Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly4043s0001 Marchantia polymorpha HOM05D000580 ORTHO05D001785 2.8e-51 204.9 98 100.0
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 1.6e-46 189.1 94 94.7
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 2.1e-46 188.7 94 94.7
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 2.1e-46 188.7 94 94.7
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 2.1e-46 188.7 94 94.7
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 2.1e-46 188.7 94 94.7
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-46 188.7 94 94.7
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 2.7e-46 188.3 94 93.6
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 4.6e-46 187.6 91 96.7
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 4.6e-46 187.6 94 94.7
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.1e-46 187.2 94 93.6
BolSC49t61166H Brassica oleracea HOM05D000580 ORTHO05D001785 7.9e-46 186.8 93 94.6
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.9e-46 186.8 94 92.6
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 3.0e-45 184.9 94 93.6
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.0e-45 184.9 94 93.6
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 3.9e-45 184.5 94 92.6
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 8.7e-45 183.3 94 91.5
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.1e-44 183.0 94 91.5
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.5e-44 181.8 94 92.6
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 1.6e-43 179.1 94 89.4
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 3.7e-43 177.9 94 91.5
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 6.3e-43 177.2 94 90.4
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 6.3e-43 177.2 94 90.4
HanXRQChr13g0395721 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-42 176.4 85 95.3
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 2.4e-42 175.3 94 85.1
HanXRQChr10g0283661 Helianthus annuus HOM05D000580 ORTHO05D001785 3.1e-42 174.9 87 92.0
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 1.5e-41 172.6 83 98.8
Gorai.009G350200 Gossypium raimondii HOM05D000580 ORTHO05D001785 3.8e-40 167.9 80 96.2
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 5.0e-40 167.5 83 95.2
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.5e-40 167.2 83 95.2
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 6.5e-40 167.2 83 95.2
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 6.5e-40 167.2 83 95.2
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 1.4e-39 166.0 94 85.1
Potri.013G088900 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.9e-39 165.6 91 86.8
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 3.2e-39 164.9 83 94.0
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.2e-38 162.9 83 92.8
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.2e-38 162.9 83 92.8
Glyma.15G114600 Glycine max HOM05D000580 ORTHO05D001785 1.4e-37 159.5 83 90.4
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 6.7e-37 157.1 83 90.4
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.5e-36 156.0 78 91.0
Gorai.007G064400 Gossypium raimondii HOM05D000580 ORTHO05D001785 7.4e-36 153.7 82 87.8
CAN.G1185.3 Capsicum annuum HOM05D000580 ORTHO05D001785 1.3e-35 152.9 82 87.8
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.4e-34 149.4 76 94.7
Eucgr.E04205 Eucalyptus grandis HOM05D000580 ORTHO05D001785 1.8e-34 149.1 76 89.5
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 7.2e-31 137.1 99 73.7
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 1.6e-30 136.0 94 73.4
BNapus_Darmor_BZH_scaffold_253p00320 Brassica napus HOM05D000580 ORTHO05D001785 4.7e-30 134.4 64 95.3
HanXRQChr17g0570211 Helianthus annuus HOM05D000580 ORTHO05D001785 6.1e-30 134.0 68 91.2
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-29 132.5 65 93.8
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.0e-28 129.0 74 81.1
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 2.0e-28 129.0 68 94.1
BolSC29t60630H Brassica oleracea HOM05D000580 ORTHO05D001785 3.7e-27 124.8 59 94.9
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 6.3e-27 124.0 94 70.2
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 5.3e-26 120.9 94 69.1
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 9.1e-26 120.2 75 81.3
Solyc01g017430.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.2e-25 119.8 91 65.9
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.0e-25 119.0 94 68.1
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 5.9e-25 117.5 62 93.5
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 2.2e-24 115.5 69 84.1
Lalb_Chr18g0049341 Lupinus albus HOM05D000580 ORTHO05D001785 2.9e-24 115.2 68 77.9
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 8.5e-24 113.6 63 87.3
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.5e-23 112.8 70 82.9
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.9e-23 112.5 69 81.2
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.9e-23 112.5 69 81.2
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 2.5e-23 112.1 60 90.0
BolSC46t61017H Brassica oleracea HOM05D000580 ORTHO05D001785 4.2e-23 111.3 64 85.9
Carub.0006s2563 Capsella rubella HOM05D000580 ORTHO05D001785 9.4e-23 110.2 52 96.2
Lalb_Chr03g0039291 Lupinus albus HOM05D000580 ORTHO05D001785 1.0e-21 106.7 57 86.0
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 2.3e-21 105.5 66 80.3
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 6.7e-21 104.0 94 61.7
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 2.0e-20 102.4 66 74.2
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.7e-20 100.9 52 94.2
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 5.7e-20 100.9 52 94.2
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 7.4e-20 100.5 52 92.3
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 2.8e-19 98.6 51 94.1
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 2.8e-19 98.6 53 90.6
BraSC103t45481Z Brassica rapa HOM05D000580 ORTHO05D001785 1.4e-18 96.3 49 91.8
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-17 93.2 47 93.6
Ciclev10003610m.g Citrus clementina HOM05D000580 ORTHO05D001785 1.6e-17 92.8 49 89.8
arahy.Tifrunner.gnm1.ann1.BY1G47 Arachis hypogaea HOM05D000743 ORTHO05D001785 3.5e-17 91.7 47 91.5
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 2.9e-16 88.6 41 97.6
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 8.5e-16 87.0 44 93.2
HanXRQChr05g0152591 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-15 86.7 44 93.2
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-15 86.7 44 93.2
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-15 86.7 44 93.2
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.1e-15 86.7 44 93.2
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 1.1e-15 86.7 44 93.2
HanXRQChr16g0529051 Helianthus annuus HOM05D000580 ORTHO05D001785 3.2e-15 85.1 44 90.9
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 7.2e-15 84.0 44 88.6
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-14 83.2 44 88.6
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 2.1e-14 82.4 47 83.0
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 4.7e-14 81.3 45 80.0
Lsat_1_v5_gn_8_161300 Lactuca sativa HOM05D000580 ORTHO05D001785 1.0e-13 80.1 73 58.9
BolC7t41712H Brassica oleracea HOM05D000580 ORTHO05D001785 2.2e-11 72.4 30 96.7
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 5.4e-10 67.8 36 88.9
Lalb_Chr18g0049681 Lupinus albus HOM05D000580 ORTHO05D001785 3.5e-09 65.1 44 75.0
Medtr2g021500 Medicago truncatula HOM05D000580 ORTHO05D001785 7.7e-09 63.9 51 62.7
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.3e-08 63.2 41 75.6
CAN.G77.5 Capsicum annuum HOM05D000580 ORTHO05D001785 1.2e-06 56.6 28 85.7


User provided reference genes

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