA240G1019 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.0e-12 74.7 137 36.5
ECA240G2989 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.0e-12 74.7 137 33.6
Medtr7g108370 Medicago truncatula HOM05D000096 ORTHO05D000045 7.8e-12 74.3 57 57.9
C09p46800 Brassica napus HOM05D000096 ORTHO05D000045 1.0e-11 73.9 138 34.8
ECA236G4768 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-11 73.9 135 34.1
TPR.G29081 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-11 73.9 102 41.2
Medtr2g008505 Medicago truncatula HOM05D000096 ORTHO05D000045 1.3e-11 73.6 116 37.9
A06p18180 Brassica napus HOM05D000096 ORTHO05D000045 3.0e-11 72.4 138 33.3
Medtr1g057360 Medicago truncatula HOM05D000096 ORTHO05D000045 3.0e-11 72.4 123 35.0
TWI09G0899 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 3.0e-11 72.4 135 33.3
A04p10230 Brassica napus HOM05D000096 ORTHO05D000045 3.9e-11 72.0 138 33.3
ECA234G1035 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.9e-11 72.0 137 30.7
PGSC0003DMG400033371 Solanum tuberosum HOM05D000096 ORTHO05D000045 3.9e-11 72.0 136 33.1
TPR.G1802 Trifolium pratense HOM05D000096 ORTHO05D000045 3.9e-11 72.0 135 37.0
TWI59G0798 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 8.6e-11 70.9 121 34.7
Medtr4g115110 Medicago truncatula HOM05D000096 ORTHO05D000045 1.1e-10 70.5 41 78.0
ECA236G5075 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-10 69.7 133 35.3
ECA238G1785 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.3e-10 68.9 138 33.3
TPR.G15816 Trifolium pratense HOM05D000096 ORTHO05D000045 3.3e-10 68.9 135 31.1
HanXRQChr03g0061461 Helianthus annuus HOM05D000096 ORTHO05D000045 4.3e-10 68.6 137 32.1
Medtr6g024100 Medicago truncatula HOM05D000096 ORTHO05D000045 4.3e-10 68.6 97 43.3
ECA236G4162 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-10 68.2 135 31.1
Medtr8g019090 Medicago truncatula HOM05D000096 ORTHO05D000045 7.3e-10 67.8 123 34.1
TPR.G17918 Trifolium pratense HOM05D000096 ORTHO05D000045 9.6e-10 67.4 135 31.9
BolC7t45260H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-09 67.0 136 33.8
Lj4g0008839 Lotus japonicus HOM05D000096 ORTHO05D000045 1.2e-09 67.0 135 32.6
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-09 66.6 138 32.6
ECA240G0922 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.6e-09 66.6 138 32.6
A03p66090 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-09 65.9 136 34.6
C09p38880 Brassica napus HOM05D000096 ORTHO05D000045 2.8e-09 65.9 138 31.2
BolC2t08343H Brassica oleracea HOM05D000096 ORTHO05D000045 2.8e-09 65.9 136 33.8
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.8e-09 65.9 137 31.4
C03p65010 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-09 65.5 138 31.9
ECA240G2292 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-09 65.5 136 34.6
A01p21800 Brassica napus HOM05D000096 ORTHO05D000045 6.2e-09 64.7 138 31.2
ECA233G3752 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.2e-09 64.7 138 31.2
Medtr7g022020 Medicago truncatula HOM05D000096 ORTHO05D000045 6.2e-09 64.7 136 33.1
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 6.2e-09 64.7 136 34.6
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 6.2e-09 64.7 136 34.6
TPR.G15077 Trifolium pratense HOM05D000096 ORTHO05D000045 6.2e-09 64.7 135 31.1
C02p40460 Brassica napus HOM05D000096 ORTHO05D000045 8.1e-09 64.3 138 31.2
LjContig00141g0020716 Lotus japonicus HOM05D000096 ORTHO05D000045 8.1e-09 64.3 133 36.1
PGSC0003DMG400005510 Solanum tuberosum HOM05D000096 ORTHO05D000045 8.1e-09 64.3 136 31.6
Prupe.6G165800 Prunus persica HOM05D000096 ORTHO05D000045 1.1e-08 63.9 122 33.6
A08p07710 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-08 63.5 138 31.2
CARHR117380 Cardamine hirsuta HOM05D000096 ORTHO05D000045 1.4e-08 63.5 119 37.0
ECA248G3078 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-08 63.5 135 28.1
Medtr4g120080 Medicago truncatula HOM05D000096 ORTHO05D000045 1.4e-08 63.5 116 35.3
TPR.G27355 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-08 63.5 120 35.0
Medtr1g081340 Medicago truncatula HOM05D000096 ORTHO05D000045 1.8e-08 63.2 112 34.8
C02p13330 Brassica napus HOM05D000096 ORTHO05D000045 2.4e-08 62.8 138 30.4
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.4e-08 62.8 102 36.3
ECA238G2772 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.4e-08 62.8 137 30.7
ECA246G2676 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.4e-08 62.8 136 30.1
C01p17350 Brassica napus HOM05D000096 ORTHO05D000045 3.1e-08 62.4 136 32.4
Medtr4g078000 Medicago truncatula HOM05D000096 ORTHO05D000045 3.1e-08 62.4 37 70.3
BolC5t32141H Brassica oleracea HOM05D000096 ORTHO05D000045 4.0e-08 62.0 136 32.4
ECA233G5106 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.0e-08 62.0 128 32.0
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.0e-08 62.0 135 30.4
ECA232G0939 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-08 61.6 138 29.7
ECA232G2437 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-08 61.6 135 29.6
TPR.G1822 Trifolium pratense HOM05D000096 ORTHO05D000045 5.2e-08 61.6 118 33.9
TPR.G33050 Trifolium pratense HOM05D000096 ORTHO05D000045 5.2e-08 61.6 139 28.8
CARHR115010 Cardamine hirsuta HOM05D000096 ORTHO05D000045 6.8e-08 61.2 137 32.1
ECA233G4118 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-08 61.2 114 36.0
ECA234G0183 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-08 61.2 138 31.2
Glyma.16G109000 Glycine max HOM05D000096 ORTHO05D000045 6.8e-08 61.2 135 34.8
Medtr7g027013 Medicago truncatula HOM05D000096 ORTHO05D000045 6.8e-08 61.2 123 35.0
C07p01270 Brassica napus HOM05D000096 ORTHO05D000045 8.9e-08 60.8 138 31.2
C07p14850 Brassica napus HOM05D000096 ORTHO05D000045 8.9e-08 60.8 138 30.4
CARHR119350 Cardamine hirsuta HOM05D000096 ORTHO05D000045 8.9e-08 60.8 141 33.3
Glyma.18G152100 Glycine max HOM05D000096 ORTHO05D000045 8.9e-08 60.8 131 32.8
Medtr2g068990 Medicago truncatula HOM05D000096 ORTHO05D000045 8.9e-08 60.8 121 32.2
Medtr2g089470 Medicago truncatula HOM05D000096 ORTHO05D000045 8.9e-08 60.8 121 32.2
Medtr4g096800 Medicago truncatula HOM05D000096 ORTHO05D000045 8.9e-08 60.8 116 34.5
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-08 60.8 135 31.1
AUR62003917 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.2e-07 60.5 112 33.9
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-07 60.5 135 29.6
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-07 60.5 136 30.1
Glyma.09G080200 Glycine max HOM05D000096 ORTHO05D000045 1.2e-07 60.5 134 35.1
Medtr7g034270 Medicago truncatula HOM05D000096 ORTHO05D000045 1.2e-07 60.5 116 33.6
TPR.G18343 Trifolium pratense HOM05D000096 ORTHO05D000045 1.2e-07 60.5 135 33.3
BolC3t17976H Brassica oleracea HOM05D000096 ORTHO05D000045 1.5e-07 60.1 127 29.9
ECA233G3690 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-07 60.1 133 30.1
ECA238G3823 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.5e-07 60.1 137 29.9
TPR.G21913 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-07 60.1 135 31.9
CARHR214330 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.0e-07 59.7 141 33.3
Medtr1g012040 Medicago truncatula HOM05D000096 ORTHO05D000045 2.0e-07 59.7 115 34.8
Lj1g0025291 Lotus japonicus HOM05D000096 ORTHO05D000045 2.6e-07 59.3 135 30.4
TPR.G8666 Trifolium pratense HOM05D000096 ORTHO05D000045 2.6e-07 59.3 118 34.7
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.4e-07 58.9 136 30.9
ECA248G3105 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.4e-07 58.9 108 32.4
Glyma.12G111300 Glycine max HOM05D000096 ORTHO05D000045 3.4e-07 58.9 145 33.8
Lalb_Chr03g0030761 Lupinus albus HOM05D000096 ORTHO05D000045 3.4e-07 58.9 133 36.1
PSO063G0241 Papaver somniferum HOM05D000096 ORTHO05D000045 3.4e-07 58.9 140 32.1
TPR.G14820 Trifolium pratense HOM05D000096 ORTHO05D000045 3.4e-07 58.9 133 32.3
TPR.G1726 Trifolium pratense HOM05D000096 ORTHO05D000045 3.4e-07 58.9 119 33.6
ECA248G1927 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.4e-07 58.5 137 29.9
Lj5g0016408 Lotus japonicus HOM05D000096 ORTHO05D000045 4.4e-07 58.5 135 31.9
PSO478G4227 Papaver somniferum HOM05D000096 ORTHO05D000045 4.4e-07 58.5 140 31.4
PSO675G3761 Papaver somniferum HOM05D000096 ORTHO05D000045 4.4e-07 58.5 148 32.4
COL.COLO4_14941 Corchorus olitorius HOM05D000096 ORTHO05D000045 5.8e-07 58.2 141 32.6
ECA233G0405 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.8e-07 58.2 123 31.7
ECA238G0181 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.8e-07 58.2 135 30.4
ECA238G3552 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.8e-07 58.2 101 34.7
Glyma.15G193800 Glycine max HOM05D000096 ORTHO05D000045 5.8e-07 58.2 101 36.6
TPR.G34078 Trifolium pratense HOM05D000096 ORTHO05D000045 5.8e-07 58.2 135 29.6
C07p01720 Brassica napus HOM05D000096 ORTHO05D000045 7.6e-07 57.8 138 30.4
Carub.0045s0003 Capsella rubella HOM05D000096 ORTHO05D000045 7.6e-07 57.8 124 33.9
Glyma.01G135100 Glycine max HOM05D000096 ORTHO05D000045 7.6e-07 57.8 129 34.9
Glyma.19G051300 Glycine max HOM05D000096 ORTHO05D000045 7.6e-07 57.8 136 33.8
Medtr6g029550 Medicago truncatula HOM05D000096 ORTHO05D000045 7.6e-07 57.8 117 32.5
PSO017G5232 Papaver somniferum HOM05D000096 ORTHO05D000045 7.6e-07 57.8 142 33.1
TPR.G14904 Trifolium pratense HOM05D000096 ORTHO05D000045 7.6e-07 57.8 118 31.4
TPR.G38580 Trifolium pratense HOM05D000096 ORTHO05D000045 7.6e-07 57.8 135 29.6
Glyma.04G116000 Glycine max HOM05D000096 ORTHO05D000045 9.9e-07 57.4 136 33.1
Medtr3g045160 Medicago truncatula HOM05D000096 ORTHO05D000045 1.3e-06 57.0 37 64.9
TPR.G27218 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-06 57.0 120 30.0
C03p86030 Brassica napus HOM05D000096 ORTHO05D000045 1.7e-06 56.6 140 31.4
C05p53240 Brassica napus HOM05D000096 ORTHO05D005277 1.7e-06 56.6 58 48.3
BolC3t20895H Brassica oleracea HOM05D000096 ORTHO05D000045 1.7e-06 56.6 140 31.4
ECA233G3334 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-06 56.6 133 27.8
Glyma.09G061100 Glycine max HOM05D000096 ORTHO05D000045 1.7e-06 56.6 139 33.1
Medtr3g100990 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-06 56.6 129 27.9
Medtr4g037500 Medicago truncatula HOM05D000096 ORTHO05D000045 1.7e-06 56.6 112 34.8
Potri.001G165240 Populus trichocarpa HOM05D000096 ORTHO05D000045 1.7e-06 56.6 137 26.3
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 1.7e-06 56.6 135 30.4
TPR.G15922 Trifolium pratense HOM05D000096 ORTHO05D000045 1.7e-06 56.6 135 32.6
C09p17550 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-06 56.2 58 48.3
ECA234G1049 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.2e-06 56.2 135 29.6
TPR.G17757 Trifolium pratense HOM05D000096 ORTHO05D000045 2.2e-06 56.2 135 28.9
C05p31280 Brassica napus HOM05D000096 ORTHO05D000045 2.9e-06 55.8 163 29.4
CARHR217880 Cardamine hirsuta HOM05D000096 ORTHO05D000045 2.9e-06 55.8 122 34.4
COL.COLO4_14940 Corchorus olitorius HOM05D000096 ORTHO05D000045 2.9e-06 55.8 122 33.6
Medtr7g031700 Medicago truncatula HOM05D000096 ORTHO05D000045 2.9e-06 55.8 96 37.5
Potri.003G004501 Populus trichocarpa HOM05D000096 ORTHO05D000045 2.9e-06 55.8 135 26.7
TPR.G5776 Trifolium pratense HOM05D000096 ORTHO05D000045 2.9e-06 55.8 136 30.9
CARHR217860 Cardamine hirsuta HOM05D000096 ORTHO05D000045 3.8e-06 55.5 126 33.3
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-06 55.5 135 29.6
Medtr5g061500 Medicago truncatula HOM05D000096 ORTHO05D000045 3.8e-06 55.5 112 33.9
PSO801G0345 Papaver somniferum HOM05D000096 ORTHO05D000045 3.8e-06 55.5 95 32.6
Sp7g01850 Schrenkiella parvula HOM05D000096 ORTHO05D000045 3.8e-06 55.5 57 47.4
C02p27670 Brassica napus HOM05D000096 ORTHO05D000045 4.9e-06 55.1 58 46.6
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.9e-06 55.1 113 32.7
Glyma.07G160600 Glycine max HOM05D000096 ORTHO05D000045 4.9e-06 55.1 135 32.6
Medtr5g032940 Medicago truncatula HOM05D000096 ORTHO05D000045 4.9e-06 55.1 112 34.8
Potri.009G002650 Populus trichocarpa HOM05D000096 ORTHO05D000045 4.9e-06 55.1 135 25.9
TPR.G14299 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-06 55.1 137 30.7
Medtr3g030470 Medicago truncatula HOM05D000096 ORTHO05D000045 6.4e-06 54.7 58 51.7
PSO478G0170 Papaver somniferum HOM05D000096 ORTHO05D000045 6.4e-06 54.7 138 31.9
PSO591G0252 Papaver somniferum HOM05D000096 ORTHO05D000045 6.4e-06 54.7 140 30.0
C09p23300 Brassica napus HOM05D000096 ORTHO05D000045 8.4e-06 54.3 58 46.6
CANSAT21G2191 Cannabis sativa HOM05D000096 ORTHO05D000045 8.4e-06 54.3 137 29.9
CARHR217630 Cardamine hirsuta HOM05D000096 ORTHO05D000045 8.4e-06 54.3 107 32.7
ECA246G2079 Erigeron canadensis HOM05D000006 ORTHO05D000045 8.4e-06 54.3 108 32.4
Medtr3g085980 Medicago truncatula HOM05D000096 ORTHO05D000045 8.4e-06 54.3 59 50.8
Medtr8g045705 Medicago truncatula HOM05D000096 ORTHO05D000045 8.4e-06 54.3 123 26.0
TPR.G25805 Trifolium pratense HOM05D000096 ORTHO05D000045 8.4e-06 54.3 118 31.4
TPR.G38454 Trifolium pratense HOM05D004863 ORTHO05D005802 8.4e-06 54.3 135 30.4


User provided reference genes

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