Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Medtr0002s0960 Medicago truncatula HOM05D005194 ORTHO05D000044 7.4e-101 370.5 189 100.0
Medtr7g028855 Medicago truncatula HOM05D005194 ORTHO05D009139 5.1e-17 92.0 68 66.2
Rhsim07G0159100 Rhododendron simsii HOM05D000045 ORTHO05D009425 2.6e-13 79.7 76 52.6
RcHm_v2.0_Chr7g0239101 Rosa chinensis HOM05D000047 ORTHO05D000044 5.8e-13 78.6 90 45.6
RcHm_v2.0_Chr5g0038141 Rosa chinensis HOM05D000047 ORTHO05D000044 2.9e-12 76.3 90 44.4
Rhsim01G0085000 Rhododendron simsii HOM05D008652 ORTHO05D010516 3.8e-12 75.9 87 47.1
TWI09G1598 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.4e-11 73.9 92 41.3
TWI60G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.7e-10 69.7 78 43.6
TWI32G0129 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 7.9e-10 68.2 72 50.0
TWI39G0933 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 2.3e-09 66.6 92 40.2
TWI15G0996 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.7e-09 65.1 81 40.7
BolC3t18154H Brassica oleracea HOM05D000047 ORTHO05D000044 1.9e-08 63.5 91 38.5
FvH4_6g45122 Fragaria vesca HOM05D000047 ORTHO05D000044 2.5e-08 63.2 88 35.2
Sopen02g012060 Solanum pennellii HOM05D000047 ORTHO05D000044 5.7e-08 62.0 85 34.1
Nn1g09953 Nelumbo nucifera HOM05D000047 ORTHO05D000044 7.4e-08 61.6 89 39.3
Nn1g10164 Nelumbo nucifera HOM05D000047 ORTHO05D000044 7.4e-08 61.6 89 39.3
Rhsim02G0128300 Rhododendron simsii HOM05D001201 ORTHO05D001100 7.4e-08 61.6 84 39.3
PSO210G5419 Papaver somniferum HOM05D000047 ORTHO05D000044 9.7e-08 61.2 104 36.5
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 9.7e-08 61.2 85 32.9
Sopen06g012950 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-08 61.2 85 35.3
PSO339G3235 Papaver somniferum HOM05D000047 ORTHO05D000044 1.3e-07 60.8 84 39.3
Rhsim04G0187600 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.3e-07 60.8 84 39.3
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-07 60.8 85 34.1
Sopen12g016380 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-07 60.8 85 35.3
Rhsim12G0034600 Rhododendron simsii HOM05D000047 ORTHO05D000044 1.6e-07 60.5 84 38.1
Oeu050121.1 Olea europaea HOM05D000047 ORTHO05D000044 2.2e-07 60.1 84 40.5
Rhsim01G0158600 Rhododendron simsii HOM05D012502 ORTHO05D000044 2.2e-07 60.1 107 34.6
Sopen05g018910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-07 60.1 85 34.1
Sopen09g009060 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-07 60.1 85 34.1
CANSAT56G3992 Cannabis sativa HOM05D000047 ORTHO05D000044 2.8e-07 59.7 84 40.5
FvH4_3g31361 Fragaria vesca HOM05D000047 ORTHO05D000044 2.8e-07 59.7 82 41.5
RcHm_v2.0_Chr2g0102771 Rosa chinensis HOM05D000047 ORTHO05D000044 2.8e-07 59.7 64 46.9
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 2.8e-07 59.7 85 36.5
Sopen07g005350 Solanum pennellii HOM05D000047 ORTHO05D000589 2.8e-07 59.7 85 34.1
FvH4_4g05722 Fragaria vesca HOM05D000047 ORTHO05D000044 3.7e-07 59.3 90 37.8
PSO832G0570 Papaver somniferum HOM05D000047 ORTHO05D000044 3.7e-07 59.3 83 34.9
Sopen12g018760 Solanum pennellii HOM05D000047 ORTHO05D000044 3.7e-07 59.3 85 35.3
TWI39G0526 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 3.7e-07 59.3 67 38.8
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 6.3e-07 58.5 82 40.2
PSO339G1945 Papaver somniferum HOM05D000047 ORTHO05D000044 6.3e-07 58.5 86 39.5
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 6.3e-07 58.5 85 35.3
Sopen03g011520 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-07 58.5 85 34.1
Sopen10g024660 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-07 58.5 85 34.1
Sopen12g015300 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-07 58.5 85 34.1
CANSAT54G0884 Cannabis sativa HOM05D000047 ORTHO05D000044 8.2e-07 58.2 83 42.2
AUR62040546 Chenopodium quinoa HOM05D000047 ORTHO05D000044 8.2e-07 58.2 85 38.8
Sopen05g013770 Solanum pennellii HOM05D000047 ORTHO05D000589 8.2e-07 58.2 85 34.1
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 8.2e-07 58.2 82 36.6
CANSAT25G0149 Cannabis sativa HOM05D000047 ORTHO05D000044 1.1e-06 57.8 93 39.8
Manes.10G076111 Manihot esculenta HOM05D000047 ORTHO05D000352 1.1e-06 57.8 79 40.5
Rhsim05G0112700 Rhododendron simsii HOM05D000981 ORTHO05D000845 1.1e-06 57.8 86 36.0
Sopen02g001740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.8 85 34.1
Sopen04g027750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.8 85 34.1
Sopen06g007770 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.8 85 34.1
Sopen11g018660 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.8 85 30.6
Sopen12g011360 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.8 85 34.1
Sopen01g019640 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
Sopen04g026920 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 62 38.7
Sopen06g011500 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
Sopen07g005450 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 32.9
Sopen08g006310 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 84 34.5
Sopen09g009160 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
Sopen10g014420 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
Sopen11g013030 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-06 57.4 85 34.1
CSS0035830 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 1.8e-06 57.0 59 45.8
Hma1.2p1_0161F.1_g071400 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 35.7
Hma1.2p1_0321F.1_g124153 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 35.7
Hma1.2p1_2553F.1_g324343 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 35.7
PSO675G6116 Papaver somniferum HOM05D000047 ORTHO05D000044 1.8e-06 57.0 83 33.7
Sopen04g014040 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 33.3
Sopen05g022380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 85 34.1
TWI53G1469 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 36.9
TWI75G0659 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 60 51.7
TWI81G0360 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 82 35.4
TWI81G0361 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.8e-06 57.0 84 36.9
AUR62027595 Chenopodium quinoa HOM05D000047 ORTHO05D000044 2.4e-06 56.6 93 37.6
Hma1.2p1_0900F.1_g234540 Hydrangea macrophylla HOM05D000047 ORTHO05D000044 2.4e-06 56.6 84 35.7
QL93p0205_0258 Quercus lobata HOM05D000047 ORTHO05D000044 2.4e-06 56.6 83 37.3
Sopen03g017560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.6 78 35.9
Sopen04g014710 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.6 85 32.9
Sopen06g009430 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.6 85 34.1
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.6 85 30.6
Sopen09g010970 Solanum pennellii HOM05D000014 ORTHO05D000093 2.4e-06 56.6 78 35.9
Medtr6g033990 Medicago truncatula HOM05D005194 ORTHO05D009139 3.1e-06 56.2 72 43.1
Rhsim11G0065500 Rhododendron simsii HOM05D000047 ORTHO05D000044 3.1e-06 56.2 86 36.0
Sopen03g016130 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 56.2 87 36.8
Sopen12g023010 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 56.2 85 32.9
CSS0039284 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 4.1e-06 55.8 59 44.1
Ca_12988_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.1e-06 55.8 84 41.7
Medtr7g066620 Medicago truncatula HOM05D000311 ORTHO05D000183 4.1e-06 55.8 73 45.2
Oeu045275.3 Olea europaea HOM05D000047 ORTHO05D000044 4.1e-06 55.8 92 40.2
PSO210G5806 Papaver somniferum HOM05D000047 ORTHO05D000044 4.1e-06 55.8 84 39.3
Sopen01g024330 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-06 55.8 85 34.1
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 4.1e-06 55.8 93 35.5
Sopen08g015090 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-06 55.8 85 32.9
Sopen08g017450 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-06 55.8 85 32.9
Sopen10g018840 Solanum pennellii HOM05D000047 ORTHO05D001383 4.1e-06 55.8 84 35.7
BcaC06g35664 Brassica carinata HOM05D000415 ORTHO05D002017 5.3e-06 55.5 76 39.5
CANSAT54G1927 Cannabis sativa HOM05D000047 ORTHO05D000044 5.3e-06 55.5 87 34.5
Sopen05g027180 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.5 85 32.9
Sopen05g027550 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.5 85 32.9
Sopen05g029200 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.5 85 34.1
Sopen11g015550 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.5 85 31.8
Sopen11g023380 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.5 85 34.1
CSS0043586 Camellia sinensis var. sinensis HOM05D000047 ORTHO05D000044 6.9e-06 55.1 59 45.8
Manes.14G150650 Manihot esculenta HOM05D000047 ORTHO05D000044 6.9e-06 55.1 79 39.2
PSO339G3174 Papaver somniferum HOM05D000047 ORTHO05D000044 6.9e-06 55.1 86 38.4
Sopen00g007300 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 87 36.8
Sopen01g012890 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 67 43.3
Sopen01g024430 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 85 34.1
Sopen02g001660 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 85 32.9
Sopen02g019120 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 85 32.9
Sopen04g020160 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 89 36.0
Sopen05g014250 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 84 34.5
Sopen06g010190 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 85 32.9
Sopen11g020120 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 87 36.8
Sopen12g018280 Solanum pennellii HOM05D000047 ORTHO05D000044 6.9e-06 55.1 84 34.5
BcaB01g00711 Brassica carinata HOM05D000047 ORTHO05D000044 9.0e-06 54.7 91 31.9
BcaC05g28696 Brassica carinata HOM05D000047 ORTHO05D000044 9.0e-06 54.7 69 40.6
QL11p049215 Quercus lobata HOM05D000047 ORTHO05D000044 9.0e-06 54.7 83 37.3
Sopen02g003560 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 35.3
Sopen03g008380 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 32.9
Sopen04g012740 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 34.1
Sopen05g010710 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 32.9
Sopen05g010730 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 32.9
Sopen06g009440 Solanum pennellii HOM05D000002 ORTHO05D000001 9.0e-06 54.7 89 33.7
Sopen08g023600 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 32.9
Sopen10g015880 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 87 36.8
Sopen11g017540 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 67 40.3
Sopen12g021520 Solanum pennellii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 94 29.8
TWI81G0819 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 9.0e-06 54.7 85 36.5


User provided reference genes

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